Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.4□□□□□ -2.63
LIMK1P53667 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.4□□□□□ -2.63
LIMK1P53667 RNU7-88P-201ENST00000458752 63 ntBASIC-1.4□□□□□ -2.63
LIMK1P53667 RNU6-732P-201ENST00000516033 103 ntBASIC-1.4□□□□□ -2.63
LIMK1P53667 U7.5-201ENST00000517224 61 ntBASIC-1.4□□□□□ -2.63
LIMK1P53667 MIR6874-201ENST00000635894 71 ntBASIC-1.4□□□□□ -2.63
LIMK1P53667 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.41□□□□□ -2.64
LIMK1P53667 U2.22-201ENST00000636441 106 ntBASIC-1.41□□□□□ -2.64
LIMK1P53667 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.42□□□□□ -2.64
LIMK1P53667 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
LIMK1P53667 RNA5SP89-201ENST00000410300 108 ntBASIC-1.42□□□□□ -2.64
LIMK1P53667 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.42□□□□□ -2.64
LIMK1P53667 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.43□□□□□ -2.64
LIMK1P53667 RNY4P30-201ENST00000410216 95 ntBASIC-1.43□□□□□ -2.64
LIMK1P53667 RNU6-983P-201ENST00000516004 103 ntBASIC-1.43□□□□□ -2.64
LIMK1P53667 RNU6-982P-201ENST00000516216 102 ntBASIC-1.43□□□□□ -2.64
LIMK1P53667 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.43□□□□□ -2.64
LIMK1P53667 AP002795.1-201ENST00000534879 84 ntBASIC-1.43□□□□□ -2.64
LIMK1P53667 SNORD19-201ENST00000391191 68 ntBASIC-1.44□□□□□ -2.64
LIMK1P53667 SNORD18.1-201ENST00000363807 70 ntBASIC-1.45□□□□□ -2.64
LIMK1P53667 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.45□□□□□ -2.64
LIMK1P53667 MTND4LP1-201ENST00000446263 157 ntBASIC-1.45□□□□□ -2.64
LIMK1P53667 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.46□□□□□ -2.64
LIMK1P53667 RNU6-49P-201ENST00000384256 107 ntBASIC-1.46□□□□□ -2.64
LIMK1P53667 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.46□□□□□ -2.64
LIMK1P53667 MIR507-201ENST00000385234 94 ntBASIC-1.46□□□□□ -2.64
LIMK1P53667 MIR548H1-201ENST00000408610 102 ntBASIC-1.46□□□□□ -2.64
LIMK1P53667 MIR4490-201ENST00000582647 84 ntBASIC-1.46□□□□□ -2.64
LIMK1P53667 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.47□□□□□ -2.64
LIMK1P53667 RNU7-174P-201ENST00000516248 59 ntBASIC-1.47□□□□□ -2.64
LIMK1P53667 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.47□□□□□ -2.64
LIMK1P53667 MIR5683-201ENST00000636514 76 ntBASIC-1.48□□□□□ -2.65
LIMK1P53667 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.49□□□□□ -2.65
LIMK1P53667 MIR5588-201ENST00000581890 63 ntBASIC-1.49□□□□□ -2.65
LIMK1P53667 MIR8053-201ENST00000613344 75 ntBASIC-1.49□□□□□ -2.65
LIMK1P53667 RNU6-79P-201ENST00000362511 107 ntBASIC-1.5□□□□□ -2.65
LIMK1P53667 AC090616.4-201ENST00000448026 115 ntBASIC-1.5□□□□□ -2.65
LIMK1P53667 MIR429-201ENST00000362106 83 ntBASIC-1.51□□□□□ -2.65
LIMK1P53667 RNU6-315P-201ENST00000362666 107 ntBASIC-1.51□□□□□ -2.65
LIMK1P53667 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.51□□□□□ -2.65
LIMK1P53667 RNU6-458P-201ENST00000384179 107 ntBASIC-1.51□□□□□ -2.65
LIMK1P53667 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.51□□□□□ -2.65
LIMK1P53667 RNU6-400P-201ENST00000391173 106 ntBASIC-1.51□□□□□ -2.65
LIMK1P53667 MIR548V-201ENST00000584165 80 ntBASIC-1.51□□□□□ -2.65
LIMK1P53667 U6.58-201ENST00000613107 107 ntBASIC-1.51□□□□□ -2.65
LIMK1P53667 RNU6-668P-201ENST00000364180 107 ntBASIC-1.52□□□□□ -2.65
LIMK1P53667 MIR548Q-201ENST00000408404 100 ntBASIC-1.52□□□□□ -2.65
LIMK1P53667 RNU6-228P-201ENST00000362700 106 ntBASIC-1.53□□□□□ -2.65
LIMK1P53667 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.53□□□□□ -2.65
LIMK1P53667 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.54□□□□□ -2.66
LIMK1P53667 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.54□□□□□ -2.66
LIMK1P53667 MIR487B-201ENST00000385021 84 ntBASIC-1.54□□□□□ -2.66
LIMK1P53667 RNU6-587P-201ENST00000391282 106 ntBASIC-1.54□□□□□ -2.66
LIMK1P53667 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.55□□□□□ -2.66
LIMK1P53667 RNU6-979P-201ENST00000383896 107 ntBASIC-1.55□□□□□ -2.66
LIMK1P53667 RPL35AP4-201ENST00000412007 102 ntBASIC-1.55□□□□□ -2.66
LIMK1P53667 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.55□□□□□ -2.66
LIMK1P53667 RNU6-698P-201ENST00000363523 107 ntBASIC-1.56□□□□□ -2.66
LIMK1P53667 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.56□□□□□ -2.66
LIMK1P53667 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.56□□□□□ -2.66
LIMK1P53667 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.56□□□□□ -2.66
LIMK1P53667 RNU6-34P-201ENST00000364874 107 ntBASIC-1.56□□□□□ -2.66
LIMK1P53667 SNORD113.1-201ENST00000363280 73 ntBASIC-1.57□□□□□ -2.66
LIMK1P53667 RNU6-242P-201ENST00000384359 107 ntBASIC-1.57□□□□□ -2.66
LIMK1P53667 U4.4-201ENST00000620626 117 ntBASIC-1.57□□□□□ -2.66
LIMK1P53667 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.58□□□□□ -2.66
LIMK1P53667 AC108019.1-201ENST00000512540 175 ntBASIC-1.58□□□□□ -2.66
LIMK1P53667 MIR664A-201ENST00000626086 82 ntBASIC-1.58□□□□□ -2.66
LIMK1P53667 MIR494-201ENST00000349529 81 ntBASIC-1.59□□□□□ -2.66
LIMK1P53667 SNORD45A-201ENST00000384512 84 ntBASIC-1.59□□□□□ -2.66
LIMK1P53667 RNU6-696P-201ENST00000390834 107 ntBASIC-1.59□□□□□ -2.66
LIMK1P53667 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.59□□□□□ -2.66
LIMK1P53667 RNA5SP215-201ENST00000363440 122 ntBASIC-1.6□□□□□ -2.67
LIMK1P53667 RNU6-153P-201ENST00000364422 104 ntBASIC-1.6□□□□□ -2.67
LIMK1P53667 MIR630-201ENST00000384957 97 ntBASIC-1.6□□□□□ -2.67
LIMK1P53667 RNU7-171P-201ENST00000459581 62 ntBASIC-1.6□□□□□ -2.67
LIMK1P53667 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.6□□□□□ -2.67
LIMK1P53667 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.61□□□□□ -2.67
LIMK1P53667 MIR664B-201ENST00000626756 61 ntBASIC-1.61□□□□□ -2.67
LIMK1P53667 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.62□□□□□ -2.67
LIMK1P53667 MIR450A2-201ENST00000385022 100 ntBASIC-1.62□□□□□ -2.67
LIMK1P53667 SNORD113-2-201ENST00000391082 72 ntBASIC-1.62□□□□□ -2.67
LIMK1P53667 MIR4756-201ENST00000577874 78 ntBASIC-1.62□□□□□ -2.67
LIMK1P53667 MIR1245B-201ENST00000636115 69 ntBASIC-1.62□□□□□ -2.67
LIMK1P53667 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.63□□□□□ -2.67
LIMK1P53667 RNU6-598P-201ENST00000364017 105 ntBASIC-1.63□□□□□ -2.67
LIMK1P53667 RNU6-294P-201ENST00000364999 102 ntBASIC-1.63□□□□□ -2.67
LIMK1P53667 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.63□□□□□ -2.67
LIMK1P53667 AC018880.2-201ENST00000414265 201 ntBASIC-1.63□□□□□ -2.67
LIMK1P53667 RNU6-70P-201ENST00000516438 60 ntBASIC-1.63□□□□□ -2.67
LIMK1P53667 RNU6-608P-201ENST00000383927 104 ntBASIC-1.64□□□□□ -2.67
LIMK1P53667 RNU6-895P-201ENST00000384125 103 ntBASIC-1.64□□□□□ -2.67
LIMK1P53667 MIR154-201ENST00000385243 84 ntBASIC-1.64□□□□□ -2.67
LIMK1P53667 RNA5SP173-201ENST00000364857 136 ntBASIC-1.65□□□□□ -2.67
LIMK1P53667 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.65□□□□□ -2.67
LIMK1P53667 RNU6-118P-201ENST00000516552 102 ntBASIC-1.65□□□□□ -2.67
LIMK1P53667 RNY4P7-201ENST00000364600 96 ntBASIC-1.66□□□□□ -2.68
LIMK1P53667 RNU6-695P-201ENST00000391157 104 ntBASIC-1.66□□□□□ -2.68
LIMK1P53667 RNU6-630P-201ENST00000391258 106 ntBASIC-1.66□□□□□ -2.68
LIMK1P53667 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.66□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 334.8 ms