Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU6-598P-201ENST00000364017 105 ntBASIC-0.06□□□□□ -2.42
SLC44A3Q8N4M1 MIR6851-201ENST00000617060 67 ntBASIC-0.06□□□□□ -2.42
SLC44A3Q8N4M1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.07□□□□□ -2.42
SLC44A3Q8N4M1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
SLC44A3Q8N4M1 MIR214-201ENST00000385214 110 ntBASIC-0.08□□□□□ -2.42
SLC44A3Q8N4M1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
SLC44A3Q8N4M1 AL445193.1-201ENST00000441183 141 ntBASIC-0.08□□□□□ -2.42
SLC44A3Q8N4M1 MIR1295B-201ENST00000636144 60 ntBASIC-0.08□□□□□ -2.42
SLC44A3Q8N4M1 MIR409-201ENST00000362237 79 ntBASIC-0.09□□□□□ -2.42
SLC44A3Q8N4M1 SNORD95.1-201ENST00000364099 68 ntBASIC-0.09□□□□□ -2.42
SLC44A3Q8N4M1 RNU6-520P-201ENST00000384717 104 ntBASIC-0.09□□□□□ -2.42
SLC44A3Q8N4M1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.09□□□□□ -2.42
SLC44A3Q8N4M1 U7.5-201ENST00000517224 61 ntBASIC-0.09□□□□□ -2.42
SLC44A3Q8N4M1 MIR4645-201ENST00000583158 77 ntBASIC-0.09□□□□□ -2.42
SLC44A3Q8N4M1 MIR101-1-201ENST00000362265 75 ntBASIC-0.1□□□□□ -2.43
SLC44A3Q8N4M1 RNU6-172P-201ENST00000411000 93 ntBASIC-0.1□□□□□ -2.43
SLC44A3Q8N4M1 MIR3666-201ENST00000607845 111 ntBASIC-0.1□□□□□ -2.43
SLC44A3Q8N4M1 U2.18-201ENST00000622185 84 ntBASIC-0.1□□□□□ -2.43
SLC44A3Q8N4M1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.11□□□□□ -2.43
SLC44A3Q8N4M1 SNORD113-4-201ENST00000364802 75 ntBASIC-0.11□□□□□ -2.43
SLC44A3Q8N4M1 RNU6-696P-201ENST00000390834 107 ntBASIC-0.11□□□□□ -2.43
SLC44A3Q8N4M1 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.11□□□□□ -2.43
SLC44A3Q8N4M1 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.11□□□□□ -2.43
SLC44A3Q8N4M1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.11□□□□□ -2.43
SLC44A3Q8N4M1 SNORA40.16-201ENST00000517238 121 ntBASIC-0.11□□□□□ -2.43
SLC44A3Q8N4M1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.12□□□□□ -2.43
SLC44A3Q8N4M1 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
SLC44A3Q8N4M1 RNU7-119P-201ENST00000459279 63 ntBASIC-0.12□□□□□ -2.43
SLC44A3Q8N4M1 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.12□□□□□ -2.43
SLC44A3Q8N4M1 MIR7110-201ENST00000612638 86 ntBASIC-0.12□□□□□ -2.43
SLC44A3Q8N4M1 RNU6-924P-201ENST00000362926 108 ntBASIC-0.13□□□□□ -2.43
SLC44A3Q8N4M1 MIR124-2-201ENST00000385081 109 ntBASIC-0.13□□□□□ -2.43
SLC44A3Q8N4M1 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.13□□□□□ -2.43
SLC44A3Q8N4M1 SNORD57-201ENST00000448188 72 ntBASIC-0.13□□□□□ -2.43
SLC44A3Q8N4M1 RNU7-88P-201ENST00000458752 63 ntBASIC-0.13□□□□□ -2.43
SLC44A3Q8N4M1 MIR4263-201ENST00000584745 83 ntBASIC-0.13□□□□□ -2.43
SLC44A3Q8N4M1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.13□□□□□ -2.43
SLC44A3Q8N4M1 AC093726.3-201ENST00000637588 150 ntBASIC-0.14□□□□□ -2.43
SLC44A3Q8N4M1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.15□□□□□ -2.43
SLC44A3Q8N4M1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.16□□□□□ -2.44
SLC44A3Q8N4M1 SNORA40B-201ENST00000385573 128 ntBASIC-0.16□□□□□ -2.44
SLC44A3Q8N4M1 SNORD116.2-201ENST00000391251 93 ntBASIC-0.16□□□□□ -2.44
SLC44A3Q8N4M1 RPS29P8-201ENST00000445109 171 ntBASIC-0.16□□□□□ -2.44
SLC44A3Q8N4M1 RNU6-732P-201ENST00000516033 103 ntBASIC-0.16□□□□□ -2.44
SLC44A3Q8N4M1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.17□□□□□ -2.44
SLC44A3Q8N4M1 SNORD74.6-201ENST00000364796 70 ntBASIC-0.17□□□□□ -2.44
SLC44A3Q8N4M1 RNA5SP266-201ENST00000410273 108 ntBASIC-0.17□□□□□ -2.44
SLC44A3Q8N4M1 RNU6-810P-201ENST00000364001 107 ntBASIC-0.18□□□□□ -2.44
SLC44A3Q8N4M1 RNA5SP451-201ENST00000410588 110 ntBASIC-0.18□□□□□ -2.44
SLC44A3Q8N4M1 MIR7978-201ENST00000636158 59 ntBASIC-0.18□□□□□ -2.44
SLC44A3Q8N4M1 MIR4788-201ENST00000639104 80 ntBASIC-0.18□□□□□ -2.44
SLC44A3Q8N4M1 MTND4LP19-201ENST00000403051 166 ntBASIC-0.19□□□□□ -2.44
SLC44A3Q8N4M1 RNU7-151P-201ENST00000516930 53 ntBASIC-0.19□□□□□ -2.44
SLC44A3Q8N4M1 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.19□□□□□ -2.44
SLC44A3Q8N4M1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.19□□□□□ -2.44
SLC44A3Q8N4M1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.19□□□□□ -2.44
SLC44A3Q8N4M1 MIR224-201ENST00000384889 81 ntBASIC-0.2□□□□□ -2.44
SLC44A3Q8N4M1 MIR548AA1-201ENST00000384971 97 ntBASIC-0.2□□□□□ -2.44
SLC44A3Q8N4M1 MIR518B-201ENST00000385127 83 ntBASIC-0.2□□□□□ -2.44
SLC44A3Q8N4M1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
SLC44A3Q8N4M1 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.2□□□□□ -2.44
SLC44A3Q8N4M1 SNORD63.1-201ENST00000516178 80 ntBASIC-0.2□□□□□ -2.44
SLC44A3Q8N4M1 SNORD22.1-201ENST00000516331 125 ntBASIC-0.2□□□□□ -2.44
SLC44A3Q8N4M1 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.21□□□□□ -2.44
SLC44A3Q8N4M1 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.21□□□□□ -2.44
SLC44A3Q8N4M1 MIR125B1-201ENST00000385236 88 ntBASIC-0.21□□□□□ -2.44
SLC44A3Q8N4M1 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.21□□□□□ -2.44
SLC44A3Q8N4M1 MIR4490-201ENST00000582647 84 ntBASIC-0.21□□□□□ -2.44
SLC44A3Q8N4M1 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.22□□□□□ -2.44
SLC44A3Q8N4M1 MIR579-201ENST00000385221 98 ntBASIC-0.22□□□□□ -2.44
SLC44A3Q8N4M1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.22□□□□□ -2.44
SLC44A3Q8N4M1 RNU7-160P-201ENST00000516660 62 ntBASIC-0.22□□□□□ -2.44
SLC44A3Q8N4M1 MIR8064-201ENST00000612863 90 ntBASIC-0.22□□□□□ -2.44
SLC44A3Q8N4M1 SNORD19-201ENST00000391191 68 ntBASIC-0.23□□□□□ -2.45
SLC44A3Q8N4M1 SNORA13-201ENST00000458790 133 ntBASIC-0.23□□□□□ -2.45
SLC44A3Q8N4M1 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.24□□□□□ -2.45
SLC44A3Q8N4M1 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.24□□□□□ -2.45
SLC44A3Q8N4M1 RNU6-614P-201ENST00000384369 107 ntBASIC-0.25□□□□□ -2.45
SLC44A3Q8N4M1 SNORD18.2-201ENST00000459604 70 ntBASIC-0.25□□□□□ -2.45
SLC44A3Q8N4M1 U6.59-201ENST00000615686 107 ntBASIC-0.25□□□□□ -2.45
SLC44A3Q8N4M1 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.26□□□□□ -2.45
SLC44A3Q8N4M1 MIR3179-1-201ENST00000578940 84 ntBASIC-0.26□□□□□ -2.45
SLC44A3Q8N4M1 MIR3179-2-201ENST00000579107 84 ntBASIC-0.26□□□□□ -2.45
SLC44A3Q8N4M1 MIR3179-3-201ENST00000579566 84 ntBASIC-0.26□□□□□ -2.45
SLC44A3Q8N4M1 MIR3179-4-201ENST00000617599 84 ntBASIC-0.26□□□□□ -2.45
SLC44A3Q8N4M1 SNORA26.4-201ENST00000391188 123 ntBASIC-0.27□□□□□ -2.45
SLC44A3Q8N4M1 RNU6-721P-201ENST00000410155 105 ntBASIC-0.27□□□□□ -2.45
SLC44A3Q8N4M1 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.28□□□□□ -2.45
SLC44A3Q8N4M1 MIR3170-201ENST00000582699 77 ntBASIC-0.28□□□□□ -2.45
SLC44A3Q8N4M1 MIR204-201ENST00000385200 110 ntBASIC-0.29□□□□□ -2.46
SLC44A3Q8N4M1 RNU6-995P-201ENST00000391244 107 ntBASIC-0.29□□□□□ -2.46
SLC44A3Q8N4M1 AP002795.1-201ENST00000534879 84 ntBASIC-0.29□□□□□ -2.46
SLC44A3Q8N4M1 AP000533.3-201ENST00000447704 118 ntBASIC-0.3□□□□□ -2.46
SLC44A3Q8N4M1 RNU6-980P-201ENST00000516925 103 ntBASIC-0.3□□□□□ -2.46
SLC44A3Q8N4M1 SNORD115-33-201ENST00000363723 82 ntBASIC-0.31□□□□□ -2.46
SLC44A3Q8N4M1 MIR520D-201ENST00000385002 87 ntBASIC-0.31□□□□□ -2.46
SLC44A3Q8N4M1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.31□□□□□ -2.46
SLC44A3Q8N4M1 RNU6-987P-201ENST00000384759 104 ntBASIC-0.32□□□□□ -2.46
SLC44A3Q8N4M1 MIR1468-201ENST00000410600 86 ntBASIC-0.32□□□□□ -2.46
SLC44A3Q8N4M1 RNY1P9-201ENST00000532431 109 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms