Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
VARSP26640 Y_RNA.321-201ENST00000365149 102 ntBASIC0.53□□□□□ -2.32
VARSP26640 SNORD56B-201ENST00000384713 71 ntBASIC0.53□□□□□ -2.32
VARSP26640 RNU6-530P-201ENST00000391180 107 ntBASIC0.53□□□□□ -2.32
VARSP26640 Y_RNA.68-201ENST00000362881 102 ntBASIC0.52□□□□□ -2.33
VARSP26640 RNA5SP257-201ENST00000363023 116 ntBASIC0.51□□□□□ -2.33
VARSP26640 SNORA42.1-201ENST00000363515 137 ntBASIC0.51□□□□□ -2.33
VARSP26640 MIR610-201ENST00000385139 96 ntBASIC0.51□□□□□ -2.33
VARSP26640 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
VARSP26640 AC244250.2-201ENST00000418731 148 ntBASIC0.5□□□□□ -2.33
VARSP26640 AC114755.3-201ENST00000481111 251 ntBASIC0.5□□□□□ -2.33
VARSP26640 SNORA62.5-201ENST00000516634 120 ntBASIC0.5□□□□□ -2.33
VARSP26640 RNU6-1327P-201ENST00000365302 105 ntBASIC0.49□□□□□ -2.33
VARSP26640 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
VARSP26640 SNORD19-201ENST00000391191 68 ntBASIC0.49□□□□□ -2.33
VARSP26640 RNU6-721P-201ENST00000410155 105 ntBASIC0.49□□□□□ -2.33
VARSP26640 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
VARSP26640 RNU6-1233P-201ENST00000362922 102 ntBASIC0.48□□□□□ -2.33
VARSP26640 RNU6-1250P-201ENST00000391218 107 ntBASIC0.48□□□□□ -2.33
VARSP26640 AL445193.1-201ENST00000441183 141 ntBASIC0.48□□□□□ -2.33
VARSP26640 MIR4315-1-201ENST00000636800 73 ntBASIC0.48□□□□□ -2.33
VARSP26640 MIR4315-2-201ENST00000640925 73 ntBASIC0.48□□□□□ -2.33
VARSP26640 RNU6-742P-201ENST00000365289 107 ntBASIC0.47□□□□□ -2.33
VARSP26640 Y_RNA.433-201ENST00000384089 102 ntBASIC0.47□□□□□ -2.33
VARSP26640 RNU6-822P-201ENST00000362707 106 ntBASIC0.46□□□□□ -2.34
VARSP26640 RNU6-258P-201ENST00000390884 101 ntBASIC0.46□□□□□ -2.34
VARSP26640 MIR145-201ENST00000384967 88 ntBASIC0.45□□□□□ -2.34
VARSP26640 MIR520D-201ENST00000385002 87 ntBASIC0.45□□□□□ -2.34
VARSP26640 MIR1468-201ENST00000410600 86 ntBASIC0.45□□□□□ -2.34
VARSP26640 Y_RNA.699-201ENST00000516803 93 ntBASIC0.45□□□□□ -2.34
VARSP26640 Y_RNA.178-201ENST00000363832 102 ntBASIC0.44□□□□□ -2.34
VARSP26640 RNU6-1008P-201ENST00000384160 104 ntBASIC0.44□□□□□ -2.34
VARSP26640 RNU7-165P-201ENST00000458864 60 ntBASIC0.44□□□□□ -2.34
VARSP26640 RNU7-159P-201ENST00000459284 62 ntBASIC0.44□□□□□ -2.34
VARSP26640 RNU6-724P-201ENST00000390958 105 ntBASIC0.42□□□□□ -2.34
VARSP26640 MIR1197-201ENST00000408818 88 ntBASIC0.42□□□□□ -2.34
VARSP26640 MIR4280-201ENST00000582178 76 ntBASIC0.42□□□□□ -2.34
VARSP26640 MIR4743-201ENST00000584576 69 ntBASIC0.41□□□□□ -2.34
VARSP26640 SNORA27.2-201ENST00000363365 126 ntBASIC0.4□□□□□ -2.35
VARSP26640 RNA5SP214-201ENST00000363378 118 ntBASIC0.4□□□□□ -2.35
VARSP26640 MIR655-201ENST00000362159 97 ntBASIC0.39□□□□□ -2.35
VARSP26640 RNA5SP134-201ENST00000516492 96 ntBASIC0.39□□□□□ -2.35
VARSP26640 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
VARSP26640 RNA5SP63-201ENST00000391225 112 ntBASIC0.38□□□□□ -2.35
VARSP26640 SNORD18.2-201ENST00000459604 70 ntBASIC0.38□□□□□ -2.35
VARSP26640 SNORD38.3-201ENST00000516599 73 ntBASIC0.38□□□□□ -2.35
VARSP26640 AP002795.1-201ENST00000534879 84 ntBASIC0.37□□□□□ -2.35
VARSP26640 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.37□□□□□ -2.35
VARSP26640 SNORD114-5-201ENST00000362928 70 ntBASIC0.36□□□□□ -2.35
VARSP26640 MIR548H4-201ENST00000408689 111 ntBASIC0.34□□□□□ -2.36
VARSP26640 SNORD49B-201ENST00000365172 72 ntBASIC0.33□□□□□ -2.36
VARSP26640 RNA5SP169-201ENST00000517268 117 ntBASIC0.33□□□□□ -2.36
VARSP26640 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
VARSP26640 MIR6851-201ENST00000617060 67 ntBASIC0.33□□□□□ -2.36
VARSP26640 MIR5683-201ENST00000636514 76 ntBASIC0.33□□□□□ -2.36
VARSP26640 SNORD114-9-201ENST00000364370 72 ntBASIC0.32□□□□□ -2.36
VARSP26640 RNU6-929P-201ENST00000384429 107 ntBASIC0.32□□□□□ -2.36
VARSP26640 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.32□□□□□ -2.36
VARSP26640 U6.103-201ENST00000637085 61 ntBASIC0.32□□□□□ -2.36
VARSP26640 MIR4426-201ENST00000640330 63 ntBASIC0.32□□□□□ -2.36
VARSP26640 SNORA26.4-201ENST00000391188 123 ntBASIC0.31□□□□□ -2.36
VARSP26640 MIR2909-201ENST00000617113 69 ntBASIC0.31□□□□□ -2.36
VARSP26640 AL353691.2-201ENST00000443795 59 ntBASIC0.3□□□□□ -2.36
VARSP26640 RNU6-46P-201ENST00000383860 107 ntBASIC0.29□□□□□ -2.36
VARSP26640 MIR4317-201ENST00000637586 65 ntBASIC0.29□□□□□ -2.36
VARSP26640 SNORD74.6-201ENST00000364796 70 ntBASIC0.28□□□□□ -2.36
VARSP26640 RNU6-59P-201ENST00000384787 107 ntBASIC0.28□□□□□ -2.36
VARSP26640 RNA5SP285-201ENST00000516619 119 ntBASIC0.28□□□□□ -2.36
VARSP26640 RNU6-608P-201ENST00000383927 104 ntBASIC0.27□□□□□ -2.37
VARSP26640 RNA5SP66-201ENST00000517178 101 ntBASIC0.26□□□□□ -2.37
VARSP26640 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
VARSP26640 SNORD115-33-201ENST00000363723 82 ntBASIC0.25□□□□□ -2.37
VARSP26640 MIR518B-201ENST00000385127 83 ntBASIC0.25□□□□□ -2.37
VARSP26640 SNORD22.1-201ENST00000516331 125 ntBASIC0.25□□□□□ -2.37
VARSP26640 MIR202-201ENST00000362219 110 ntBASIC0.24□□□□□ -2.37
VARSP26640 RNY3P8-201ENST00000411366 126 ntBASIC0.24□□□□□ -2.37
VARSP26640 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
VARSP26640 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
VARSP26640 RNU6-1326P-201ENST00000391262 107 ntBASIC0.23□□□□□ -2.37
VARSP26640 RNU6-361P-201ENST00000364454 107 ntBASIC0.22□□□□□ -2.37
VARSP26640 RNU6-1047P-201ENST00000364418 107 ntBASIC0.21□□□□□ -2.38
VARSP26640 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
VARSP26640 AC093726.3-201ENST00000637588 150 ntBASIC0.21□□□□□ -2.38
VARSP26640 RNA5SP476-201ENST00000516613 103 ntBASIC0.2□□□□□ -2.38
VARSP26640 RNY1P9-201ENST00000532431 109 ntBASIC0.2□□□□□ -2.38
VARSP26640 AL590491.3-201ENST00000610731 82 ntBASIC0.2□□□□□ -2.38
VARSP26640 SNORD114-17-201ENST00000364699 75 ntBASIC0.19□□□□□ -2.38
VARSP26640 Y_RNA.345-201ENST00000365384 92 ntBASIC0.19□□□□□ -2.38
VARSP26640 RNU6-300P-201ENST00000459080 104 ntBASIC0.19□□□□□ -2.38
VARSP26640 MIR4768-201ENST00000585270 74 ntBASIC0.18□□□□□ -2.38
VARSP26640 MIR6718-201ENST00000616153 80 ntBASIC0.18□□□□□ -2.38
VARSP26640 SNORA17.4-201ENST00000391287 132 ntBASIC0.17□□□□□ -2.38
VARSP26640 SNORD75.1-201ENST00000408373 60 ntBASIC0.17□□□□□ -2.38
VARSP26640 SNORD114-12-201ENST00000365400 75 ntBASIC0.16□□□□□ -2.38
VARSP26640 MIR204-201ENST00000385200 110 ntBASIC0.16□□□□□ -2.38
VARSP26640 RPL35AP4-201ENST00000412007 102 ntBASIC0.16□□□□□ -2.38
VARSP26640 AP000533.3-201ENST00000447704 118 ntBASIC0.16□□□□□ -2.38
VARSP26640 HAR1A.1-201ENST00000459583 118 ntBASIC0.16□□□□□ -2.38
VARSP26640 MIR4263-201ENST00000584745 83 ntBASIC0.16□□□□□ -2.38
VARSP26640 AC104692.1-201ENST00000472406 90 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms