Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-630P-201ENST00000391258 106 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 MIR8485-201ENST00000401372 91 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 MIR1255A-201ENST00000408338 113 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 Z95118.1-201ENST00000421372 247 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 AL353691.2-201ENST00000443795 59 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 RNU6-634P-201ENST00000459134 106 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 RNU6-70P-201ENST00000516438 60 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 RNY1P9-201ENST00000532431 109 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 MIR378F-201ENST00000578143 78 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 MIR3170-201ENST00000582699 77 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 MIR5683-201ENST00000636514 76 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 MIR4679-1-201ENST00000637619 75 ntBASIC-0.4□□□□□ -2.47
CKAP4Q07065 RNU6-79P-201ENST00000362511 107 ntBASIC-0.41□□□□□ -2.48
CKAP4Q07065 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.41□□□□□ -2.48
CKAP4Q07065 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.41□□□□□ -2.48
CKAP4Q07065 RNU6-857P-201ENST00000515893 110 ntBASIC-0.41□□□□□ -2.48
CKAP4Q07065 MIR4306-201ENST00000583390 91 ntBASIC-0.41□□□□□ -2.48
CKAP4Q07065 AC091912.2-201ENST00000624798 167 ntBASIC-0.41□□□□□ -2.48
CKAP4Q07065 SNORD60.1-201ENST00000362451 73 ntBASIC-0.42□□□□□ -2.48
CKAP4Q07065 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.42□□□□□ -2.48
CKAP4Q07065 RNU6-668P-201ENST00000364180 107 ntBASIC-0.42□□□□□ -2.48
CKAP4Q07065 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.42□□□□□ -2.48
CKAP4Q07065 MIR889-201ENST00000401280 79 ntBASIC-0.42□□□□□ -2.48
CKAP4Q07065 RNA5SP225-201ENST00000410874 135 ntBASIC-0.42□□□□□ -2.48
CKAP4Q07065 AC005520.4-201ENST00000604337 90 ntBASIC-0.42□□□□□ -2.48
CKAP4Q07065 uc_338.19-201ENST00000616808 99 ntBASIC-0.42□□□□□ -2.48
CKAP4Q07065 RNU6-164P-201ENST00000364604 103 ntBASIC-0.43□□□□□ -2.48
CKAP4Q07065 RNU6-411P-201ENST00000384451 107 ntBASIC-0.43□□□□□ -2.48
CKAP4Q07065 MIR527-201ENST00000385244 85 ntBASIC-0.43□□□□□ -2.48
CKAP4Q07065 SNORD83B-201ENST00000386745 93 ntBASIC-0.43□□□□□ -2.48
CKAP4Q07065 RPL35AP4-201ENST00000412007 102 ntBASIC-0.43□□□□□ -2.48
CKAP4Q07065 MTND4LP1-201ENST00000446263 157 ntBASIC-0.43□□□□□ -2.48
CKAP4Q07065 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.43□□□□□ -2.48
CKAP4Q07065 MIR6874-201ENST00000635894 71 ntBASIC-0.43□□□□□ -2.48
CKAP4Q07065 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 RNU6-563P-201ENST00000364872 108 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 MIR548C-201ENST00000384815 97 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 SNORD78.1-201ENST00000390866 65 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 SNORA26.2-201ENST00000390922 122 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 RNU7-151P-201ENST00000516930 53 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 MIR5589-201ENST00000579442 60 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 U7.4-201ENST00000614961 63 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 MIR3202-2-201ENST00000635980 79 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 MIR6759-201ENST00000638110 65 ntBASIC-0.44□□□□□ -2.48
CKAP4Q07065 MIR101-1-201ENST00000362265 75 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 MIR604-201ENST00000384880 94 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 MIR548AA1-201ENST00000384971 97 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 MIR507-201ENST00000385234 94 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 MIR154-201ENST00000385243 84 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 MIR1302-4-201ENST00000408701 150 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 RNU6-542P-201ENST00000516405 103 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 SNORA40.16-201ENST00000517238 121 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 MIR4490-201ENST00000582647 84 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 MIR4324-201ENST00000584846 72 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 RNU6-92P-201ENST00000605893 104 ntBASIC-0.45□□□□□ -2.48
CKAP4Q07065 RNU6-669P-201ENST00000365575 107 ntBASIC-0.46□□□□□ -2.48
CKAP4Q07065 RNU6-24P-201ENST00000384440 107 ntBASIC-0.46□□□□□ -2.48
CKAP4Q07065 MIR581-201ENST00000384895 96 ntBASIC-0.46□□□□□ -2.48
CKAP4Q07065 RNU6-172P-201ENST00000411000 93 ntBASIC-0.46□□□□□ -2.48
CKAP4Q07065 RNA5SP480-201ENST00000516840 109 ntBASIC-0.46□□□□□ -2.48
CKAP4Q07065 snoU83B.1-201ENST00000517136 88 ntBASIC-0.46□□□□□ -2.48
CKAP4Q07065 MIR3115-201ENST00000577915 68 ntBASIC-0.46□□□□□ -2.48
CKAP4Q07065 AC013734.1-201ENST00000619329 111 ntBASIC-0.46□□□□□ -2.48
CKAP4Q07065 RNA5SP368-201ENST00000364298 116 ntBASIC-0.47□□□□□ -2.48
CKAP4Q07065 RNA5SP192-201ENST00000364404 120 ntBASIC-0.47□□□□□ -2.48
CKAP4Q07065 RNU6-663P-201ENST00000391105 106 ntBASIC-0.47□□□□□ -2.48
CKAP4Q07065 RNU6-122P-201ENST00000516818 107 ntBASIC-0.47□□□□□ -2.48
CKAP4Q07065 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.47□□□□□ -2.48
CKAP4Q07065 MIR4511-201ENST00000582784 87 ntBASIC-0.47□□□□□ -2.48
CKAP4Q07065 MIR4493-201ENST00000584016 73 ntBASIC-0.47□□□□□ -2.48
CKAP4Q07065 MIR2909-201ENST00000617113 69 ntBASIC-0.47□□□□□ -2.48
CKAP4Q07065 RNU6-446P-201ENST00000362827 106 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 MIR579-201ENST00000385221 98 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 MT-TQ-201ENST00000387372 72 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 RNA5SP86-201ENST00000390869 98 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 AC110620.1-201ENST00000416042 228 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 RNU6-758P-201ENST00000516292 89 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 RNU6-68P-201ENST00000516576 104 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 RNU6-231P-201ENST00000517122 103 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 U6.111-201ENST00000636093 83 ntBASIC-0.48□□□□□ -2.49
CKAP4Q07065 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.49□□□□□ -2.49
CKAP4Q07065 SNORA25.4-201ENST00000363666 124 ntBASIC-0.49□□□□□ -2.49
CKAP4Q07065 SNORA25.5-201ENST00000363782 126 ntBASIC-0.49□□□□□ -2.49
CKAP4Q07065 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.49□□□□□ -2.49
CKAP4Q07065 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.49□□□□□ -2.49
CKAP4Q07065 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
CKAP4Q07065 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.49□□□□□ -2.49
CKAP4Q07065 RNU6-810P-201ENST00000364001 107 ntBASIC-0.5□□□□□ -2.49
CKAP4Q07065 RNU6-895P-201ENST00000384125 103 ntBASIC-0.5□□□□□ -2.49
CKAP4Q07065 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.5□□□□□ -2.49
CKAP4Q07065 MIR548Q-201ENST00000408404 100 ntBASIC-0.5□□□□□ -2.49
CKAP4Q07065 RNY3P8-201ENST00000411366 126 ntBASIC-0.5□□□□□ -2.49
CKAP4Q07065 RNU7-160P-201ENST00000516660 62 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms