Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 U6.58-201ENST00000613107 107 ntBASIC-0.06□□□□□ -2.42
KRT9P35527 AL445584.3-201ENST00000617173 78 ntBASIC-0.06□□□□□ -2.42
KRT9P35527 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.07□□□□□ -2.42
KRT9P35527 RNU6-246P-201ENST00000384702 107 ntBASIC-0.07□□□□□ -2.42
KRT9P35527 MIR124-2-201ENST00000385081 109 ntBASIC-0.07□□□□□ -2.42
KRT9P35527 RNA5SP266-201ENST00000410273 108 ntBASIC-0.07□□□□□ -2.42
KRT9P35527 RNA5SP451-201ENST00000410588 110 ntBASIC-0.07□□□□□ -2.42
KRT9P35527 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.07□□□□□ -2.42
KRT9P35527 MIR4280-201ENST00000582178 76 ntBASIC-0.07□□□□□ -2.42
KRT9P35527 MIR6888-201ENST00000621977 67 ntBASIC-0.07□□□□□ -2.42
KRT9P35527 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 RNA5SP300-201ENST00000391197 107 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 RNU4-63P-201ENST00000411313 118 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 SNORD57-201ENST00000448188 72 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 MIR4464-201ENST00000580818 92 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 MIR3938-201ENST00000582157 103 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 MIR3666-201ENST00000607845 111 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 MIR8068-201ENST00000618032 68 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 AC093726.3-201ENST00000637588 150 ntBASIC-0.08□□□□□ -2.42
KRT9P35527 RNA5SP275-201ENST00000363936 118 ntBASIC-0.09□□□□□ -2.42
KRT9P35527 MIR204-201ENST00000385200 110 ntBASIC-0.09□□□□□ -2.42
KRT9P35527 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
KRT9P35527 AC114755.3-201ENST00000481111 251 ntBASIC-0.09□□□□□ -2.42
KRT9P35527 AL590491.3-201ENST00000610731 82 ntBASIC-0.09□□□□□ -2.42
KRT9P35527 MIR4788-201ENST00000639104 80 ntBASIC-0.09□□□□□ -2.42
KRT9P35527 SNORA32.3-201ENST00000384772 121 ntBASIC-0.1□□□□□ -2.43
KRT9P35527 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.1□□□□□ -2.43
KRT9P35527 SNORD126-201ENST00000459475 77 ntBASIC-0.1□□□□□ -2.43
KRT9P35527 RNU6-320P-201ENST00000516511 106 ntBASIC-0.1□□□□□ -2.43
KRT9P35527 SNORD38.3-201ENST00000516599 73 ntBASIC-0.1□□□□□ -2.43
KRT9P35527 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.1□□□□□ -2.43
KRT9P35527 RNY1P9-201ENST00000532431 109 ntBASIC-0.1□□□□□ -2.43
KRT9P35527 MIR548AX-201ENST00000580117 73 ntBASIC-0.1□□□□□ -2.43
KRT9P35527 SNORD114-11-201ENST00000363738 75 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 SNORD74.6-201ENST00000364796 70 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 SNORD14C-201ENST00000365382 88 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 MIR518B-201ENST00000385127 83 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 SNORD75.1-201ENST00000408373 60 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 MIR1468-201ENST00000410600 86 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 MIR548AZ-201ENST00000616567 95 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 MIR6851-201ENST00000617060 67 ntBASIC-0.11□□□□□ -2.43
KRT9P35527 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 RNU6-499P-201ENST00000365615 107 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 MIR196A2-201ENST00000385189 110 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 RNU7-88P-201ENST00000458752 63 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 RNU7-119P-201ENST00000459279 63 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 SNORD18.2-201ENST00000459604 70 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 U7.5-201ENST00000517224 61 ntBASIC-0.12□□□□□ -2.43
KRT9P35527 MT-TQ-201ENST00000387372 72 ntBASIC-0.13□□□□□ -2.43
KRT9P35527 RNU6-284P-201ENST00000411105 106 ntBASIC-0.13□□□□□ -2.43
KRT9P35527 SNX3P1X-201ENST00000414887 175 ntBASIC-0.13□□□□□ -2.43
KRT9P35527 MIR3681-201ENST00000580089 72 ntBASIC-0.13□□□□□ -2.43
KRT9P35527 SNORD114-14-201ENST00000362723 75 ntBASIC-0.14□□□□□ -2.43
KRT9P35527 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.14□□□□□ -2.43
KRT9P35527 RNU6-696P-201ENST00000390834 107 ntBASIC-0.14□□□□□ -2.43
KRT9P35527 RNU6-172P-201ENST00000411000 93 ntBASIC-0.14□□□□□ -2.43
KRT9P35527 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.14□□□□□ -2.43
KRT9P35527 RNU6-231P-201ENST00000517122 103 ntBASIC-0.14□□□□□ -2.43
KRT9P35527 RNA5SP169-201ENST00000517268 117 ntBASIC-0.14□□□□□ -2.43
KRT9P35527 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.14□□□□□ -2.43
KRT9P35527 MIR7110-201ENST00000612638 86 ntBASIC-0.14□□□□□ -2.43
KRT9P35527 SNORD1B-201ENST00000363091 84 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 RNU6-598P-201ENST00000364017 105 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 RNU6-520P-201ENST00000384717 104 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 MIR633-201ENST00000384821 98 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 SNORD116.2-201ENST00000391251 93 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 SNORA3B-201ENST00000391305 131 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 SNORA13-201ENST00000458790 133 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 MIR4723-201ENST00000585070 81 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 MIR4436A-201ENST00000585278 85 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 MIR4320-201ENST00000636981 65 ntBASIC-0.15□□□□□ -2.43
KRT9P35527 MIR587-201ENST00000384845 96 ntBASIC-0.16□□□□□ -2.44
KRT9P35527 MIR601-201ENST00000385256 79 ntBASIC-0.16□□□□□ -2.44
KRT9P35527 AC021146.6-201ENST00000514659 117 ntBASIC-0.16□□□□□ -2.44
KRT9P35527 SNORD22.1-201ENST00000516331 125 ntBASIC-0.16□□□□□ -2.44
KRT9P35527 U4.2-201ENST00000618561 85 ntBASIC-0.16□□□□□ -2.44
KRT9P35527 MIR548AA1-201ENST00000384971 97 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 RNU6-995P-201ENST00000391244 107 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 RNU6-721P-201ENST00000410155 105 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 SNORD63.1-201ENST00000516178 80 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 MIR3179-1-201ENST00000578940 84 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 MIR3179-2-201ENST00000579107 84 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 MIR3179-3-201ENST00000579566 84 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 MIR3179-4-201ENST00000617599 84 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 U2.18-201ENST00000622185 84 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 MIR198-201ENST00000637333 62 ntBASIC-0.17□□□□□ -2.44
KRT9P35527 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.18□□□□□ -2.44
KRT9P35527 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.18□□□□□ -2.44
KRT9P35527 RNU6-10P-201ENST00000384036 107 ntBASIC-0.18□□□□□ -2.44
KRT9P35527 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.18□□□□□ -2.44
KRT9P35527 MIR6738-201ENST00000619620 64 ntBASIC-0.18□□□□□ -2.44
KRT9P35527 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.19□□□□□ -2.44
KRT9P35527 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.19□□□□□ -2.44
KRT9P35527 AP000533.3-201ENST00000447704 118 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 253.8 ms