Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 MIR6738-201ENST00000619620 64 ntBASIC-0.94□□□□□ -2.56
RPA1P27694 RNA5SP26-201ENST00000362406 119 ntBASIC-0.95□□□□□ -2.56
RPA1P27694 RNU6-242P-201ENST00000384359 107 ntBASIC-0.95□□□□□ -2.56
RPA1P27694 SNORA41B-201ENST00000384785 128 ntBASIC-0.95□□□□□ -2.56
RPA1P27694 RNU6-668P-201ENST00000364180 107 ntBASIC-0.96□□□□□ -2.56
RPA1P27694 MIR527-201ENST00000385244 85 ntBASIC-0.96□□□□□ -2.56
RPA1P27694 MIR8053-201ENST00000613344 75 ntBASIC-0.96□□□□□ -2.56
RPA1P27694 U2.18-201ENST00000622185 84 ntBASIC-0.96□□□□□ -2.56
RPA1P27694 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.97□□□□□ -2.56
RPA1P27694 RNA5SP476-201ENST00000516613 103 ntBASIC-0.97□□□□□ -2.56
RPA1P27694 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.97□□□□□ -2.56
RPA1P27694 uc_338.19-201ENST00000616808 99 ntBASIC-0.97□□□□□ -2.56
RPA1P27694 RNA5SP173-201ENST00000364857 136 ntBASIC-0.98□□□□□ -2.57
RPA1P27694 RNU6-820P-201ENST00000384273 107 ntBASIC-0.98□□□□□ -2.57
RPA1P27694 RNU6-380P-201ENST00000410207 107 ntBASIC-0.98□□□□□ -2.57
RPA1P27694 RPL35AP4-201ENST00000412007 102 ntBASIC-0.98□□□□□ -2.57
RPA1P27694 MTND4LP1-201ENST00000446263 157 ntBASIC-0.98□□□□□ -2.57
RPA1P27694 MIR378F-201ENST00000578143 78 ntBASIC-0.98□□□□□ -2.57
RPA1P27694 MIR154-201ENST00000385243 84 ntBASIC-0.99□□□□□ -2.57
RPA1P27694 RNU6-228P-201ENST00000362700 106 ntBASIC-1□□□□□ -2.57
RPA1P27694 RNU6-10P-201ENST00000384036 107 ntBASIC-1□□□□□ -2.57
RPA1P27694 MIR507-201ENST00000385234 94 ntBASIC-1□□□□□ -2.57
RPA1P27694 RNY4P29-201ENST00000410801 97 ntBASIC-1□□□□□ -2.57
RPA1P27694 RNA5SP67-201ENST00000516422 131 ntBASIC-1□□□□□ -2.57
RPA1P27694 RNU6-1015P-201ENST00000517121 99 ntBASIC-1□□□□□ -2.57
RPA1P27694 MIR5683-201ENST00000636514 76 ntBASIC-1□□□□□ -2.57
RPA1P27694 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.01□□□□□ -2.57
RPA1P27694 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.01□□□□□ -2.57
RPA1P27694 RNA5SP215-201ENST00000363440 122 ntBASIC-1.01□□□□□ -2.57
RPA1P27694 MIR520D-201ENST00000385002 87 ntBASIC-1.01□□□□□ -2.57
RPA1P27694 AL353691.2-201ENST00000443795 59 ntBASIC-1.01□□□□□ -2.57
RPA1P27694 RNU6-523P-201ENST00000516304 54 ntBASIC-1.01□□□□□ -2.57
RPA1P27694 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.02□□□□□ -2.57
RPA1P27694 RNU6-24P-201ENST00000384440 107 ntBASIC-1.02□□□□□ -2.57
RPA1P27694 RNU6-696P-201ENST00000390834 107 ntBASIC-1.02□□□□□ -2.57
RPA1P27694 SNORD57-201ENST00000448188 72 ntBASIC-1.02□□□□□ -2.57
RPA1P27694 snoU83B.1-201ENST00000517136 88 ntBASIC-1.02□□□□□ -2.57
RPA1P27694 MIR587-201ENST00000384845 96 ntBASIC-1.03□□□□□ -2.57
RPA1P27694 MIR1255A-201ENST00000408338 113 ntBASIC-1.03□□□□□ -2.57
RPA1P27694 MIR6818-201ENST00000621576 65 ntBASIC-1.03□□□□□ -2.57
RPA1P27694 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.04□□□□□ -2.58
RPA1P27694 MIR548Q-201ENST00000408404 100 ntBASIC-1.04□□□□□ -2.58
RPA1P27694 SNORD1B-201ENST00000363091 84 ntBASIC-1.05□□□□□ -2.58
RPA1P27694 SNORD116-16-201ENST00000384533 92 ntBASIC-1.05□□□□□ -2.58
RPA1P27694 RNU6-540P-201ENST00000384622 101 ntBASIC-1.05□□□□□ -2.58
RPA1P27694 RNU6-630P-201ENST00000391258 106 ntBASIC-1.05□□□□□ -2.58
RPA1P27694 MIR889-201ENST00000401280 79 ntBASIC-1.05□□□□□ -2.58
RPA1P27694 RNA5SP192-201ENST00000364404 120 ntBASIC-1.07□□□□□ -2.58
RPA1P27694 RNU6-895P-201ENST00000384125 103 ntBASIC-1.07□□□□□ -2.58
RPA1P27694 MIR8485-201ENST00000401372 91 ntBASIC-1.07□□□□□ -2.58
RPA1P27694 RNA5SP225-201ENST00000410874 135 ntBASIC-1.07□□□□□ -2.58
RPA1P27694 AC090616.4-201ENST00000448026 115 ntBASIC-1.07□□□□□ -2.58
RPA1P27694 HAR1A.1-201ENST00000459583 118 ntBASIC-1.07□□□□□ -2.58
RPA1P27694 RNU6-608P-201ENST00000383927 104 ntBASIC-1.08□□□□□ -2.58
RPA1P27694 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
RPA1P27694 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
RPA1P27694 SNORA26.2-201ENST00000390922 122 ntBASIC-1.08□□□□□ -2.58
RPA1P27694 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.08□□□□□ -2.58
RPA1P27694 RNY1P9-201ENST00000532431 109 ntBASIC-1.08□□□□□ -2.58
RPA1P27694 MIR3115-201ENST00000577915 68 ntBASIC-1.08□□□□□ -2.58
RPA1P27694 MIR4679-1-201ENST00000637619 75 ntBASIC-1.08□□□□□ -2.58
RPA1P27694 MIR29B1-201ENST00000385015 81 ntBASIC-1.09□□□□□ -2.58
RPA1P27694 RNU6-857P-201ENST00000515893 110 ntBASIC-1.09□□□□□ -2.58
RPA1P27694 MIR3165-201ENST00000579874 75 ntBASIC-1.09□□□□□ -2.58
RPA1P27694 U7.4-201ENST00000614961 63 ntBASIC-1.09□□□□□ -2.58
RPA1P27694 RNU6-411P-201ENST00000384451 107 ntBASIC-1.1□□□□□ -2.59
RPA1P27694 RNU6-258P-201ENST00000390884 101 ntBASIC-1.1□□□□□ -2.59
RPA1P27694 MIR4306-201ENST00000583390 91 ntBASIC-1.1□□□□□ -2.59
RPA1P27694 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.11□□□□□ -2.59
RPA1P27694 MIR579-201ENST00000385221 98 ntBASIC-1.12□□□□□ -2.59
RPA1P27694 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.12□□□□□ -2.59
RPA1P27694 MIR3170-201ENST00000582699 77 ntBASIC-1.12□□□□□ -2.59
RPA1P27694 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.12□□□□□ -2.59
RPA1P27694 MIR6874-201ENST00000635894 71 ntBASIC-1.12□□□□□ -2.59
RPA1P27694 MIR409-201ENST00000362237 79 ntBASIC-1.13□□□□□ -2.59
RPA1P27694 RNU6-634P-201ENST00000459134 106 ntBASIC-1.13□□□□□ -2.59
RPA1P27694 MIR4490-201ENST00000582647 84 ntBASIC-1.13□□□□□ -2.59
RPA1P27694 RNU6-279P-201ENST00000391297 101 ntBASIC-1.14□□□□□ -2.59
RPA1P27694 AC091912.2-201ENST00000624798 167 ntBASIC-1.14□□□□□ -2.59
RPA1P27694 MIR3202-2-201ENST00000635980 79 ntBASIC-1.14□□□□□ -2.59
RPA1P27694 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
RPA1P27694 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.15□□□□□ -2.59
RPA1P27694 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.16□□□□□ -2.6
RPA1P27694 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.16□□□□□ -2.6
RPA1P27694 RNU6-663P-201ENST00000391105 106 ntBASIC-1.16□□□□□ -2.6
RPA1P27694 RNU7-151P-201ENST00000516930 53 ntBASIC-1.16□□□□□ -2.6
RPA1P27694 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.16□□□□□ -2.6
RPA1P27694 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.17□□□□□ -2.6
RPA1P27694 SNORD78.1-201ENST00000390866 65 ntBASIC-1.17□□□□□ -2.6
RPA1P27694 RNA5SP266-201ENST00000410273 108 ntBASIC-1.17□□□□□ -2.6
RPA1P27694 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.17□□□□□ -2.6
RPA1P27694 RNU6-172P-201ENST00000411000 93 ntBASIC-1.17□□□□□ -2.6
RPA1P27694 RNU6-542P-201ENST00000516405 103 ntBASIC-1.17□□□□□ -2.6
RPA1P27694 MIR7978-201ENST00000636158 59 ntBASIC-1.17□□□□□ -2.6
RPA1P27694 MIR429-201ENST00000362106 83 ntBASIC-1.18□□□□□ -2.6
RPA1P27694 SNORD60.1-201ENST00000362451 73 ntBASIC-1.18□□□□□ -2.6
RPA1P27694 RNU6-974P-201ENST00000384099 108 ntBASIC-1.18□□□□□ -2.6
RPA1P27694 RNU6-706P-201ENST00000517229 104 ntBASIC-1.18□□□□□ -2.6
RPA1P27694 RNU6-164P-201ENST00000364604 103 ntBASIC-1.19□□□□□ -2.6
RPA1P27694 MIR548AA1-201ENST00000384971 97 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms