Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR3179-2-201ENST00000579107 84 ntBASIC-0.76□□□□□ -2.53
VAMP1P23763 MIR3179-3-201ENST00000579566 84 ntBASIC-0.76□□□□□ -2.53
VAMP1P23763 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
VAMP1P23763 MIR3179-4-201ENST00000617599 84 ntBASIC-0.76□□□□□ -2.53
VAMP1P23763 SNORD22.1-201ENST00000516331 125 ntBASIC-0.77□□□□□ -2.53
VAMP1P23763 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.78□□□□□ -2.53
VAMP1P23763 MIR630-201ENST00000384957 97 ntBASIC-0.78□□□□□ -2.53
VAMP1P23763 MIR196A1-201ENST00000388006 70 ntBASIC-0.78□□□□□ -2.53
VAMP1P23763 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.78□□□□□ -2.53
VAMP1P23763 MIR527-201ENST00000385244 85 ntBASIC-0.79□□□□□ -2.54
VAMP1P23763 RNA5SP169-201ENST00000517268 117 ntBASIC-0.79□□□□□ -2.54
VAMP1P23763 AL445584.3-201ENST00000617173 78 ntBASIC-0.79□□□□□ -2.54
VAMP1P23763 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.8□□□□□ -2.54
VAMP1P23763 MIR1468-201ENST00000410600 86 ntBASIC-0.8□□□□□ -2.54
VAMP1P23763 MIR6888-201ENST00000621977 67 ntBASIC-0.81□□□□□ -2.54
VAMP1P23763 RNU6-649P-201ENST00000384463 107 ntBASIC-0.82□□□□□ -2.54
VAMP1P23763 SNORD116-24-201ENST00000384549 92 ntBASIC-0.82□□□□□ -2.54
VAMP1P23763 SNORA3B-201ENST00000391305 131 ntBASIC-0.83□□□□□ -2.54
VAMP1P23763 RNA5SP461-201ENST00000516451 104 ntBASIC-0.83□□□□□ -2.54
VAMP1P23763 MIR378F-201ENST00000578143 78 ntBASIC-0.83□□□□□ -2.54
VAMP1P23763 MIR4320-201ENST00000636981 65 ntBASIC-0.83□□□□□ -2.54
VAMP1P23763 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.84□□□□□ -2.54
VAMP1P23763 AP000533.3-201ENST00000447704 118 ntBASIC-0.84□□□□□ -2.54
VAMP1P23763 RNU6-540P-201ENST00000384622 101 ntBASIC-0.85□□□□□ -2.55
VAMP1P23763 RNU6-630P-201ENST00000391258 106 ntBASIC-0.85□□□□□ -2.55
VAMP1P23763 RNU6-542P-201ENST00000516405 103 ntBASIC-0.85□□□□□ -2.55
VAMP1P23763 MIR4464-201ENST00000580818 92 ntBASIC-0.85□□□□□ -2.55
VAMP1P23763 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.86□□□□□ -2.55
VAMP1P23763 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.86□□□□□ -2.55
VAMP1P23763 SCARNA17-201ENST00000516183 144 ntBASIC-0.86□□□□□ -2.55
VAMP1P23763 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.87□□□□□ -2.55
VAMP1P23763 MIR4723-201ENST00000585070 81 ntBASIC-0.87□□□□□ -2.55
VAMP1P23763 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.88□□□□□ -2.55
VAMP1P23763 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.88□□□□□ -2.55
VAMP1P23763 MIR601-201ENST00000385256 79 ntBASIC-0.88□□□□□ -2.55
VAMP1P23763 SNORD83B-201ENST00000386745 93 ntBASIC-0.88□□□□□ -2.55
VAMP1P23763 RNU6-638P-201ENST00000516582 104 ntBASIC-0.9□□□□□ -2.55
VAMP1P23763 U4.4-201ENST00000620626 117 ntBASIC-0.9□□□□□ -2.55
VAMP1P23763 SNORD114-14-201ENST00000362723 75 ntBASIC-0.91□□□□□ -2.56
VAMP1P23763 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.91□□□□□ -2.56
VAMP1P23763 RNU6-523P-201ENST00000516304 54 ntBASIC-0.91□□□□□ -2.56
VAMP1P23763 SNORA25.4-201ENST00000363666 124 ntBASIC-0.93□□□□□ -2.56
VAMP1P23763 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
VAMP1P23763 RNU6-539P-201ENST00000516665 103 ntBASIC-0.93□□□□□ -2.56
VAMP1P23763 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.93□□□□□ -2.56
VAMP1P23763 RNA5SP192-201ENST00000364404 120 ntBASIC-0.94□□□□□ -2.56
VAMP1P23763 RNU6-458P-201ENST00000384179 107 ntBASIC-0.94□□□□□ -2.56
VAMP1P23763 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.94□□□□□ -2.56
VAMP1P23763 U6.58-201ENST00000613107 107 ntBASIC-0.94□□□□□ -2.56
VAMP1P23763 U4.2-201ENST00000618561 85 ntBASIC-0.94□□□□□ -2.56
VAMP1P23763 MIR3115-201ENST00000577915 68 ntBASIC-0.95□□□□□ -2.56
VAMP1P23763 RNU7-88P-201ENST00000458752 63 ntBASIC-0.96□□□□□ -2.56
VAMP1P23763 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.97□□□□□ -2.56
VAMP1P23763 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.97□□□□□ -2.56
VAMP1P23763 RNU6-721P-201ENST00000410155 105 ntBASIC-0.97□□□□□ -2.56
VAMP1P23763 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.98□□□□□ -2.57
VAMP1P23763 MIR548AG1-201ENST00000579932 66 ntBASIC-0.98□□□□□ -2.57
VAMP1P23763 U6.111-201ENST00000636093 83 ntBASIC-0.98□□□□□ -2.57
VAMP1P23763 U7.5-201ENST00000517224 61 ntBASIC-1□□□□□ -2.57
VAMP1P23763 MIR3165-201ENST00000579874 75 ntBASIC-1□□□□□ -2.57
VAMP1P23763 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.01□□□□□ -2.57
VAMP1P23763 SNORD114-17-201ENST00000364699 75 ntBASIC-1.01□□□□□ -2.57
VAMP1P23763 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.02□□□□□ -2.57
VAMP1P23763 MIR1285-2-201ENST00000408311 88 ntBASIC-1.02□□□□□ -2.57
VAMP1P23763 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.03□□□□□ -2.57
VAMP1P23763 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.03□□□□□ -2.57
VAMP1P23763 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.03□□□□□ -2.57
VAMP1P23763 RNU6-92P-201ENST00000605893 104 ntBASIC-1.03□□□□□ -2.57
VAMP1P23763 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.03□□□□□ -2.57
VAMP1P23763 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.03□□□□□ -2.57
VAMP1P23763 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.03□□□□□ -2.57
VAMP1P23763 MIR198-201ENST00000637333 62 ntBASIC-1.03□□□□□ -2.57
VAMP1P23763 MIR365A-201ENST00000362260 87 ntBASIC-1.04□□□□□ -2.58
VAMP1P23763 RNU6-246P-201ENST00000384702 107 ntBASIC-1.04□□□□□ -2.58
VAMP1P23763 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.05□□□□□ -2.58
VAMP1P23763 uc_338.19-201ENST00000616808 99 ntBASIC-1.05□□□□□ -2.58
VAMP1P23763 MIR1207-201ENST00000408249 87 ntBASIC-1.06□□□□□ -2.58
VAMP1P23763 AL500527.2-201ENST00000454105 95 ntBASIC-1.06□□□□□ -2.58
VAMP1P23763 SNORD116-16-201ENST00000384533 92 ntBASIC-1.07□□□□□ -2.58
VAMP1P23763 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
VAMP1P23763 MIR4499-201ENST00000584834 69 ntBASIC-1.08□□□□□ -2.58
VAMP1P23763 AC005520.4-201ENST00000604337 90 ntBASIC-1.08□□□□□ -2.58
VAMP1P23763 SNORD114-3-201ENST00000364969 75 ntBASIC-1.09□□□□□ -2.58
VAMP1P23763 RNU6-696P-201ENST00000390834 107 ntBASIC-1.09□□□□□ -2.58
VAMP1P23763 RNU6-732P-201ENST00000516033 103 ntBASIC-1.09□□□□□ -2.58
VAMP1P23763 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.1□□□□□ -2.59
VAMP1P23763 RNU6-800P-201ENST00000384473 103 ntBASIC-1.1□□□□□ -2.59
VAMP1P23763 MIR548Q-201ENST00000408404 100 ntBASIC-1.1□□□□□ -2.59
VAMP1P23763 MIR4441-201ENST00000582623 100 ntBASIC-1.11□□□□□ -2.59
VAMP1P23763 SNORA26.4-201ENST00000391188 123 ntBASIC-1.12□□□□□ -2.59
VAMP1P23763 AC114801.3-201ENST00000510231 177 ntBASIC-1.12□□□□□ -2.59
VAMP1P23763 RNA5SP180-201ENST00000516181 101 ntBASIC-1.12□□□□□ -2.59
VAMP1P23763 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.12□□□□□ -2.59
VAMP1P23763 AC103706.3-201ENST00000636297 85 ntBASIC-1.12□□□□□ -2.59
VAMP1P23763 SNORD115-33-201ENST00000363723 82 ntBASIC-1.13□□□□□ -2.59
VAMP1P23763 SNORD114-25-201ENST00000363742 72 ntBASIC-1.13□□□□□ -2.59
VAMP1P23763 SNORD63.1-201ENST00000516178 80 ntBASIC-1.13□□□□□ -2.59
VAMP1P23763 SNORA41B-201ENST00000384785 128 ntBASIC-1.14□□□□□ -2.59
VAMP1P23763 AL353691.2-201ENST00000443795 59 ntBASIC-1.14□□□□□ -2.59
VAMP1P23763 SNORA25.5-201ENST00000363782 126 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 215.4 ms