Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MIR3115-201ENST00000577915 68 ntBASIC-0.97□□□□□ -2.56
PDX1P52945 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.98□□□□□ -2.57
PDX1P52945 AL353691.2-201ENST00000443795 59 ntBASIC-0.98□□□□□ -2.57
PDX1P52945 MIR8053-201ENST00000613344 75 ntBASIC-0.98□□□□□ -2.57
PDX1P52945 SNORD113.1-201ENST00000363280 73 ntBASIC-0.99□□□□□ -2.57
PDX1P52945 RNU6-587P-201ENST00000391282 106 ntBASIC-0.99□□□□□ -2.57
PDX1P52945 Y_RNA.74-201ENST00000362911 99 ntBASIC-1□□□□□ -2.57
PDX1P52945 RNA5SP192-201ENST00000364404 120 ntBASIC-1□□□□□ -2.57
PDX1P52945 Y_RNA.282-201ENST00000364793 102 ntBASIC-1□□□□□ -2.57
PDX1P52945 RNU6-820P-201ENST00000384273 107 ntBASIC-1□□□□□ -2.57
PDX1P52945 AC090616.4-201ENST00000448026 115 ntBASIC-1□□□□□ -2.57
PDX1P52945 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 SNX3P1X-201ENST00000414887 175 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 MTND4LP1-201ENST00000446263 157 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.01□□□□□ -2.57
PDX1P52945 MIR6502-201ENST00000617296 76 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 U4.4-201ENST00000620626 117 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 AC091912.2-201ENST00000624798 167 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 MIR5683-201ENST00000636514 76 ntBASIC-1.01□□□□□ -2.57
PDX1P52945 RNU6-164P-201ENST00000364604 103 ntBASIC-1.02□□□□□ -2.57
PDX1P52945 MIR527-201ENST00000385244 85 ntBASIC-1.02□□□□□ -2.57
PDX1P52945 MIR889-201ENST00000401280 79 ntBASIC-1.02□□□□□ -2.57
PDX1P52945 MIR3165-201ENST00000579874 75 ntBASIC-1.02□□□□□ -2.57
PDX1P52945 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.03□□□□□ -2.57
PDX1P52945 MIR507-201ENST00000385234 94 ntBASIC-1.03□□□□□ -2.57
PDX1P52945 MIR548V-201ENST00000584165 80 ntBASIC-1.03□□□□□ -2.57
PDX1P52945 MIR6874-201ENST00000635894 71 ntBASIC-1.03□□□□□ -2.57
PDX1P52945 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.04□□□□□ -2.58
PDX1P52945 RNU6-698P-201ENST00000363523 107 ntBASIC-1.04□□□□□ -2.58
PDX1P52945 RNU6-598P-201ENST00000364017 105 ntBASIC-1.04□□□□□ -2.58
PDX1P52945 RNU6-34P-201ENST00000364874 107 ntBASIC-1.04□□□□□ -2.58
PDX1P52945 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.04□□□□□ -2.58
PDX1P52945 RNU6-70P-201ENST00000516438 60 ntBASIC-1.04□□□□□ -2.58
PDX1P52945 RNU6-668P-201ENST00000364180 107 ntBASIC-1.05□□□□□ -2.58
PDX1P52945 RNU6-458P-201ENST00000384179 107 ntBASIC-1.05□□□□□ -2.58
PDX1P52945 RPL35AP4-201ENST00000412007 102 ntBASIC-1.05□□□□□ -2.58
PDX1P52945 RNA5SP461-201ENST00000516451 104 ntBASIC-1.05□□□□□ -2.58
PDX1P52945 MIR3134-201ENST00000579433 74 ntBASIC-1.05□□□□□ -2.58
PDX1P52945 U6.58-201ENST00000613107 107 ntBASIC-1.05□□□□□ -2.58
PDX1P52945 SNORD73B-201ENST00000364394 72 ntBASIC-1.06□□□□□ -2.58
PDX1P52945 RNU6-608P-201ENST00000383927 104 ntBASIC-1.06□□□□□ -2.58
PDX1P52945 MIR520D-201ENST00000385002 87 ntBASIC-1.06□□□□□ -2.58
PDX1P52945 RNU6-576P-201ENST00000390854 102 ntBASIC-1.06□□□□□ -2.58
PDX1P52945 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.07□□□□□ -2.58
PDX1P52945 MIR154-201ENST00000385243 84 ntBASIC-1.07□□□□□ -2.58
PDX1P52945 RNU6-696P-201ENST00000390834 107 ntBASIC-1.08□□□□□ -2.58
PDX1P52945 AC138207.3-201ENST00000585289 166 ntBASIC-1.08□□□□□ -2.58
PDX1P52945 RNU6-79P-201ENST00000362511 107 ntBASIC-1.09□□□□□ -2.58
PDX1P52945 MIR630-201ENST00000384957 97 ntBASIC-1.09□□□□□ -2.58
PDX1P52945 MIR4320-201ENST00000636981 65 ntBASIC-1.09□□□□□ -2.58
PDX1P52945 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.1□□□□□ -2.59
PDX1P52945 RNA5SP215-201ENST00000363440 122 ntBASIC-1.1□□□□□ -2.59
PDX1P52945 SNORD115-31-201ENST00000365318 82 ntBASIC-1.1□□□□□ -2.59
PDX1P52945 RNU6-706P-201ENST00000517229 104 ntBASIC-1.1□□□□□ -2.59
PDX1P52945 MIR4490-201ENST00000582647 84 ntBASIC-1.1□□□□□ -2.59
PDX1P52945 MIR198-201ENST00000637333 62 ntBASIC-1.1□□□□□ -2.59
PDX1P52945 SNORD116-24-201ENST00000384549 92 ntBASIC-1.11□□□□□ -2.59
PDX1P52945 SNORD113-2-201ENST00000391082 72 ntBASIC-1.11□□□□□ -2.59
PDX1P52945 RNU6-630P-201ENST00000391258 106 ntBASIC-1.11□□□□□ -2.59
PDX1P52945 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.12□□□□□ -2.59
PDX1P52945 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.12□□□□□ -2.59
PDX1P52945 MIR1468-201ENST00000410600 86 ntBASIC-1.12□□□□□ -2.59
PDX1P52945 RNY4P29-201ENST00000410801 97 ntBASIC-1.12□□□□□ -2.59
PDX1P52945 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.13□□□□□ -2.59
PDX1P52945 SNORA41B-201ENST00000384785 128 ntBASIC-1.13□□□□□ -2.59
PDX1P52945 MIR548Q-201ENST00000408404 100 ntBASIC-1.13□□□□□ -2.59
PDX1P52945 RNU6-687P-201ENST00000516443 89 ntBASIC-1.13□□□□□ -2.59
PDX1P52945 U2.18-201ENST00000622185 84 ntBASIC-1.13□□□□□ -2.59
PDX1P52945 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.14□□□□□ -2.59
PDX1P52945 RNU6-895P-201ENST00000384125 103 ntBASIC-1.14□□□□□ -2.59
PDX1P52945 MIR5591-201ENST00000578248 65 ntBASIC-1.14□□□□□ -2.59
PDX1P52945 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.15□□□□□ -2.59
PDX1P52945 RNA5SP173-201ENST00000364857 136 ntBASIC-1.15□□□□□ -2.59
PDX1P52945 RNU6-573P-201ENST00000383938 106 ntBASIC-1.15□□□□□ -2.59
PDX1P52945 RNU6-258P-201ENST00000390884 101 ntBASIC-1.15□□□□□ -2.59
PDX1P52945 SNORA26.2-201ENST00000390922 122 ntBASIC-1.15□□□□□ -2.59
PDX1P52945 MIR4770-201ENST00000579149 58 ntBASIC-1.15□□□□□ -2.59
PDX1P52945 MIR3202-2-201ENST00000635980 79 ntBASIC-1.15□□□□□ -2.59
PDX1P52945 MIR4520-1-201ENST00000582609 70 ntBASIC-1.16□□□□□ -2.6
PDX1P52945 MIR3170-201ENST00000582699 77 ntBASIC-1.16□□□□□ -2.6
PDX1P52945 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.17□□□□□ -2.6
PDX1P52945 SNORD116-16-201ENST00000384533 92 ntBASIC-1.17□□□□□ -2.6
PDX1P52945 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.17□□□□□ -2.6
PDX1P52945 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.17□□□□□ -2.6
PDX1P52945 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.17□□□□□ -2.6
PDX1P52945 MIR429-201ENST00000362106 83 ntBASIC-1.18□□□□□ -2.6
PDX1P52945 RNU6-228P-201ENST00000362700 106 ntBASIC-1.18□□□□□ -2.6
PDX1P52945 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.18□□□□□ -2.6
PDX1P52945 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.18□□□□□ -2.6
PDX1P52945 RNU6-411P-201ENST00000384451 107 ntBASIC-1.18□□□□□ -2.6
PDX1P52945 RNA5SP86-201ENST00000390869 98 ntBASIC-1.18□□□□□ -2.6
PDX1P52945 HLA-S-202ENST00000425174 53 ntBASIC-1.18□□□□□ -2.6
PDX1P52945 MIR4723-201ENST00000585070 81 ntBASIC-1.19□□□□□ -2.6
PDX1P52945 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.19□□□□□ -2.6
PDX1P52945 AC018880.2-201ENST00000414265 201 ntBASIC-1.2□□□□□ -2.6
PDX1P52945 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.2□□□□□ -2.6
PDX1P52945 U7.4-201ENST00000614961 63 ntBASIC-1.2□□□□□ -2.6
PDX1P52945 SNORD1B-201ENST00000363091 84 ntBASIC-1.21□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms