Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SNORA41B-201ENST00000384785 128 ntBASIC-0.39□□□□□ -2.47
CLIP4Q8N3C7 RNU6-284P-201ENST00000411105 106 ntBASIC-0.39□□□□□ -2.47
CLIP4Q8N3C7 RNU7-88P-201ENST00000458752 63 ntBASIC-0.39□□□□□ -2.47
CLIP4Q8N3C7 MIR4436A-201ENST00000585278 85 ntBASIC-0.39□□□□□ -2.47
CLIP4Q8N3C7 AC103706.3-201ENST00000636297 85 ntBASIC-0.39□□□□□ -2.47
CLIP4Q8N3C7 MIR101-1-201ENST00000362265 75 ntBASIC-0.4□□□□□ -2.47
CLIP4Q8N3C7 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
CLIP4Q8N3C7 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.4□□□□□ -2.47
CLIP4Q8N3C7 SNORA3B-201ENST00000391305 131 ntBASIC-0.4□□□□□ -2.47
CLIP4Q8N3C7 MIR1265-201ENST00000408444 86 ntBASIC-0.4□□□□□ -2.47
CLIP4Q8N3C7 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.4□□□□□ -2.47
CLIP4Q8N3C7 SNORA25.5-201ENST00000363782 126 ntBASIC-0.41□□□□□ -2.48
CLIP4Q8N3C7 SNORD116-16-201ENST00000384533 92 ntBASIC-0.41□□□□□ -2.48
CLIP4Q8N3C7 SNORD75.1-201ENST00000408373 60 ntBASIC-0.41□□□□□ -2.48
CLIP4Q8N3C7 U7.5-201ENST00000517224 61 ntBASIC-0.41□□□□□ -2.48
CLIP4Q8N3C7 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.42□□□□□ -2.48
CLIP4Q8N3C7 MIR604-201ENST00000384880 94 ntBASIC-0.43□□□□□ -2.48
CLIP4Q8N3C7 RNA5SP451-201ENST00000410588 110 ntBASIC-0.43□□□□□ -2.48
CLIP4Q8N3C7 AC021146.6-201ENST00000514659 117 ntBASIC-0.43□□□□□ -2.48
CLIP4Q8N3C7 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.44□□□□□ -2.48
CLIP4Q8N3C7 RNA5SP192-201ENST00000364404 120 ntBASIC-0.44□□□□□ -2.48
CLIP4Q8N3C7 RNU6-758P-201ENST00000516292 89 ntBASIC-0.44□□□□□ -2.48
CLIP4Q8N3C7 SNORD60.1-201ENST00000362451 73 ntBASIC-0.45□□□□□ -2.48
CLIP4Q8N3C7 RNA5SP368-201ENST00000364298 116 ntBASIC-0.45□□□□□ -2.48
CLIP4Q8N3C7 SNORD114-17-201ENST00000364699 75 ntBASIC-0.45□□□□□ -2.48
CLIP4Q8N3C7 RNU6-471P-201ENST00000383944 106 ntBASIC-0.45□□□□□ -2.48
CLIP4Q8N3C7 SNORA32.3-201ENST00000384772 121 ntBASIC-0.45□□□□□ -2.48
CLIP4Q8N3C7 MIR6086-201ENST00000638065 55 ntBASIC-0.45□□□□□ -2.48
CLIP4Q8N3C7 Z95118.1-201ENST00000421372 247 ntBASIC-0.46□□□□□ -2.48
CLIP4Q8N3C7 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.47□□□□□ -2.48
CLIP4Q8N3C7 RNA5SP476-201ENST00000516613 103 ntBASIC-0.47□□□□□ -2.48
CLIP4Q8N3C7 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.47□□□□□ -2.48
CLIP4Q8N3C7 MIR548AZ-201ENST00000616567 95 ntBASIC-0.47□□□□□ -2.48
CLIP4Q8N3C7 RNU6-598P-201ENST00000364017 105 ntBASIC-0.48□□□□□ -2.49
CLIP4Q8N3C7 RNU6-590P-201ENST00000365039 107 ntBASIC-0.48□□□□□ -2.49
CLIP4Q8N3C7 RNU6-696P-201ENST00000390834 107 ntBASIC-0.48□□□□□ -2.49
CLIP4Q8N3C7 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.48□□□□□ -2.49
CLIP4Q8N3C7 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.48□□□□□ -2.49
CLIP4Q8N3C7 SNORD114-14-201ENST00000362723 75 ntBASIC-0.49□□□□□ -2.49
CLIP4Q8N3C7 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.49□□□□□ -2.49
CLIP4Q8N3C7 MIR224-201ENST00000384889 81 ntBASIC-0.49□□□□□ -2.49
CLIP4Q8N3C7 RNU6-122P-201ENST00000516818 107 ntBASIC-0.49□□□□□ -2.49
CLIP4Q8N3C7 RNU6-940P-201ENST00000363433 104 ntBASIC-0.5□□□□□ -2.49
CLIP4Q8N3C7 AC110620.1-201ENST00000416042 228 ntBASIC-0.5□□□□□ -2.49
CLIP4Q8N3C7 AC139453.2-201ENST00000487255 133 ntBASIC-0.5□□□□□ -2.49
CLIP4Q8N3C7 RNU6-732P-201ENST00000516033 103 ntBASIC-0.5□□□□□ -2.49
CLIP4Q8N3C7 U2.18-201ENST00000622185 84 ntBASIC-0.5□□□□□ -2.49
CLIP4Q8N3C7 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.51□□□□□ -2.49
CLIP4Q8N3C7 SNORD63.1-201ENST00000516178 80 ntBASIC-0.51□□□□□ -2.49
CLIP4Q8N3C7 SNORD1B-201ENST00000363091 84 ntBASIC-0.52□□□□□ -2.49
CLIP4Q8N3C7 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
CLIP4Q8N3C7 SNORD19-201ENST00000391191 68 ntBASIC-0.52□□□□□ -2.49
CLIP4Q8N3C7 RNA5SP25-201ENST00000410815 110 ntBASIC-0.52□□□□□ -2.49
CLIP4Q8N3C7 RPS29P8-201ENST00000445109 171 ntBASIC-0.52□□□□□ -2.49
CLIP4Q8N3C7 AC125388.1-201ENST00000459631 156 ntBASIC-0.52□□□□□ -2.49
CLIP4Q8N3C7 AP002795.1-201ENST00000534879 84 ntBASIC-0.52□□□□□ -2.49
CLIP4Q8N3C7 SNORA26.4-201ENST00000391188 123 ntBASIC-0.53□□□□□ -2.49
CLIP4Q8N3C7 SNORD115-33-201ENST00000363723 82 ntBASIC-0.54□□□□□ -2.5
CLIP4Q8N3C7 SNORD114-25-201ENST00000363742 72 ntBASIC-0.54□□□□□ -2.5
CLIP4Q8N3C7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
CLIP4Q8N3C7 MIR466-201ENST00000580653 84 ntBASIC-0.54□□□□□ -2.5
CLIP4Q8N3C7 SNORD95.1-201ENST00000364099 68 ntBASIC-0.55□□□□□ -2.5
CLIP4Q8N3C7 RNU6-431P-201ENST00000383874 107 ntBASIC-0.55□□□□□ -2.5
CLIP4Q8N3C7 RNU6-172P-201ENST00000411000 93 ntBASIC-0.55□□□□□ -2.5
CLIP4Q8N3C7 SNORD57-201ENST00000448188 72 ntBASIC-0.55□□□□□ -2.5
CLIP4Q8N3C7 SNORD64-201ENST00000386683 67 ntBASIC-0.56□□□□□ -2.5
CLIP4Q8N3C7 MIR548Q-201ENST00000408404 100 ntBASIC-0.56□□□□□ -2.5
CLIP4Q8N3C7 RNU6-30P-201ENST00000384561 107 ntBASIC-0.57□□□□□ -2.5
CLIP4Q8N3C7 MIR548AA1-201ENST00000384971 97 ntBASIC-0.57□□□□□ -2.5
CLIP4Q8N3C7 HAR1A.1-201ENST00000459583 118 ntBASIC-0.57□□□□□ -2.5
CLIP4Q8N3C7 RNU6-669P-201ENST00000365575 107 ntBASIC-0.58□□□□□ -2.5
CLIP4Q8N3C7 MIR579-201ENST00000385221 98 ntBASIC-0.58□□□□□ -2.5
CLIP4Q8N3C7 RNU4-63P-201ENST00000411313 118 ntBASIC-0.58□□□□□ -2.5
CLIP4Q8N3C7 AL353691.2-201ENST00000443795 59 ntBASIC-0.58□□□□□ -2.5
CLIP4Q8N3C7 MIR3938-201ENST00000582157 103 ntBASIC-0.58□□□□□ -2.5
CLIP4Q8N3C7 MIR147A-201ENST00000385079 72 ntBASIC-0.59□□□□□ -2.5
CLIP4Q8N3C7 snoU13.19-201ENST00000459148 104 ntBASIC-0.59□□□□□ -2.5
CLIP4Q8N3C7 RNU6-231P-201ENST00000517122 103 ntBASIC-0.59□□□□□ -2.5
CLIP4Q8N3C7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.59□□□□□ -2.5
CLIP4Q8N3C7 MIR7110-201ENST00000612638 86 ntBASIC-0.59□□□□□ -2.5
CLIP4Q8N3C7 SNORD114-15-201ENST00000364687 72 ntBASIC-0.6□□□□□ -2.51
CLIP4Q8N3C7 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.6□□□□□ -2.51
CLIP4Q8N3C7 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.6□□□□□ -2.51
CLIP4Q8N3C7 SNORD116.2-201ENST00000391251 93 ntBASIC-0.61□□□□□ -2.51
CLIP4Q8N3C7 RNU7-151P-201ENST00000516930 53 ntBASIC-0.61□□□□□ -2.51
CLIP4Q8N3C7 MIR5683-201ENST00000636514 76 ntBASIC-0.61□□□□□ -2.51
CLIP4Q8N3C7 RNU6-995P-201ENST00000391244 107 ntBASIC-0.62□□□□□ -2.51
CLIP4Q8N3C7 RPL35AP4-201ENST00000412007 102 ntBASIC-0.62□□□□□ -2.51
CLIP4Q8N3C7 AL500527.2-201ENST00000454105 95 ntBASIC-0.62□□□□□ -2.51
CLIP4Q8N3C7 MIR520D-201ENST00000385002 87 ntBASIC-0.63□□□□□ -2.51
CLIP4Q8N3C7 MIR507-201ENST00000385234 94 ntBASIC-0.63□□□□□ -2.51
CLIP4Q8N3C7 MT-TQ-201ENST00000387372 72 ntBASIC-0.63□□□□□ -2.51
CLIP4Q8N3C7 RNU7-119P-201ENST00000459279 63 ntBASIC-0.63□□□□□ -2.51
CLIP4Q8N3C7 MIR382-201ENST00000637119 76 ntBASIC-0.64□□□□□ -2.51
CLIP4Q8N3C7 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.65□□□□□ -2.51
CLIP4Q8N3C7 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.65□□□□□ -2.51
CLIP4Q8N3C7 RNU6-810P-201ENST00000364001 107 ntBASIC-0.66□□□□□ -2.52
CLIP4Q8N3C7 RNU6-788P-201ENST00000390967 104 ntBASIC-0.66□□□□□ -2.52
CLIP4Q8N3C7 MIR4490-201ENST00000582647 84 ntBASIC-0.66□□□□□ -2.52
CLIP4Q8N3C7 MIR3170-201ENST00000582699 77 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms