Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 U6.58-201ENST00000613107 107 ntBASIC-0.33□□□□□ -2.46
ERCC4Q92889 SNORD114-11-201ENST00000363738 75 ntBASIC-0.34□□□□□ -2.46
ERCC4Q92889 RNU6-122P-201ENST00000516818 107 ntBASIC-0.34□□□□□ -2.46
ERCC4Q92889 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.35□□□□□ -2.47
ERCC4Q92889 MIR429-201ENST00000362106 83 ntBASIC-0.36□□□□□ -2.47
ERCC4Q92889 RNU6-924P-201ENST00000362926 108 ntBASIC-0.36□□□□□ -2.47
ERCC4Q92889 MIR101-1-201ENST00000362265 75 ntBASIC-0.37□□□□□ -2.47
ERCC4Q92889 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.37□□□□□ -2.47
ERCC4Q92889 SNORA13-201ENST00000458790 133 ntBASIC-0.37□□□□□ -2.47
ERCC4Q92889 RNU6-940P-201ENST00000363433 104 ntBASIC-0.38□□□□□ -2.47
ERCC4Q92889 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.38□□□□□ -2.47
ERCC4Q92889 MIR124-2-201ENST00000385081 109 ntBASIC-0.38□□□□□ -2.47
ERCC4Q92889 MIR518B-201ENST00000385127 83 ntBASIC-0.38□□□□□ -2.47
ERCC4Q92889 RNU6-788P-201ENST00000390967 104 ntBASIC-0.38□□□□□ -2.47
ERCC4Q92889 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.38□□□□□ -2.47
ERCC4Q92889 RNA5SP451-201ENST00000410588 110 ntBASIC-0.39□□□□□ -2.47
ERCC4Q92889 AC125388.1-201ENST00000459631 156 ntBASIC-0.39□□□□□ -2.47
ERCC4Q92889 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
ERCC4Q92889 RNA5SP169-201ENST00000517268 117 ntBASIC-0.4□□□□□ -2.47
ERCC4Q92889 RPS29P8-201ENST00000445109 171 ntBASIC-0.41□□□□□ -2.48
ERCC4Q92889 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.42□□□□□ -2.48
ERCC4Q92889 SNORD22.1-201ENST00000516331 125 ntBASIC-0.42□□□□□ -2.48
ERCC4Q92889 U7.5-201ENST00000517224 61 ntBASIC-0.42□□□□□ -2.48
ERCC4Q92889 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
ERCC4Q92889 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.44□□□□□ -2.48
ERCC4Q92889 RNA5SP67-201ENST00000516422 131 ntBASIC-0.44□□□□□ -2.48
ERCC4Q92889 SNORD1B-201ENST00000363091 84 ntBASIC-0.45□□□□□ -2.48
ERCC4Q92889 RNU6-598P-201ENST00000364017 105 ntBASIC-0.45□□□□□ -2.48
ERCC4Q92889 MIR224-201ENST00000384889 81 ntBASIC-0.45□□□□□ -2.48
ERCC4Q92889 MIR204-201ENST00000385200 110 ntBASIC-0.45□□□□□ -2.48
ERCC4Q92889 RNU6-696P-201ENST00000390834 107 ntBASIC-0.45□□□□□ -2.48
ERCC4Q92889 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
ERCC4Q92889 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.46□□□□□ -2.48
ERCC4Q92889 SNORD75.1-201ENST00000408373 60 ntBASIC-0.46□□□□□ -2.48
ERCC4Q92889 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.46□□□□□ -2.48
ERCC4Q92889 MIR466-201ENST00000580653 84 ntBASIC-0.46□□□□□ -2.48
ERCC4Q92889 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.47□□□□□ -2.48
ERCC4Q92889 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
ERCC4Q92889 MIR3179-1-201ENST00000578940 84 ntBASIC-0.47□□□□□ -2.48
ERCC4Q92889 MIR3179-2-201ENST00000579107 84 ntBASIC-0.47□□□□□ -2.48
ERCC4Q92889 MIR3179-3-201ENST00000579566 84 ntBASIC-0.47□□□□□ -2.48
ERCC4Q92889 MIR3179-4-201ENST00000617599 84 ntBASIC-0.47□□□□□ -2.48
ERCC4Q92889 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.48□□□□□ -2.49
ERCC4Q92889 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
ERCC4Q92889 MIR3938-201ENST00000582157 103 ntBASIC-0.48□□□□□ -2.49
ERCC4Q92889 AL627230.5-201ENST00000619807 58 ntBASIC-0.48□□□□□ -2.49
ERCC4Q92889 SNORD95.1-201ENST00000364099 68 ntBASIC-0.49□□□□□ -2.49
ERCC4Q92889 RNU7-88P-201ENST00000458752 63 ntBASIC-0.49□□□□□ -2.49
ERCC4Q92889 SNORD18.2-201ENST00000459604 70 ntBASIC-0.49□□□□□ -2.49
ERCC4Q92889 RNU6-721P-201ENST00000410155 105 ntBASIC-0.5□□□□□ -2.49
ERCC4Q92889 SNORD57-201ENST00000448188 72 ntBASIC-0.5□□□□□ -2.49
ERCC4Q92889 RNU6-732P-201ENST00000516033 103 ntBASIC-0.5□□□□□ -2.49
ERCC4Q92889 RNU6-231P-201ENST00000517122 103 ntBASIC-0.52□□□□□ -2.49
ERCC4Q92889 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.52□□□□□ -2.49
ERCC4Q92889 SNORD114-14-201ENST00000362723 75 ntBASIC-0.53□□□□□ -2.49
ERCC4Q92889 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.53□□□□□ -2.49
ERCC4Q92889 MIR196A2-201ENST00000385189 110 ntBASIC-0.53□□□□□ -2.49
ERCC4Q92889 AP000533.3-201ENST00000447704 118 ntBASIC-0.53□□□□□ -2.49
ERCC4Q92889 U2.18-201ENST00000622185 84 ntBASIC-0.53□□□□□ -2.49
ERCC4Q92889 AC021146.6-201ENST00000514659 117 ntBASIC-0.54□□□□□ -2.5
ERCC4Q92889 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.54□□□□□ -2.5
ERCC4Q92889 RNU6-172P-201ENST00000411000 93 ntBASIC-0.55□□□□□ -2.5
ERCC4Q92889 SNORA26.4-201ENST00000391188 123 ntBASIC-0.56□□□□□ -2.5
ERCC4Q92889 RNU6-284P-201ENST00000411105 106 ntBASIC-0.56□□□□□ -2.5
ERCC4Q92889 SNORD63.1-201ENST00000516178 80 ntBASIC-0.56□□□□□ -2.5
ERCC4Q92889 MIR548AZ-201ENST00000616567 95 ntBASIC-0.56□□□□□ -2.5
ERCC4Q92889 SNORA32.3-201ENST00000384772 121 ntBASIC-0.57□□□□□ -2.5
ERCC4Q92889 MIR7110-201ENST00000612638 86 ntBASIC-0.57□□□□□ -2.5
ERCC4Q92889 SNORD115-33-201ENST00000363723 82 ntBASIC-0.58□□□□□ -2.5
ERCC4Q92889 MIR548AA1-201ENST00000384971 97 ntBASIC-0.58□□□□□ -2.5
ERCC4Q92889 SNORD19-201ENST00000391191 68 ntBASIC-0.58□□□□□ -2.5
ERCC4Q92889 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.59□□□□□ -2.5
ERCC4Q92889 RNU6-520P-201ENST00000384717 104 ntBASIC-0.59□□□□□ -2.5
ERCC4Q92889 RNU4-63P-201ENST00000411313 118 ntBASIC-0.59□□□□□ -2.5
ERCC4Q92889 RNU7-119P-201ENST00000459279 63 ntBASIC-0.59□□□□□ -2.5
ERCC4Q92889 SNORD114-17-201ENST00000364699 75 ntBASIC-0.62□□□□□ -2.51
ERCC4Q92889 SNORA3B-201ENST00000391305 131 ntBASIC-0.62□□□□□ -2.51
ERCC4Q92889 RNU7-151P-201ENST00000516930 53 ntBASIC-0.62□□□□□ -2.51
ERCC4Q92889 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.63□□□□□ -2.51
ERCC4Q92889 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.63□□□□□ -2.51
ERCC4Q92889 MIR7978-201ENST00000636158 59 ntBASIC-0.63□□□□□ -2.51
ERCC4Q92889 RNU6-446P-201ENST00000362827 106 ntBASIC-0.64□□□□□ -2.51
ERCC4Q92889 SNORA40.16-201ENST00000517238 121 ntBASIC-0.64□□□□□ -2.51
ERCC4Q92889 MIR3681-201ENST00000580089 72 ntBASIC-0.64□□□□□ -2.51
ERCC4Q92889 MIR4436A-201ENST00000585278 85 ntBASIC-0.64□□□□□ -2.51
ERCC4Q92889 AL353691.2-201ENST00000443795 59 ntBASIC-0.65□□□□□ -2.51
ERCC4Q92889 RNU7-160P-201ENST00000516660 62 ntBASIC-0.65□□□□□ -2.51
ERCC4Q92889 MIR409-201ENST00000362237 79 ntBASIC-0.66□□□□□ -2.52
ERCC4Q92889 SNORD116.2-201ENST00000391251 93 ntBASIC-0.66□□□□□ -2.52
ERCC4Q92889 AP002795.1-201ENST00000534879 84 ntBASIC-0.66□□□□□ -2.52
ERCC4Q92889 MIR633-201ENST00000384821 98 ntBASIC-0.67□□□□□ -2.52
ERCC4Q92889 MIR125B1-201ENST00000385236 88 ntBASIC-0.67□□□□□ -2.52
ERCC4Q92889 SNORA40B-201ENST00000385573 128 ntBASIC-0.67□□□□□ -2.52
ERCC4Q92889 RNU6-829P-201ENST00000363700 112 ntBASIC-0.68□□□□□ -2.52
ERCC4Q92889 RNU6-810P-201ENST00000364001 107 ntBASIC-0.68□□□□□ -2.52
ERCC4Q92889 MIR548AX-201ENST00000580117 73 ntBASIC-0.68□□□□□ -2.52
ERCC4Q92889 RNA5SP331-201ENST00000364986 107 ntBASIC-0.69□□□□□ -2.52
ERCC4Q92889 RNU6-499P-201ENST00000365615 107 ntBASIC-0.69□□□□□ -2.52
ERCC4Q92889 MIR579-201ENST00000385221 98 ntBASIC-0.69□□□□□ -2.52
ERCC4Q92889 AC079150.2-201ENST00000443733 78 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms