Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-458P-201ENST00000384179 107 ntBASIC-1.06□□□□□ -2.58
CX3CL1P78423 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.06□□□□□ -2.58
CX3CL1P78423 MIR3165-201ENST00000579874 75 ntBASIC-1.06□□□□□ -2.58
CX3CL1P78423 U6.58-201ENST00000613107 107 ntBASIC-1.06□□□□□ -2.58
CX3CL1P78423 SNORD63.1-201ENST00000516178 80 ntBASIC-1.07□□□□□ -2.58
CX3CL1P78423 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.08□□□□□ -2.58
CX3CL1P78423 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.08□□□□□ -2.58
CX3CL1P78423 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.08□□□□□ -2.58
CX3CL1P78423 RNU6-895P-201ENST00000384125 103 ntBASIC-1.08□□□□□ -2.58
CX3CL1P78423 MIR527-201ENST00000385244 85 ntBASIC-1.08□□□□□ -2.58
CX3CL1P78423 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.09□□□□□ -2.58
CX3CL1P78423 MIR630-201ENST00000384957 97 ntBASIC-1.09□□□□□ -2.58
CX3CL1P78423 MIR3202-2-201ENST00000635980 79 ntBASIC-1.09□□□□□ -2.58
CX3CL1P78423 MIR382-201ENST00000637119 76 ntBASIC-1.09□□□□□ -2.58
CX3CL1P78423 MIR429-201ENST00000362106 83 ntBASIC-1.1□□□□□ -2.59
CX3CL1P78423 RNY4P29-201ENST00000410801 97 ntBASIC-1.1□□□□□ -2.59
CX3CL1P78423 AL353691.2-201ENST00000443795 59 ntBASIC-1.1□□□□□ -2.59
CX3CL1P78423 RNA5SP476-201ENST00000516613 103 ntBASIC-1.1□□□□□ -2.59
CX3CL1P78423 MIR4320-201ENST00000636981 65 ntBASIC-1.1□□□□□ -2.59
CX3CL1P78423 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.11□□□□□ -2.59
CX3CL1P78423 SNORD115-31-201ENST00000365318 82 ntBASIC-1.11□□□□□ -2.59
CX3CL1P78423 SNORD116-24-201ENST00000384549 92 ntBASIC-1.11□□□□□ -2.59
CX3CL1P78423 SNORA26.2-201ENST00000390922 122 ntBASIC-1.11□□□□□ -2.59
CX3CL1P78423 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.11□□□□□ -2.59
CX3CL1P78423 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.12□□□□□ -2.59
CX3CL1P78423 SNORD113-2-201ENST00000391082 72 ntBASIC-1.12□□□□□ -2.59
CX3CL1P78423 RNU6-687P-201ENST00000516443 89 ntBASIC-1.12□□□□□ -2.59
CX3CL1P78423 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.13□□□□□ -2.59
CX3CL1P78423 RNA5SP173-201ENST00000364857 136 ntBASIC-1.13□□□□□ -2.59
CX3CL1P78423 snoU83B.1-201ENST00000517136 88 ntBASIC-1.13□□□□□ -2.59
CX3CL1P78423 MIR4306-201ENST00000583390 91 ntBASIC-1.13□□□□□ -2.59
CX3CL1P78423 MIR409-201ENST00000362237 79 ntBASIC-1.14□□□□□ -2.59
CX3CL1P78423 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.14□□□□□ -2.59
CX3CL1P78423 RNU6-411P-201ENST00000384451 107 ntBASIC-1.14□□□□□ -2.59
CX3CL1P78423 RNA5SP461-201ENST00000516451 104 ntBASIC-1.14□□□□□ -2.59
CX3CL1P78423 U7.4-201ENST00000614961 63 ntBASIC-1.14□□□□□ -2.59
CX3CL1P78423 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.15□□□□□ -2.59
CX3CL1P78423 RNU6-573P-201ENST00000383938 106 ntBASIC-1.15□□□□□ -2.59
CX3CL1P78423 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.16□□□□□ -2.6
CX3CL1P78423 RNU6-696P-201ENST00000390834 107 ntBASIC-1.16□□□□□ -2.6
CX3CL1P78423 SNORD19-201ENST00000391191 68 ntBASIC-1.16□□□□□ -2.6
CX3CL1P78423 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.17□□□□□ -2.6
CX3CL1P78423 RNA5SP266-201ENST00000410273 108 ntBASIC-1.17□□□□□ -2.6
CX3CL1P78423 HAR1A.1-201ENST00000459583 118 ntBASIC-1.17□□□□□ -2.6
CX3CL1P78423 RNU6-228P-201ENST00000362700 106 ntBASIC-1.18□□□□□ -2.6
CX3CL1P78423 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.18□□□□□ -2.6
CX3CL1P78423 AP002795.1-201ENST00000534879 84 ntBASIC-1.18□□□□□ -2.6
CX3CL1P78423 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.19□□□□□ -2.6
CX3CL1P78423 SNORD116-16-201ENST00000384533 92 ntBASIC-1.19□□□□□ -2.6
CX3CL1P78423 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.19□□□□□ -2.6
CX3CL1P78423 MIR5683-201ENST00000636514 76 ntBASIC-1.19□□□□□ -2.6
CX3CL1P78423 RNU6-706P-201ENST00000517229 104 ntBASIC-1.2□□□□□ -2.6
CX3CL1P78423 RNU6-598P-201ENST00000364017 105 ntBASIC-1.21□□□□□ -2.6
CX3CL1P78423 MIR1255A-201ENST00000408338 113 ntBASIC-1.21□□□□□ -2.6
CX3CL1P78423 MIR548Q-201ENST00000408404 100 ntBASIC-1.21□□□□□ -2.6
CX3CL1P78423 RNU6-857P-201ENST00000515893 110 ntBASIC-1.21□□□□□ -2.6
CX3CL1P78423 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.21□□□□□ -2.6
CX3CL1P78423 MIR507-201ENST00000385234 94 ntBASIC-1.22□□□□□ -2.6
CX3CL1P78423 MIR4490-201ENST00000582647 84 ntBASIC-1.22□□□□□ -2.6
CX3CL1P78423 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.23□□□□□ -2.61
CX3CL1P78423 SNORA41B-201ENST00000384785 128 ntBASIC-1.23□□□□□ -2.61
CX3CL1P78423 MIR29B1-201ENST00000385015 81 ntBASIC-1.23□□□□□ -2.61
CX3CL1P78423 RNU6-279P-201ENST00000391297 101 ntBASIC-1.23□□□□□ -2.61
CX3CL1P78423 MIR1302-4-201ENST00000408701 150 ntBASIC-1.23□□□□□ -2.61
CX3CL1P78423 RNU6-634P-201ENST00000459134 106 ntBASIC-1.23□□□□□ -2.61
CX3CL1P78423 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.24□□□□□ -2.61
CX3CL1P78423 U2.18-201ENST00000622185 84 ntBASIC-1.24□□□□□ -2.61
CX3CL1P78423 RNU6-542P-201ENST00000516405 103 ntBASIC-1.25□□□□□ -2.61
CX3CL1P78423 MIR6818-201ENST00000621576 65 ntBASIC-1.25□□□□□ -2.61
CX3CL1P78423 SNX3P1X-201ENST00000414887 175 ntBASIC-1.26□□□□□ -2.61
CX3CL1P78423 SNORD78.1-201ENST00000390866 65 ntBASIC-1.27□□□□□ -2.61
CX3CL1P78423 RNA5SP26-201ENST00000362406 119 ntBASIC-1.28□□□□□ -2.61
CX3CL1P78423 RNU6-540P-201ENST00000384622 101 ntBASIC-1.28□□□□□ -2.61
CX3CL1P78423 HLA-S-202ENST00000425174 53 ntBASIC-1.28□□□□□ -2.61
CX3CL1P78423 SNORD1B-201ENST00000363091 84 ntBASIC-1.29□□□□□ -2.62
CX3CL1P78423 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.29□□□□□ -2.62
CX3CL1P78423 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.29□□□□□ -2.62
CX3CL1P78423 RNU6-663P-201ENST00000391105 106 ntBASIC-1.29□□□□□ -2.62
CX3CL1P78423 RNA5SP180-201ENST00000516181 101 ntBASIC-1.29□□□□□ -2.62
CX3CL1P78423 RNU6-523P-201ENST00000516304 54 ntBASIC-1.29□□□□□ -2.62
CX3CL1P78423 MIR4679-1-201ENST00000637619 75 ntBASIC-1.29□□□□□ -2.62
CX3CL1P78423 RNA5SP225-201ENST00000410874 135 ntBASIC-1.3□□□□□ -2.62
CX3CL1P78423 RNU6-630P-201ENST00000391258 106 ntBASIC-1.31□□□□□ -2.62
CX3CL1P78423 RNU6-226P-201ENST00000363778 107 ntBASIC-1.32□□□□□ -2.62
CX3CL1P78423 MIR601-201ENST00000385256 79 ntBASIC-1.32□□□□□ -2.62
CX3CL1P78423 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CX3CL1P78423 MIR1285-2-201ENST00000408311 88 ntBASIC-1.32□□□□□ -2.62
CX3CL1P78423 RPL35AP4-201ENST00000412007 102 ntBASIC-1.32□□□□□ -2.62
CX3CL1P78423 AC138207.3-201ENST00000585289 166 ntBASIC-1.32□□□□□ -2.62
CX3CL1P78423 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.32□□□□□ -2.62
CX3CL1P78423 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.33□□□□□ -2.62
CX3CL1P78423 MIR548AA1-201ENST00000384971 97 ntBASIC-1.33□□□□□ -2.62
CX3CL1P78423 MIR889-201ENST00000401280 79 ntBASIC-1.33□□□□□ -2.62
CX3CL1P78423 RNU6-92P-201ENST00000605893 104 ntBASIC-1.33□□□□□ -2.62
CX3CL1P78423 RNU7-134P-201ENST00000458997 64 ntBASIC-1.34□□□□□ -2.62
CX3CL1P78423 RNU6-871P-201ENST00000516122 100 ntBASIC-1.34□□□□□ -2.62
CX3CL1P78423 MIR1246-201ENST00000636535 73 ntBASIC-1.34□□□□□ -2.62
CX3CL1P78423 RNU6-576P-201ENST00000390854 102 ntBASIC-1.35□□□□□ -2.63
CX3CL1P78423 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.35□□□□□ -2.63
CX3CL1P78423 MIR198-201ENST00000637333 62 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 366.2 ms