Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.88□□□□□ -2.55
VPS52Q8N1B4 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.88□□□□□ -2.55
VPS52Q8N1B4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
VPS52Q8N1B4 RNA5SP225-201ENST00000410874 135 ntBASIC-0.89□□□□□ -2.55
VPS52Q8N1B4 SNORD114-17-201ENST00000364699 75 ntBASIC-0.9□□□□□ -2.55
VPS52Q8N1B4 MIR630-201ENST00000384957 97 ntBASIC-0.9□□□□□ -2.55
VPS52Q8N1B4 SNORD113-2-201ENST00000391082 72 ntBASIC-0.9□□□□□ -2.55
VPS52Q8N1B4 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.9□□□□□ -2.55
VPS52Q8N1B4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.91□□□□□ -2.56
VPS52Q8N1B4 RNA5SP331-201ENST00000364986 107 ntBASIC-0.91□□□□□ -2.56
VPS52Q8N1B4 RNU6-458P-201ENST00000384179 107 ntBASIC-0.91□□□□□ -2.56
VPS52Q8N1B4 AL500527.2-201ENST00000454105 95 ntBASIC-0.91□□□□□ -2.56
VPS52Q8N1B4 U6.58-201ENST00000613107 107 ntBASIC-0.91□□□□□ -2.56
VPS52Q8N1B4 SNORD114-25-201ENST00000363742 72 ntBASIC-0.92□□□□□ -2.56
VPS52Q8N1B4 MIR527-201ENST00000385244 85 ntBASIC-0.92□□□□□ -2.56
VPS52Q8N1B4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.92□□□□□ -2.56
VPS52Q8N1B4 MIR429-201ENST00000362106 83 ntBASIC-0.93□□□□□ -2.56
VPS52Q8N1B4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.93□□□□□ -2.56
VPS52Q8N1B4 RNU6-540P-201ENST00000384622 101 ntBASIC-0.93□□□□□ -2.56
VPS52Q8N1B4 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.93□□□□□ -2.56
VPS52Q8N1B4 MIR147A-201ENST00000385079 72 ntBASIC-0.93□□□□□ -2.56
VPS52Q8N1B4 U7.5-201ENST00000517224 61 ntBASIC-0.93□□□□□ -2.56
VPS52Q8N1B4 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.94□□□□□ -2.56
VPS52Q8N1B4 SNORD83B-201ENST00000386745 93 ntBASIC-0.94□□□□□ -2.56
VPS52Q8N1B4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.95□□□□□ -2.56
VPS52Q8N1B4 RNU6-871P-201ENST00000516122 100 ntBASIC-0.96□□□□□ -2.56
VPS52Q8N1B4 RNU6-542P-201ENST00000516405 103 ntBASIC-0.96□□□□□ -2.56
VPS52Q8N1B4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.96□□□□□ -2.56
VPS52Q8N1B4 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.97□□□□□ -2.56
VPS52Q8N1B4 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.97□□□□□ -2.56
VPS52Q8N1B4 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.98□□□□□ -2.57
VPS52Q8N1B4 SNORD116-16-201ENST00000384533 92 ntBASIC-0.98□□□□□ -2.57
VPS52Q8N1B4 RNU6-663P-201ENST00000391105 106 ntBASIC-0.98□□□□□ -2.57
VPS52Q8N1B4 RNA5SP266-201ENST00000410273 108 ntBASIC-0.98□□□□□ -2.57
VPS52Q8N1B4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.98□□□□□ -2.57
VPS52Q8N1B4 SNORA72.7-201ENST00000516349 94 ntBASIC-0.98□□□□□ -2.57
VPS52Q8N1B4 RNU6-431P-201ENST00000383874 107 ntBASIC-0.99□□□□□ -2.57
VPS52Q8N1B4 SCARNA17-201ENST00000516183 144 ntBASIC-0.99□□□□□ -2.57
VPS52Q8N1B4 RNU6-696P-201ENST00000390834 107 ntBASIC-1□□□□□ -2.57
VPS52Q8N1B4 RNU6-1275P-201ENST00000391087 107 ntBASIC-1□□□□□ -2.57
VPS52Q8N1B4 SNORD63.1-201ENST00000516178 80 ntBASIC-1□□□□□ -2.57
VPS52Q8N1B4 RNY1P9-201ENST00000532431 109 ntBASIC-1□□□□□ -2.57
VPS52Q8N1B4 MIR4499-201ENST00000584834 69 ntBASIC-1□□□□□ -2.57
VPS52Q8N1B4 MIR889-201ENST00000401280 79 ntBASIC-1.01□□□□□ -2.57
VPS52Q8N1B4 SNORD57-201ENST00000448188 72 ntBASIC-1.01□□□□□ -2.57
VPS52Q8N1B4 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.01□□□□□ -2.57
VPS52Q8N1B4 MIR4662A-201ENST00000637499 67 ntBASIC-1.01□□□□□ -2.57
VPS52Q8N1B4 SNORA41B-201ENST00000384785 128 ntBASIC-1.02□□□□□ -2.57
VPS52Q8N1B4 SNORD64-201ENST00000386683 67 ntBASIC-1.02□□□□□ -2.57
VPS52Q8N1B4 AL353691.2-201ENST00000443795 59 ntBASIC-1.02□□□□□ -2.57
VPS52Q8N1B4 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.02□□□□□ -2.57
VPS52Q8N1B4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.02□□□□□ -2.57
VPS52Q8N1B4 uc_338.19-201ENST00000616808 99 ntBASIC-1.02□□□□□ -2.57
VPS52Q8N1B4 RNU6-776P-201ENST00000364403 104 ntBASIC-1.03□□□□□ -2.57
VPS52Q8N1B4 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.03□□□□□ -2.57
VPS52Q8N1B4 SNORD19-201ENST00000391191 68 ntBASIC-1.04□□□□□ -2.58
VPS52Q8N1B4 RNU6-630P-201ENST00000391258 106 ntBASIC-1.04□□□□□ -2.58
VPS52Q8N1B4 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.04□□□□□ -2.58
VPS52Q8N1B4 SNORA25.4-201ENST00000363666 124 ntBASIC-1.05□□□□□ -2.58
VPS52Q8N1B4 SNORD30.1-201ENST00000391309 70 ntBASIC-1.05□□□□□ -2.58
VPS52Q8N1B4 RNU6-598P-201ENST00000364017 105 ntBASIC-1.06□□□□□ -2.58
VPS52Q8N1B4 RNU6-92P-201ENST00000605893 104 ntBASIC-1.06□□□□□ -2.58
VPS52Q8N1B4 MIR378F-201ENST00000578143 78 ntBASIC-1.07□□□□□ -2.58
VPS52Q8N1B4 MIR382-201ENST00000637119 76 ntBASIC-1.07□□□□□ -2.58
VPS52Q8N1B4 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.08□□□□□ -2.58
VPS52Q8N1B4 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
VPS52Q8N1B4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
VPS52Q8N1B4 RNU6-539P-201ENST00000516665 103 ntBASIC-1.08□□□□□ -2.58
VPS52Q8N1B4 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.09□□□□□ -2.58
VPS52Q8N1B4 RNU6-649P-201ENST00000384463 107 ntBASIC-1.09□□□□□ -2.58
VPS52Q8N1B4 Y_RNA.565-201ENST00000384719 101 ntBASIC-1.09□□□□□ -2.58
VPS52Q8N1B4 MIR587-201ENST00000384845 96 ntBASIC-1.1□□□□□ -2.59
VPS52Q8N1B4 U6.111-201ENST00000636093 83 ntBASIC-1.1□□□□□ -2.59
VPS52Q8N1B4 AP002795.1-201ENST00000534879 84 ntBASIC-1.11□□□□□ -2.59
VPS52Q8N1B4 AC005520.4-201ENST00000604337 90 ntBASIC-1.11□□□□□ -2.59
VPS52Q8N1B4 MIR5683-201ENST00000636514 76 ntBASIC-1.11□□□□□ -2.59
VPS52Q8N1B4 SNORD1B-201ENST00000363091 84 ntBASIC-1.13□□□□□ -2.59
VPS52Q8N1B4 MIR29B1-201ENST00000385015 81 ntBASIC-1.13□□□□□ -2.59
VPS52Q8N1B4 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.13□□□□□ -2.59
VPS52Q8N1B4 MIR4324-201ENST00000584846 72 ntBASIC-1.13□□□□□ -2.59
VPS52Q8N1B4 U2.18-201ENST00000622185 84 ntBASIC-1.13□□□□□ -2.59
VPS52Q8N1B4 snoU83B.1-201ENST00000517136 88 ntBASIC-1.14□□□□□ -2.59
VPS52Q8N1B4 MIR6738-201ENST00000619620 64 ntBASIC-1.15□□□□□ -2.59
VPS52Q8N1B4 SNORD60.1-201ENST00000362451 73 ntBASIC-1.16□□□□□ -2.6
VPS52Q8N1B4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.16□□□□□ -2.6
VPS52Q8N1B4 MIR4490-201ENST00000582647 84 ntBASIC-1.16□□□□□ -2.6
VPS52Q8N1B4 MIR4511-201ENST00000582784 87 ntBASIC-1.16□□□□□ -2.6
VPS52Q8N1B4 MIR548Q-201ENST00000408404 100 ntBASIC-1.17□□□□□ -2.6
VPS52Q8N1B4 AC103706.3-201ENST00000636297 85 ntBASIC-1.17□□□□□ -2.6
VPS52Q8N1B4 SNORA25.5-201ENST00000363782 126 ntBASIC-1.18□□□□□ -2.6
VPS52Q8N1B4 SNX3P1X-201ENST00000414887 175 ntBASIC-1.18□□□□□ -2.6
VPS52Q8N1B4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.18□□□□□ -2.6
VPS52Q8N1B4 RNU6-10P-201ENST00000384036 107 ntBASIC-1.19□□□□□ -2.6
VPS52Q8N1B4 RNU6-800P-201ENST00000384473 103 ntBASIC-1.2□□□□□ -2.6
VPS52Q8N1B4 MIR4306-201ENST00000583390 91 ntBASIC-1.2□□□□□ -2.6
VPS52Q8N1B4 RNA5SP26-201ENST00000362406 119 ntBASIC-1.21□□□□□ -2.6
VPS52Q8N1B4 RNU6-122P-201ENST00000516818 107 ntBASIC-1.21□□□□□ -2.6
VPS52Q8N1B4 MIR6818-201ENST00000621576 65 ntBASIC-1.21□□□□□ -2.6
VPS52Q8N1B4 MIR507-201ENST00000385234 94 ntBASIC-1.22□□□□□ -2.6
VPS52Q8N1B4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms