Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MIR6863-201ENST00000636112 90 ntBASIC-7.31□□□□□ -3.58
TOP2AP11388 RNU6-510P-201ENST00000391239 108 ntBASIC-7.33□□□□□ -3.58
TOP2AP11388 SNORA63.7-201ENST00000365579 123 ntBASIC-7.34□□□□□ -3.58
TOP2AP11388 Y_RNA.586-201ENST00000391146 98 ntBASIC-7.34□□□□□ -3.58
TOP2AP11388 RNU4-14P-201ENST00000410858 122 ntBASIC-7.34□□□□□ -3.58
TOP2AP11388 RNU6-1024P-201ENST00000384199 107 ntBASIC-7.35□□□□□ -3.59
TOP2AP11388 DNAJC19P2-201ENST00000593340 302 ntBASIC-7.35□□□□□ -3.59
TOP2AP11388 Y_RNA.496-201ENST00000384444 101 ntBASIC-7.36□□□□□ -3.59
TOP2AP11388 RNY3P15-201ENST00000516297 97 ntBASIC-7.36□□□□□ -3.59
TOP2AP11388 MIR1302-6-201ENST00000408466 90 ntBASIC-7.37□□□□□ -3.59
TOP2AP11388 Y_RNA.84-201ENST00000363011 104 ntBASIC-7.37□□□□□ -3.59
TOP2AP11388 MTATP8P2-201ENST00000435212 202 ntBASIC-7.37□□□□□ -3.59
TOP2AP11388 Y_RNA.292-201ENST00000364904 97 ntBASIC-7.38□□□□□ -3.59
TOP2AP11388 Y_RNA.661-201ENST00000516003 99 ntBASIC-7.38□□□□□ -3.59
TOP2AP11388 RNU6-460P-201ENST00000391158 108 ntBASIC-7.4□□□□□ -3.59
TOP2AP11388 U7.3-201ENST00000616123 62 ntBASIC-7.4□□□□□ -3.59
TOP2AP11388 RNU6-906P-201ENST00000384700 70 ntBASIC-7.41□□□□□ -3.6
TOP2AP11388 AC090425.1-201ENST00000610007 140 ntBASIC-7.41□□□□□ -3.6
TOP2AP11388 RNU6-1008P-201ENST00000384160 104 ntBASIC-7.42□□□□□ -3.6
TOP2AP11388 RNU7-121P-201ENST00000516604 62 ntBASIC-7.42□□□□□ -3.6
TOP2AP11388 SNORD58C-201ENST00000365223 64 ntBASIC-7.43□□□□□ -3.6
TOP2AP11388 RNU6-239P-201ENST00000390990 99 ntBASIC-7.43□□□□□ -3.6
TOP2AP11388 Y_RNA.387-201ENST00000383918 102 ntBASIC-7.45□□□□□ -3.6
TOP2AP11388 RNU6-904P-201ENST00000516206 101 ntBASIC-7.45□□□□□ -3.6
TOP2AP11388 RNU6-1061P-201ENST00000516530 99 ntBASIC-7.45□□□□□ -3.6
TOP2AP11388 MIR3938-201ENST00000582157 103 ntBASIC-7.45□□□□□ -3.6
TOP2AP11388 MIR548AL-201ENST00000578416 97 ntBASIC-7.46□□□□□ -3.6
TOP2AP11388 RNU6-1042P-201ENST00000384204 107 ntBASIC-7.47□□□□□ -3.61
TOP2AP11388 SNORA40.15-201ENST00000516884 107 ntBASIC-7.48□□□□□ -3.61
TOP2AP11388 U2.14-201ENST00000615943 113 ntBASIC-7.48□□□□□ -3.61
TOP2AP11388 SNORD58.1-201ENST00000391313 66 ntBASIC-7.49□□□□□ -3.61
TOP2AP11388 RNU7-197P-201ENST00000458836 62 ntBASIC-7.49□□□□□ -3.61
TOP2AP11388 RN7SKP298-201ENST00000515950 94 ntBASIC-7.49□□□□□ -3.61
TOP2AP11388 RNU6-70P-201ENST00000516438 60 ntBASIC-7.49□□□□□ -3.61
TOP2AP11388 AF246928.1-201ENST00000623768 87 ntBASIC-7.49□□□□□ -3.61
TOP2AP11388 Y_RNA.720-201ENST00000517166 92 ntBASIC-7.51□□□□□ -3.61
TOP2AP11388 MIR4668-201ENST00000582284 70 ntBASIC-7.51□□□□□ -3.61
TOP2AP11388 Y_RNA.19-201ENST00000362462 99 ntBASIC-7.52□□□□□ -3.61
TOP2AP11388 RNU6-940P-201ENST00000363433 104 ntBASIC-7.52□□□□□ -3.61
TOP2AP11388 RNU6-780P-201ENST00000391030 104 ntBASIC-7.52□□□□□ -3.61
TOP2AP11388 MIR1302-11-201ENST00000408051 138 ntBASIC-7.52□□□□□ -3.61
TOP2AP11388 MIR1302-9-201ENST00000408365 138 ntBASIC-7.52□□□□□ -3.61
TOP2AP11388 MIR1302-10-201ENST00000408734 138 ntBASIC-7.52□□□□□ -3.61
TOP2AP11388 MIR1302-2-201ENST00000607096 138 ntBASIC-7.52□□□□□ -3.61
TOP2AP11388 RNU6-1227P-201ENST00000383981 107 ntBASIC-7.54□□□□□ -3.62
TOP2AP11388 RNU6-411P-201ENST00000384451 107 ntBASIC-7.54□□□□□ -3.62
TOP2AP11388 MTND2P23-201ENST00000422990 651 ntBASIC-7.54□□□□□ -3.62
TOP2AP11388 RNU6-1204P-201ENST00000363948 107 ntBASIC-7.55□□□□□ -3.62
TOP2AP11388 Y_RNA.635-201ENST00000459041 101 ntBASIC-7.56□□□□□ -3.62
TOP2AP11388 AP001340.1-201ENST00000624405 217 ntBASIC-7.56□□□□□ -3.62
TOP2AP11388 MTND5P22-201ENST00000458380 195 ntBASIC-7.57□□□□□ -3.62
TOP2AP11388 MIR4643-201ENST00000577473 78 ntBASIC-7.57□□□□□ -3.62
TOP2AP11388 SNORA26.8-201ENST00000391306 124 ntBASIC-7.57□□□□□ -3.62
TOP2AP11388 MIR3915-201ENST00000578518 97 ntBASIC-7.57□□□□□ -3.62
TOP2AP11388 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-7.59□□□□□ -3.62
TOP2AP11388 MIR8062-201ENST00000621515 85 ntBASIC-7.59□□□□□ -3.62
TOP2AP11388 Y_RNA.26-201ENST00000362539 101 ntBASIC-7.61□□□□□ -3.63
TOP2AP11388 Y_RNA.620-201ENST00000411009 88 ntBASIC-7.61□□□□□ -3.63
TOP2AP11388 Y_RNA.252-201ENST00000364556 101 ntBASIC-7.62□□□□□ -3.63
TOP2AP11388 AL589823.1-201ENST00000429577 183 ntBASIC-7.62□□□□□ -3.63
TOP2AP11388 RNU6-808P-201ENST00000391233 108 ntBASIC-7.63□□□□□ -3.63
TOP2AP11388 RNU6-1143P-201ENST00000516125 104 ntBASIC-7.63□□□□□ -3.63
TOP2AP11388 MIR1252-201ENST00000408861 65 ntBASIC-7.64□□□□□ -3.63
TOP2AP11388 MIR548BB-201ENST00000626714 66 ntBASIC-7.64□□□□□ -3.63
TOP2AP11388 RNU7-125P-201ENST00000458760 62 ntBASIC-7.67□□□□□ -3.64
TOP2AP11388 RNU6-232P-201ENST00000517144 64 ntBASIC-7.68□□□□□ -3.64
TOP2AP11388 Y_RNA.107-201ENST00000363190 121 ntBASIC-7.68□□□□□ -3.64
TOP2AP11388 Y_RNA.632-201ENST00000459189 102 ntBASIC-7.68□□□□□ -3.64
TOP2AP11388 MTND4P17-201ENST00000470444 350 ntBASIC-7.68□□□□□ -3.64
TOP2AP11388 RNU6-620P-201ENST00000384017 96 ntBASIC-7.69□□□□□ -3.64
TOP2AP11388 Y_RNA.93-201ENST00000363066 109 ntBASIC-7.71□□□□□ -3.64
TOP2AP11388 MIR4509-3-201ENST00000578671 94 ntBASIC-7.71□□□□□ -3.64
TOP2AP11388 MIR4509-2-201ENST00000583920 94 ntBASIC-7.71□□□□□ -3.64
TOP2AP11388 MIR4509-1-201ENST00000618224 94 ntBASIC-7.71□□□□□ -3.64
TOP2AP11388 MIR494-201ENST00000349529 81 ntBASIC-7.72□□□□□ -3.64
TOP2AP11388 RNU6-255P-201ENST00000516957 105 ntBASIC-7.73□□□□□ -3.65
TOP2AP11388 SNORD116-22-201ENST00000384430 92 ntBASIC-7.73□□□□□ -3.65
TOP2AP11388 RNU6-823P-201ENST00000391042 103 ntBASIC-7.74□□□□□ -3.65
TOP2AP11388 Y_RNA.89-201ENST00000363031 102 ntBASIC-7.75□□□□□ -3.65
TOP2AP11388 RNU6-497P-201ENST00000365316 104 ntBASIC-7.75□□□□□ -3.65
TOP2AP11388 MIR590-201ENST00000385008 97 ntBASIC-7.75□□□□□ -3.65
TOP2AP11388 U7.2-201ENST00000607576 63 ntBASIC-7.75□□□□□ -3.65
TOP2AP11388 RNU6-797P-201ENST00000363101 109 ntBASIC-7.77□□□□□ -3.65
TOP2AP11388 Y_RNA.194-201ENST00000363985 102 ntBASIC-7.77□□□□□ -3.65
TOP2AP11388 RNU6-1107P-201ENST00000364817 104 ntBASIC-7.77□□□□□ -3.65
TOP2AP11388 RNU6-315P-201ENST00000362666 107 ntBASIC-7.78□□□□□ -3.65
TOP2AP11388 Y_RNA.290-201ENST00000364879 114 ntBASIC-7.78□□□□□ -3.65
TOP2AP11388 RNU6-918P-201ENST00000391219 106 ntBASIC-7.78□□□□□ -3.65
TOP2AP11388 Y_RNA.611-201ENST00000410682 108 ntBASIC-7.78□□□□□ -3.65
TOP2AP11388 AL157777.2-201ENST00000258070 137 ntBASIC-7.78□□□□□ -3.66
TOP2AP11388 RNU6-751P-201ENST00000516382 101 ntBASIC-7.8□□□□□ -3.66
TOP2AP11388 Y_RNA.626-201ENST00000411288 95 ntBASIC-7.81□□□□□ -3.66
TOP2AP11388 AC090582.1-201ENST00000636321 199 ntBASIC-7.81□□□□□ -3.66
TOP2AP11388 AC006160.2-201ENST00000637708 154 ntBASIC-7.81□□□□□ -3.66
TOP2AP11388 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-7.82□□□□□ -3.66
TOP2AP11388 RNU6-687P-201ENST00000516443 89 ntBASIC-7.82□□□□□ -3.66
TOP2AP11388 RNU7-30P-201ENST00000516835 62 ntBASIC-7.82□□□□□ -3.66
TOP2AP11388 RNU6-219P-201ENST00000364728 107 ntBASIC-7.83□□□□□ -3.66
TOP2AP11388 Y_RNA.459-201ENST00000384251 102 ntBASIC-7.83□□□□□ -3.66
TOP2AP11388 Y_RNA.276-201ENST00000364732 109 ntBASIC-7.84□□□□□ -3.66
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms