Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
VARSP26640 Y_RNA.321-201ENST00000365149 102 ntBASIC0.53□□□□□ -2.32
VARSP26640 SNORD56B-201ENST00000384713 71 ntBASIC0.53□□□□□ -2.32
VARSP26640 RNU6-530P-201ENST00000391180 107 ntBASIC0.53□□□□□ -2.32
VARSP26640 Y_RNA.68-201ENST00000362881 102 ntBASIC0.52□□□□□ -2.33
VARSP26640 RNA5SP257-201ENST00000363023 116 ntBASIC0.51□□□□□ -2.33
VARSP26640 SNORA42.1-201ENST00000363515 137 ntBASIC0.51□□□□□ -2.33
VARSP26640 MIR610-201ENST00000385139 96 ntBASIC0.51□□□□□ -2.33
VARSP26640 AC090625.1-201ENST00000357130 210 ntBASIC0.5□□□□□ -2.33
VARSP26640 AC244250.2-201ENST00000418731 148 ntBASIC0.5□□□□□ -2.33
VARSP26640 AC114755.3-201ENST00000481111 251 ntBASIC0.5□□□□□ -2.33
VARSP26640 SNORA62.5-201ENST00000516634 120 ntBASIC0.5□□□□□ -2.33
VARSP26640 RNU6-1327P-201ENST00000365302 105 ntBASIC0.49□□□□□ -2.33
VARSP26640 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
VARSP26640 SNORD19-201ENST00000391191 68 ntBASIC0.49□□□□□ -2.33
VARSP26640 RNU6-721P-201ENST00000410155 105 ntBASIC0.49□□□□□ -2.33
VARSP26640 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
VARSP26640 RNU6-1233P-201ENST00000362922 102 ntBASIC0.48□□□□□ -2.33
VARSP26640 RNU6-1250P-201ENST00000391218 107 ntBASIC0.48□□□□□ -2.33
VARSP26640 AL445193.1-201ENST00000441183 141 ntBASIC0.48□□□□□ -2.33
VARSP26640 MIR4315-1-201ENST00000636800 73 ntBASIC0.48□□□□□ -2.33
VARSP26640 MIR4315-2-201ENST00000640925 73 ntBASIC0.48□□□□□ -2.33
VARSP26640 RNU6-742P-201ENST00000365289 107 ntBASIC0.47□□□□□ -2.33
VARSP26640 Y_RNA.433-201ENST00000384089 102 ntBASIC0.47□□□□□ -2.33
VARSP26640 RNU6-822P-201ENST00000362707 106 ntBASIC0.46□□□□□ -2.34
VARSP26640 RNU6-258P-201ENST00000390884 101 ntBASIC0.46□□□□□ -2.34
VARSP26640 MIR145-201ENST00000384967 88 ntBASIC0.45□□□□□ -2.34
VARSP26640 MIR520D-201ENST00000385002 87 ntBASIC0.45□□□□□ -2.34
VARSP26640 MIR1468-201ENST00000410600 86 ntBASIC0.45□□□□□ -2.34
VARSP26640 Y_RNA.699-201ENST00000516803 93 ntBASIC0.45□□□□□ -2.34
VARSP26640 Y_RNA.178-201ENST00000363832 102 ntBASIC0.44□□□□□ -2.34
VARSP26640 RNU6-1008P-201ENST00000384160 104 ntBASIC0.44□□□□□ -2.34
VARSP26640 RNU7-165P-201ENST00000458864 60 ntBASIC0.44□□□□□ -2.34
VARSP26640 RNU7-159P-201ENST00000459284 62 ntBASIC0.44□□□□□ -2.34
VARSP26640 RNU6-724P-201ENST00000390958 105 ntBASIC0.42□□□□□ -2.34
VARSP26640 MIR1197-201ENST00000408818 88 ntBASIC0.42□□□□□ -2.34
VARSP26640 MIR4280-201ENST00000582178 76 ntBASIC0.42□□□□□ -2.34
VARSP26640 MIR4743-201ENST00000584576 69 ntBASIC0.41□□□□□ -2.34
VARSP26640 SNORA27.2-201ENST00000363365 126 ntBASIC0.4□□□□□ -2.35
VARSP26640 RNA5SP214-201ENST00000363378 118 ntBASIC0.4□□□□□ -2.35
VARSP26640 MIR655-201ENST00000362159 97 ntBASIC0.39□□□□□ -2.35
VARSP26640 RNA5SP134-201ENST00000516492 96 ntBASIC0.39□□□□□ -2.35
VARSP26640 AC023932.2-201ENST00000603176 175 ntBASIC0.39□□□□□ -2.35
VARSP26640 RNA5SP63-201ENST00000391225 112 ntBASIC0.38□□□□□ -2.35
VARSP26640 SNORD18.2-201ENST00000459604 70 ntBASIC0.38□□□□□ -2.35
VARSP26640 SNORD38.3-201ENST00000516599 73 ntBASIC0.38□□□□□ -2.35
VARSP26640 AP002795.1-201ENST00000534879 84 ntBASIC0.37□□□□□ -2.35
VARSP26640 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.37□□□□□ -2.35
VARSP26640 SNORD114-5-201ENST00000362928 70 ntBASIC0.36□□□□□ -2.35
VARSP26640 MIR548H4-201ENST00000408689 111 ntBASIC0.34□□□□□ -2.36
VARSP26640 SNORD49B-201ENST00000365172 72 ntBASIC0.33□□□□□ -2.36
VARSP26640 RNA5SP169-201ENST00000517268 117 ntBASIC0.33□□□□□ -2.36
VARSP26640 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
VARSP26640 MIR6851-201ENST00000617060 67 ntBASIC0.33□□□□□ -2.36
VARSP26640 MIR5683-201ENST00000636514 76 ntBASIC0.33□□□□□ -2.36
VARSP26640 SNORD114-9-201ENST00000364370 72 ntBASIC0.32□□□□□ -2.36
VARSP26640 RNU6-929P-201ENST00000384429 107 ntBASIC0.32□□□□□ -2.36
VARSP26640 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.32□□□□□ -2.36
VARSP26640 U6.103-201ENST00000637085 61 ntBASIC0.32□□□□□ -2.36
VARSP26640 MIR4426-201ENST00000640330 63 ntBASIC0.32□□□□□ -2.36
VARSP26640 SNORA26.4-201ENST00000391188 123 ntBASIC0.31□□□□□ -2.36
VARSP26640 MIR2909-201ENST00000617113 69 ntBASIC0.31□□□□□ -2.36
VARSP26640 AL353691.2-201ENST00000443795 59 ntBASIC0.3□□□□□ -2.36
VARSP26640 RNU6-46P-201ENST00000383860 107 ntBASIC0.29□□□□□ -2.36
VARSP26640 MIR4317-201ENST00000637586 65 ntBASIC0.29□□□□□ -2.36
VARSP26640 SNORD74.6-201ENST00000364796 70 ntBASIC0.28□□□□□ -2.36
VARSP26640 RNU6-59P-201ENST00000384787 107 ntBASIC0.28□□□□□ -2.36
VARSP26640 RNA5SP285-201ENST00000516619 119 ntBASIC0.28□□□□□ -2.36
VARSP26640 RNU6-608P-201ENST00000383927 104 ntBASIC0.27□□□□□ -2.37
VARSP26640 RNA5SP66-201ENST00000517178 101 ntBASIC0.26□□□□□ -2.37
VARSP26640 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
VARSP26640 SNORD115-33-201ENST00000363723 82 ntBASIC0.25□□□□□ -2.37
VARSP26640 MIR518B-201ENST00000385127 83 ntBASIC0.25□□□□□ -2.37
VARSP26640 SNORD22.1-201ENST00000516331 125 ntBASIC0.25□□□□□ -2.37
VARSP26640 MIR202-201ENST00000362219 110 ntBASIC0.24□□□□□ -2.37
VARSP26640 RNY3P8-201ENST00000411366 126 ntBASIC0.24□□□□□ -2.37
VARSP26640 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
VARSP26640 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
VARSP26640 RNU6-1326P-201ENST00000391262 107 ntBASIC0.23□□□□□ -2.37
VARSP26640 RNU6-361P-201ENST00000364454 107 ntBASIC0.22□□□□□ -2.37
VARSP26640 RNU6-1047P-201ENST00000364418 107 ntBASIC0.21□□□□□ -2.38
VARSP26640 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
VARSP26640 AC093726.3-201ENST00000637588 150 ntBASIC0.21□□□□□ -2.38
VARSP26640 RNA5SP476-201ENST00000516613 103 ntBASIC0.2□□□□□ -2.38
VARSP26640 RNY1P9-201ENST00000532431 109 ntBASIC0.2□□□□□ -2.38
VARSP26640 AL590491.3-201ENST00000610731 82 ntBASIC0.2□□□□□ -2.38
VARSP26640 SNORD114-17-201ENST00000364699 75 ntBASIC0.19□□□□□ -2.38
VARSP26640 Y_RNA.345-201ENST00000365384 92 ntBASIC0.19□□□□□ -2.38
VARSP26640 RNU6-300P-201ENST00000459080 104 ntBASIC0.19□□□□□ -2.38
VARSP26640 MIR4768-201ENST00000585270 74 ntBASIC0.18□□□□□ -2.38
VARSP26640 MIR6718-201ENST00000616153 80 ntBASIC0.18□□□□□ -2.38
VARSP26640 SNORA17.4-201ENST00000391287 132 ntBASIC0.17□□□□□ -2.38
VARSP26640 SNORD75.1-201ENST00000408373 60 ntBASIC0.17□□□□□ -2.38
VARSP26640 SNORD114-12-201ENST00000365400 75 ntBASIC0.16□□□□□ -2.38
VARSP26640 MIR204-201ENST00000385200 110 ntBASIC0.16□□□□□ -2.38
VARSP26640 RPL35AP4-201ENST00000412007 102 ntBASIC0.16□□□□□ -2.38
VARSP26640 AP000533.3-201ENST00000447704 118 ntBASIC0.16□□□□□ -2.38
VARSP26640 HAR1A.1-201ENST00000459583 118 ntBASIC0.16□□□□□ -2.38
VARSP26640 MIR4263-201ENST00000584745 83 ntBASIC0.16□□□□□ -2.38
VARSP26640 AC104692.1-201ENST00000472406 90 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 569.7 ms