Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SNORA42.1-201ENST00000363515 137 ntBASIC0.24□□□□□ -2.37
GDNFP39905 SNORD114-9-201ENST00000364370 72 ntBASIC0.24□□□□□ -2.37
GDNFP39905 AL451105.1-201ENST00000450005 189 ntBASIC0.24□□□□□ -2.37
GDNFP39905 RNU6-247P-201ENST00000362636 107 ntBASIC0.23□□□□□ -2.37
GDNFP39905 SNORD63.2-201ENST00000516303 64 ntBASIC0.23□□□□□ -2.37
GDNFP39905 MIR4280-201ENST00000582178 76 ntBASIC0.23□□□□□ -2.37
GDNFP39905 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
GDNFP39905 MTRNR2L9-201ENST00000622562 75 ntBASIC0.23□□□□□ -2.37
GDNFP39905 MIR548Q-201ENST00000408404 100 ntBASIC0.22□□□□□ -2.37
GDNFP39905 MIR330-201ENST00000362196 94 ntBASIC0.21□□□□□ -2.38
GDNFP39905 RNU6-929P-201ENST00000384429 107 ntBASIC0.21□□□□□ -2.38
GDNFP39905 MIR545-201ENST00000385085 106 ntBASIC0.2□□□□□ -2.38
GDNFP39905 SNORD19-201ENST00000391191 68 ntBASIC0.2□□□□□ -2.38
GDNFP39905 RNU6-1111P-201ENST00000391118 107 ntBASIC0.19□□□□□ -2.38
GDNFP39905 SNORD38.3-201ENST00000516599 73 ntBASIC0.19□□□□□ -2.38
GDNFP39905 SNORA62.5-201ENST00000516634 120 ntBASIC0.19□□□□□ -2.38
GDNFP39905 MIR8087-201ENST00000612745 78 ntBASIC0.19□□□□□ -2.38
GDNFP39905 RNU6-1233P-201ENST00000362922 102 ntBASIC0.18□□□□□ -2.38
GDNFP39905 SNORD49B-201ENST00000365172 72 ntBASIC0.18□□□□□ -2.38
GDNFP39905 RNA5SP457-201ENST00000363657 124 ntBASIC0.17□□□□□ -2.38
GDNFP39905 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
GDNFP39905 SNORD45.2-201ENST00000363552 72 ntBASIC0.16□□□□□ -2.38
GDNFP39905 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
GDNFP39905 RNU6-46P-201ENST00000383860 107 ntBASIC0.15□□□□□ -2.39
GDNFP39905 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
GDNFP39905 SNORD18.2-201ENST00000459604 70 ntBASIC0.15□□□□□ -2.39
GDNFP39905 RNA5SP330-201ENST00000517096 96 ntBASIC0.15□□□□□ -2.39
GDNFP39905 MIR548AL-201ENST00000578416 97 ntBASIC0.15□□□□□ -2.39
GDNFP39905 MIR4514-201ENST00000581410 57 ntBASIC0.15□□□□□ -2.39
GDNFP39905 MIR520D-201ENST00000385002 87 ntBASIC0.14□□□□□ -2.39
GDNFP39905 RNU6-258P-201ENST00000390884 101 ntBASIC0.14□□□□□ -2.39
GDNFP39905 MIR6851-201ENST00000617060 67 ntBASIC0.14□□□□□ -2.39
GDNFP39905 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
GDNFP39905 MIR29B1-201ENST00000385015 81 ntBASIC0.12□□□□□ -2.39
GDNFP39905 MIR1197-201ENST00000408818 88 ntBASIC0.12□□□□□ -2.39
GDNFP39905 AP002795.1-201ENST00000534879 84 ntBASIC0.12□□□□□ -2.39
GDNFP39905 Y_RNA.115-201ENST00000363272 98 ntBASIC0.11□□□□□ -2.39
GDNFP39905 Y_RNA.321-201ENST00000365149 102 ntBASIC0.11□□□□□ -2.39
GDNFP39905 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
GDNFP39905 RNU6-530P-201ENST00000391180 107 ntBASIC0.11□□□□□ -2.39
GDNFP39905 RNA5SP66-201ENST00000517178 101 ntBASIC0.11□□□□□ -2.39
GDNFP39905 RNA5SP63-201ENST00000391225 112 ntBASIC0.1□□□□□ -2.39
GDNFP39905 AL590491.3-201ENST00000610731 82 ntBASIC0.1□□□□□ -2.39
GDNFP39905 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.1□□□□□ -2.39
GDNFP39905 RNU6-986P-201ENST00000363133 102 ntBASIC0.09□□□□□ -2.4
GDNFP39905 Y_RNA.699-201ENST00000516803 93 ntBASIC0.09□□□□□ -2.4
GDNFP39905 SNORD74.6-201ENST00000364796 70 ntBASIC0.08□□□□□ -2.4
GDNFP39905 SNORD114-12-201ENST00000365400 75 ntBASIC0.08□□□□□ -2.4
GDNFP39905 MIR1468-201ENST00000410600 86 ntBASIC0.08□□□□□ -2.4
GDNFP39905 SNORD22.1-201ENST00000516331 125 ntBASIC0.08□□□□□ -2.4
GDNFP39905 MIR6718-201ENST00000616153 80 ntBASIC0.08□□□□□ -2.4
GDNFP39905 MIR518B-201ENST00000385127 83 ntBASIC0.07□□□□□ -2.4
GDNFP39905 SNORA26.4-201ENST00000391188 123 ntBASIC0.07□□□□□ -2.4
GDNFP39905 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
GDNFP39905 AC093726.3-201ENST00000637588 150 ntBASIC0.07□□□□□ -2.4
GDNFP39905 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.06□□□□□ -2.4
GDNFP39905 RNU6-742P-201ENST00000365289 107 ntBASIC0.05□□□□□ -2.4
GDNFP39905 AC104692.1-201ENST00000472406 90 ntBASIC0.05□□□□□ -2.4
GDNFP39905 MIR5683-201ENST00000636514 76 ntBASIC0.05□□□□□ -2.4
GDNFP39905 SNORA27.2-201ENST00000363365 126 ntBASIC0.04□□□□□ -2.4
GDNFP39905 AL353691.2-201ENST00000443795 59 ntBASIC0.04□□□□□ -2.4
GDNFP39905 MIR4263-201ENST00000584745 83 ntBASIC0.04□□□□□ -2.4
GDNFP39905 MIR4768-201ENST00000585270 74 ntBASIC0.04□□□□□ -2.4
GDNFP39905 RNU6-1204P-201ENST00000363948 107 ntBASIC0.03□□□□□ -2.4
GDNFP39905 SNORD115-33-201ENST00000363723 82 ntBASIC0.02□□□□□ -2.41
GDNFP39905 SNORD114-17-201ENST00000364699 75 ntBASIC0.02□□□□□ -2.41
GDNFP39905 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
GDNFP39905 RNU6-608P-201ENST00000383927 104 ntBASIC0.01□□□□□ -2.41
GDNFP39905 MIR204-201ENST00000385200 110 ntBASIC0.01□□□□□ -2.41
GDNFP39905 RNU6-1250P-201ENST00000391218 107 ntBASIC0.01□□□□□ -2.41
GDNFP39905 SNORD75.1-201ENST00000408373 60 ntBASIC0.01□□□□□ -2.41
GDNFP39905 AP000533.3-201ENST00000447704 118 ntBASIC0.01□□□□□ -2.41
GDNFP39905 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
GDNFP39905 RNA5SP257-201ENST00000363023 116 ntBASIC0□□□□□ -2.41
GDNFP39905 SNORA18.1-201ENST00000363418 128 ntBASIC0□□□□□ -2.41
GDNFP39905 RNA5SP169-201ENST00000517268 117 ntBASIC0□□□□□ -2.41
GDNFP39905 MIR3179-1-201ENST00000578940 84 ntBASIC0□□□□□ -2.41
GDNFP39905 MIR3179-2-201ENST00000579107 84 ntBASIC0□□□□□ -2.41
GDNFP39905 MIR3179-3-201ENST00000579566 84 ntBASIC0□□□□□ -2.41
GDNFP39905 MIR5190-201ENST00000581537 80 ntBASIC0□□□□□ -2.41
GDNFP39905 MIR2909-201ENST00000617113 69 ntBASIC0□□□□□ -2.41
GDNFP39905 MIR3179-4-201ENST00000617599 84 ntBASIC0□□□□□ -2.41
GDNFP39905 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.01□□□□□ -2.41
GDNFP39905 RNU6-721P-201ENST00000410155 105 ntBASIC-0.02□□□□□ -2.41
GDNFP39905 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
GDNFP39905 MIR3666-201ENST00000607845 111 ntBASIC-0.03□□□□□ -2.41
GDNFP39905 MIR4788-201ENST00000639104 80 ntBASIC-0.03□□□□□ -2.41
GDNFP39905 SNORD114-11-201ENST00000363738 75 ntBASIC-0.04□□□□□ -2.42
GDNFP39905 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
GDNFP39905 RPL35AP4-201ENST00000412007 102 ntBASIC-0.05□□□□□ -2.42
GDNFP39905 MIR4426-201ENST00000640330 63 ntBASIC-0.05□□□□□ -2.42
GDNFP39905 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.06□□□□□ -2.42
GDNFP39905 RNY3P8-201ENST00000411366 126 ntBASIC-0.06□□□□□ -2.42
GDNFP39905 SNORD4A-201ENST00000459174 72 ntBASIC-0.06□□□□□ -2.42
GDNFP39905 MIR1295B-201ENST00000636144 60 ntBASIC-0.06□□□□□ -2.42
GDNFP39905 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.07□□□□□ -2.42
GDNFP39905 RNU6-822P-201ENST00000362707 106 ntBASIC-0.07□□□□□ -2.42
GDNFP39905 MIR548H4-201ENST00000408689 111 ntBASIC-0.07□□□□□ -2.42
GDNFP39905 MIR202-201ENST00000362219 110 ntBASIC-0.08□□□□□ -2.42
GDNFP39905 MIR507-201ENST00000385234 94 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 300.8 ms