Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC023932.2-201ENST00000603176 175 ntBASIC0.46□□□□□ -2.34
CSB-PGBD3P0DP91 MIR6854-201ENST00000614935 69 ntBASIC0.46□□□□□ -2.34
CSB-PGBD3P0DP91 MIR124-2-201ENST00000385081 109 ntBASIC0.45□□□□□ -2.34
CSB-PGBD3P0DP91 AC114755.3-201ENST00000481111 251 ntBASIC0.45□□□□□ -2.34
CSB-PGBD3P0DP91 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.45□□□□□ -2.34
CSB-PGBD3P0DP91 Y_RNA.433-201ENST00000384089 102 ntBASIC0.44□□□□□ -2.34
CSB-PGBD3P0DP91 RNA5SP63-201ENST00000391225 112 ntBASIC0.44□□□□□ -2.34
CSB-PGBD3P0DP91 RNU6-732P-201ENST00000516033 103 ntBASIC0.44□□□□□ -2.34
CSB-PGBD3P0DP91 RNU6-1238P-201ENST00000517215 102 ntBASIC0.44□□□□□ -2.34
CSB-PGBD3P0DP91 SNORD63.2-201ENST00000516303 64 ntBASIC0.43□□□□□ -2.34
CSB-PGBD3P0DP91 AC104408.1-201ENST00000605241 170 ntBASIC0.43□□□□□ -2.34
CSB-PGBD3P0DP91 MIR4315-1-201ENST00000636800 73 ntBASIC0.43□□□□□ -2.34
CSB-PGBD3P0DP91 MIR4315-2-201ENST00000640925 73 ntBASIC0.43□□□□□ -2.34
CSB-PGBD3P0DP91 RNU6-986P-201ENST00000363133 102 ntBASIC0.42□□□□□ -2.34
CSB-PGBD3P0DP91 SNORA42.1-201ENST00000363515 137 ntBASIC0.42□□□□□ -2.34
CSB-PGBD3P0DP91 MIR892B-201ENST00000401279 77 ntBASIC0.42□□□□□ -2.34
CSB-PGBD3P0DP91 MIR548AL-201ENST00000578416 97 ntBASIC0.42□□□□□ -2.34
CSB-PGBD3P0DP91 RNU6-901P-201ENST00000384593 106 ntBASIC0.41□□□□□ -2.34
CSB-PGBD3P0DP91 MIR145-201ENST00000384967 88 ntBASIC0.41□□□□□ -2.34
CSB-PGBD3P0DP91 MIR610-201ENST00000385139 96 ntBASIC0.4□□□□□ -2.35
CSB-PGBD3P0DP91 MIR655-201ENST00000362159 97 ntBASIC0.39□□□□□ -2.35
CSB-PGBD3P0DP91 SNORD19-201ENST00000391191 68 ntBASIC0.39□□□□□ -2.35
CSB-PGBD3P0DP91 RNU7-165P-201ENST00000458864 60 ntBASIC0.39□□□□□ -2.35
CSB-PGBD3P0DP91 MIR520D-201ENST00000385002 87 ntBASIC0.37□□□□□ -2.35
CSB-PGBD3P0DP91 MIR29B1-201ENST00000385015 81 ntBASIC0.37□□□□□ -2.35
CSB-PGBD3P0DP91 RNU6-258P-201ENST00000390884 101 ntBASIC0.37□□□□□ -2.35
CSB-PGBD3P0DP91 AL445193.1-201ENST00000441183 141 ntBASIC0.37□□□□□ -2.35
CSB-PGBD3P0DP91 RNA5SP214-201ENST00000363378 118 ntBASIC0.36□□□□□ -2.35
CSB-PGBD3P0DP91 RNU7-159P-201ENST00000459284 62 ntBASIC0.36□□□□□ -2.35
CSB-PGBD3P0DP91 MIR4280-201ENST00000582178 76 ntBASIC0.36□□□□□ -2.35
CSB-PGBD3P0DP91 RNU6-1111P-201ENST00000391118 107 ntBASIC0.35□□□□□ -2.35
CSB-PGBD3P0DP91 MIR548Q-201ENST00000408404 100 ntBASIC0.35□□□□□ -2.35
CSB-PGBD3P0DP91 MIR6718-201ENST00000616153 80 ntBASIC0.35□□□□□ -2.35
CSB-PGBD3P0DP91 SNORD114-5-201ENST00000362928 70 ntBASIC0.34□□□□□ -2.36
CSB-PGBD3P0DP91 MIR4743-201ENST00000584576 69 ntBASIC0.34□□□□□ -2.36
CSB-PGBD3P0DP91 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.34□□□□□ -2.36
CSB-PGBD3P0DP91 SNORD114-9-201ENST00000364370 72 ntBASIC0.32□□□□□ -2.36
CSB-PGBD3P0DP91 AP002795.1-201ENST00000534879 84 ntBASIC0.32□□□□□ -2.36
CSB-PGBD3P0DP91 RNU6-1233P-201ENST00000362922 102 ntBASIC0.31□□□□□ -2.36
CSB-PGBD3P0DP91 SNORD45.2-201ENST00000363552 72 ntBASIC0.31□□□□□ -2.36
CSB-PGBD3P0DP91 RNU6-742P-201ENST00000365289 107 ntBASIC0.3□□□□□ -2.36
CSB-PGBD3P0DP91 RNU6-530P-201ENST00000391180 107 ntBASIC0.3□□□□□ -2.36
CSB-PGBD3P0DP91 SNORD38.3-201ENST00000516599 73 ntBASIC0.3□□□□□ -2.36
CSB-PGBD3P0DP91 RNA5SP285-201ENST00000516619 119 ntBASIC0.3□□□□□ -2.36
CSB-PGBD3P0DP91 RNU6-929P-201ENST00000384429 107 ntBASIC0.29□□□□□ -2.36
CSB-PGBD3P0DP91 Y_RNA.321-201ENST00000365149 102 ntBASIC0.27□□□□□ -2.37
CSB-PGBD3P0DP91 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
CSB-PGBD3P0DP91 MIR6851-201ENST00000617060 67 ntBASIC0.26□□□□□ -2.37
CSB-PGBD3P0DP91 RNU6-1204P-201ENST00000363948 107 ntBASIC0.25□□□□□ -2.37
CSB-PGBD3P0DP91 SNORD49B-201ENST00000365172 72 ntBASIC0.25□□□□□ -2.37
CSB-PGBD3P0DP91 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.24□□□□□ -2.37
CSB-PGBD3P0DP91 MIR1468-201ENST00000410600 86 ntBASIC0.24□□□□□ -2.37
CSB-PGBD3P0DP91 RNU6-1008P-201ENST00000384160 104 ntBASIC0.23□□□□□ -2.37
CSB-PGBD3P0DP91 RNA5SP476-201ENST00000516613 103 ntBASIC0.23□□□□□ -2.37
CSB-PGBD3P0DP91 RNU6-1250P-201ENST00000391218 107 ntBASIC0.22□□□□□ -2.37
CSB-PGBD3P0DP91 SNORD18.2-201ENST00000459604 70 ntBASIC0.22□□□□□ -2.37
CSB-PGBD3P0DP91 Y_RNA.699-201ENST00000516803 93 ntBASIC0.22□□□□□ -2.37
CSB-PGBD3P0DP91 MIR5190-201ENST00000581537 80 ntBASIC0.22□□□□□ -2.37
CSB-PGBD3P0DP91 RNU6-46P-201ENST00000383860 107 ntBASIC0.21□□□□□ -2.38
CSB-PGBD3P0DP91 MIR548H4-201ENST00000408689 111 ntBASIC0.21□□□□□ -2.38
CSB-PGBD3P0DP91 RNU6-721P-201ENST00000410155 105 ntBASIC0.2□□□□□ -2.38
CSB-PGBD3P0DP91 AL590491.3-201ENST00000610731 82 ntBASIC0.2□□□□□ -2.38
CSB-PGBD3P0DP91 SNORA27.2-201ENST00000363365 126 ntBASIC0.19□□□□□ -2.38
CSB-PGBD3P0DP91 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
CSB-PGBD3P0DP91 SNORA26.4-201ENST00000391188 123 ntBASIC0.18□□□□□ -2.38
CSB-PGBD3P0DP91 MIR1295A-201ENST00000408463 79 ntBASIC0.18□□□□□ -2.38
CSB-PGBD3P0DP91 MIR5683-201ENST00000636514 76 ntBASIC0.18□□□□□ -2.38
CSB-PGBD3P0DP91 RNU6-608P-201ENST00000383927 104 ntBASIC0.17□□□□□ -2.38
CSB-PGBD3P0DP91 SNORD22.1-201ENST00000516331 125 ntBASIC0.17□□□□□ -2.38
CSB-PGBD3P0DP91 RNA5SP66-201ENST00000517178 101 ntBASIC0.17□□□□□ -2.38
CSB-PGBD3P0DP91 MIR6759-201ENST00000638110 65 ntBASIC0.17□□□□□ -2.38
CSB-PGBD3P0DP91 RNU6-822P-201ENST00000362707 106 ntBASIC0.16□□□□□ -2.38
CSB-PGBD3P0DP91 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.16□□□□□ -2.38
CSB-PGBD3P0DP91 AL353691.2-201ENST00000443795 59 ntBASIC0.15□□□□□ -2.39
CSB-PGBD3P0DP91 SNORD74.6-201ENST00000364796 70 ntBASIC0.14□□□□□ -2.39
CSB-PGBD3P0DP91 MIR518B-201ENST00000385127 83 ntBASIC0.14□□□□□ -2.39
CSB-PGBD3P0DP91 MIR4290-201ENST00000583807 95 ntBASIC0.13□□□□□ -2.39
CSB-PGBD3P0DP91 SNORD115-33-201ENST00000363723 82 ntBASIC0.12□□□□□ -2.39
CSB-PGBD3P0DP91 AC093726.3-201ENST00000637588 150 ntBASIC0.12□□□□□ -2.39
CSB-PGBD3P0DP91 MIR4426-201ENST00000640330 63 ntBASIC0.12□□□□□ -2.39
CSB-PGBD3P0DP91 RNY3P8-201ENST00000411366 126 ntBASIC0.11□□□□□ -2.39
CSB-PGBD3P0DP91 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.1□□□□□ -2.39
CSB-PGBD3P0DP91 RNA5SP169-201ENST00000517268 117 ntBASIC0.1□□□□□ -2.39
CSB-PGBD3P0DP91 RNU6-724P-201ENST00000390958 105 ntBASIC0.09□□□□□ -2.4
CSB-PGBD3P0DP91 HAR1A.1-201ENST00000459583 118 ntBASIC0.09□□□□□ -2.4
CSB-PGBD3P0DP91 MIR4768-201ENST00000585270 74 ntBASIC0.09□□□□□ -2.4
CSB-PGBD3P0DP91 SNORD114-17-201ENST00000364699 75 ntBASIC0.08□□□□□ -2.4
CSB-PGBD3P0DP91 SNORD114-12-201ENST00000365400 75 ntBASIC0.08□□□□□ -2.4
CSB-PGBD3P0DP91 RNU6-59P-201ENST00000384787 107 ntBASIC0.08□□□□□ -2.4
CSB-PGBD3P0DP91 SNORD75.1-201ENST00000408373 60 ntBASIC0.08□□□□□ -2.4
CSB-PGBD3P0DP91 MIR6086-201ENST00000638065 55 ntBASIC0.08□□□□□ -2.4
CSB-PGBD3P0DP91 MIR202-201ENST00000362219 110 ntBASIC0.07□□□□□ -2.4
CSB-PGBD3P0DP91 AP000533.3-201ENST00000447704 118 ntBASIC0.07□□□□□ -2.4
CSB-PGBD3P0DP91 MIR4636-201ENST00000582271 80 ntBASIC0.07□□□□□ -2.4
CSB-PGBD3P0DP91 RPL35AP4-201ENST00000412007 102 ntBASIC0.05□□□□□ -2.4
CSB-PGBD3P0DP91 MIR3179-1-201ENST00000578940 84 ntBASIC0.05□□□□□ -2.4
CSB-PGBD3P0DP91 MIR3179-2-201ENST00000579107 84 ntBASIC0.05□□□□□ -2.4
CSB-PGBD3P0DP91 MIR3179-3-201ENST00000579566 84 ntBASIC0.05□□□□□ -2.4
CSB-PGBD3P0DP91 MIR3179-4-201ENST00000617599 84 ntBASIC0.05□□□□□ -2.4
CSB-PGBD3P0DP91 RNU6-361P-201ENST00000364454 107 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms