Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.39□□□□□ -2.63
SHMT2P34897 MIR1297-201ENST00000637311 77 ntBASIC-1.39□□□□□ -2.63
SHMT2P34897 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.4□□□□□ -2.63
SHMT2P34897 RNU6-668P-201ENST00000364180 107 ntBASIC-1.4□□□□□ -2.63
SHMT2P34897 RNU6-755P-201ENST00000364400 103 ntBASIC-1.4□□□□□ -2.63
SHMT2P34897 SNORD116-24-201ENST00000384549 92 ntBASIC-1.4□□□□□ -2.63
SHMT2P34897 MIR548AA1-201ENST00000384971 97 ntBASIC-1.4□□□□□ -2.63
SHMT2P34897 MTND4LP1-201ENST00000446263 157 ntBASIC-1.4□□□□□ -2.63
SHMT2P34897 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.41□□□□□ -2.64
SHMT2P34897 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.41□□□□□ -2.64
SHMT2P34897 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.41□□□□□ -2.64
SHMT2P34897 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.41□□□□□ -2.64
SHMT2P34897 RNU6-844P-201ENST00000517175 102 ntBASIC-1.41□□□□□ -2.64
SHMT2P34897 AC005520.4-201ENST00000604337 90 ntBASIC-1.41□□□□□ -2.64
SHMT2P34897 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 RNU6-540P-201ENST00000384622 101 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 RNU6-695P-201ENST00000391157 104 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 MIR8053-201ENST00000613344 75 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 MIR7978-201ENST00000636158 59 ntBASIC-1.42□□□□□ -2.64
SHMT2P34897 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.43□□□□□ -2.64
SHMT2P34897 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.43□□□□□ -2.64
SHMT2P34897 RNU7-151P-201ENST00000516930 53 ntBASIC-1.43□□□□□ -2.64
SHMT2P34897 MIR23C-201ENST00000579846 100 ntBASIC-1.43□□□□□ -2.64
SHMT2P34897 AC013734.1-201ENST00000619329 111 ntBASIC-1.43□□□□□ -2.64
SHMT2P34897 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.43□□□□□ -2.64
SHMT2P34897 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.44□□□□□ -2.64
SHMT2P34897 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.44□□□□□ -2.64
SHMT2P34897 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.44□□□□□ -2.64
SHMT2P34897 MIR548M-201ENST00000408260 86 ntBASIC-1.44□□□□□ -2.64
SHMT2P34897 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.44□□□□□ -2.64
SHMT2P34897 RNU6-315P-201ENST00000362666 107 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 SNORA63.4-201ENST00000362763 126 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 RNU6-669P-201ENST00000365575 107 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 RNU6-147P-201ENST00000383983 107 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 RNU6-974P-201ENST00000384099 108 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 MIR579-201ENST00000385221 98 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 SNX3P1X-201ENST00000414887 175 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 MIR3123-201ENST00000583417 75 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.45□□□□□ -2.64
SHMT2P34897 RNU6-979P-201ENST00000383896 107 ntBASIC-1.46□□□□□ -2.64
SHMT2P34897 RNU6-49P-201ENST00000384256 107 ntBASIC-1.46□□□□□ -2.64
SHMT2P34897 MIR125B1-201ENST00000385236 88 ntBASIC-1.46□□□□□ -2.64
SHMT2P34897 RNA5SP180-201ENST00000516181 101 ntBASIC-1.46□□□□□ -2.64
SHMT2P34897 RNU6-313P-201ENST00000516317 112 ntBASIC-1.46□□□□□ -2.64
SHMT2P34897 MIR5588-201ENST00000581890 63 ntBASIC-1.46□□□□□ -2.64
SHMT2P34897 RNU6-228P-201ENST00000362700 106 ntBASIC-1.47□□□□□ -2.64
SHMT2P34897 SNORD18.1-201ENST00000363807 70 ntBASIC-1.47□□□□□ -2.64
SHMT2P34897 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.47□□□□□ -2.64
SHMT2P34897 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.47□□□□□ -2.64
SHMT2P34897 MIR1285-2-201ENST00000408311 88 ntBASIC-1.47□□□□□ -2.64
SHMT2P34897 AC108019.1-201ENST00000512540 175 ntBASIC-1.47□□□□□ -2.64
SHMT2P34897 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 SNORD115-31-201ENST00000365318 82 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 RNU6-32P-201ENST00000383948 107 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 RNU6-13P-201ENST00000384248 107 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 RNU6-12P-201ENST00000384604 107 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 RNU6-41P-201ENST00000384741 107 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 RNU6-172P-201ENST00000411000 93 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 MIR1246-201ENST00000636535 73 ntBASIC-1.48□□□□□ -2.65
SHMT2P34897 RNU6-247P-201ENST00000362636 107 ntBASIC-1.49□□□□□ -2.65
SHMT2P34897 SNORD63.2-201ENST00000516303 64 ntBASIC-1.49□□□□□ -2.65
SHMT2P34897 MIR3910-1-201ENST00000580936 111 ntBASIC-1.49□□□□□ -2.65
SHMT2P34897 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.5□□□□□ -2.65
SHMT2P34897 SNORA27.2-201ENST00000363365 126 ntBASIC-1.5□□□□□ -2.65
SHMT2P34897 SNORD113-1-201ENST00000365321 69 ntBASIC-1.5□□□□□ -2.65
SHMT2P34897 RNU6-841P-201ENST00000383872 107 ntBASIC-1.5□□□□□ -2.65
SHMT2P34897 RNU6-523P-201ENST00000516304 54 ntBASIC-1.5□□□□□ -2.65
SHMT2P34897 MIR4756-201ENST00000577874 78 ntBASIC-1.5□□□□□ -2.65
SHMT2P34897 MIR4712-201ENST00000583750 82 ntBASIC-1.5□□□□□ -2.65
SHMT2P34897 MIR548AM-201ENST00000584298 74 ntBASIC-1.5□□□□□ -2.65
SHMT2P34897 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.51□□□□□ -2.65
SHMT2P34897 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.51□□□□□ -2.65
SHMT2P34897 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.51□□□□□ -2.65
SHMT2P34897 RNY3P8-201ENST00000411366 126 ntBASIC-1.51□□□□□ -2.65
SHMT2P34897 RNA5SP173-201ENST00000364857 136 ntBASIC-1.52□□□□□ -2.65
SHMT2P34897 RNU7-171P-201ENST00000459581 62 ntBASIC-1.52□□□□□ -2.65
SHMT2P34897 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.53□□□□□ -2.65
SHMT2P34897 RNU6-215P-201ENST00000365169 102 ntBASIC-1.53□□□□□ -2.65
SHMT2P34897 MIR601-201ENST00000385256 79 ntBASIC-1.53□□□□□ -2.65
SHMT2P34897 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
SHMT2P34897 RNU6-380P-201ENST00000410207 107 ntBASIC-1.53□□□□□ -2.65
SHMT2P34897 RNU6-70P-201ENST00000516438 60 ntBASIC-1.53□□□□□ -2.65
SHMT2P34897 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.53□□□□□ -2.65
SHMT2P34897 MIR3134-201ENST00000579433 74 ntBASIC-1.53□□□□□ -2.65
SHMT2P34897 MIR548AI-201ENST00000579940 88 ntBASIC-1.53□□□□□ -2.65
SHMT2P34897 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.54□□□□□ -2.66
SHMT2P34897 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.54□□□□□ -2.66
SHMT2P34897 RNU6-995P-201ENST00000391244 107 ntBASIC-1.54□□□□□ -2.66
SHMT2P34897 RNU6-983P-201ENST00000516004 103 ntBASIC-1.54□□□□□ -2.66
SHMT2P34897 RNU6-687P-201ENST00000516443 89 ntBASIC-1.54□□□□□ -2.66
SHMT2P34897 MIR1245B-201ENST00000636115 69 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms