Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MIR3675-201ENST00000583661 73 ntBASIC-1.55□□□□□ -2.66
VIMP08670 MIR664B-201ENST00000626756 61 ntBASIC-1.55□□□□□ -2.66
VIMP08670 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.56□□□□□ -2.66
VIMP08670 MIR1207-201ENST00000408249 87 ntBASIC-1.56□□□□□ -2.66
VIMP08670 RNU7-174P-201ENST00000516248 59 ntBASIC-1.56□□□□□ -2.66
VIMP08670 MIR23C-201ENST00000579846 100 ntBASIC-1.56□□□□□ -2.66
VIMP08670 RNU6-119P-201ENST00000364882 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 MIR488-201ENST00000365739 83 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-32P-201ENST00000383948 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-13P-201ENST00000384248 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-12P-201ENST00000384604 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-41P-201ENST00000384741 107 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-630P-201ENST00000391258 106 ntBASIC-1.57□□□□□ -2.66
VIMP08670 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.57□□□□□ -2.66
VIMP08670 RNU6-79P-201ENST00000362511 107 ntBASIC-1.58□□□□□ -2.66
VIMP08670 SNORA63.4-201ENST00000362763 126 ntBASIC-1.58□□□□□ -2.66
VIMP08670 RNU6-686P-201ENST00000364839 107 ntBASIC-1.58□□□□□ -2.66
VIMP08670 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.58□□□□□ -2.66
VIMP08670 AL606753.1-201ENST00000427435 87 ntBASIC-1.58□□□□□ -2.66
VIMP08670 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.58□□□□□ -2.66
VIMP08670 SNORD45.1-201ENST00000363181 77 ntBASIC-1.59□□□□□ -2.66
VIMP08670 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.59□□□□□ -2.66
VIMP08670 MIR496-201ENST00000385226 102 ntBASIC-1.59□□□□□ -2.66
VIMP08670 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.6□□□□□ -2.67
VIMP08670 RNU6-640P-201ENST00000363693 105 ntBASIC-1.6□□□□□ -2.67
VIMP08670 RNU6-608P-201ENST00000383927 104 ntBASIC-1.6□□□□□ -2.67
VIMP08670 RNU6-587P-201ENST00000391282 106 ntBASIC-1.6□□□□□ -2.67
VIMP08670 MIR4484-201ENST00000582855 83 ntBASIC-1.6□□□□□ -2.67
VIMP08670 MIR548V-201ENST00000584165 80 ntBASIC-1.6□□□□□ -2.67
VIMP08670 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.61□□□□□ -2.67
VIMP08670 RNU6-698P-201ENST00000363523 107 ntBASIC-1.61□□□□□ -2.67
VIMP08670 RNU6-34P-201ENST00000364874 107 ntBASIC-1.61□□□□□ -2.67
VIMP08670 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.61□□□□□ -2.67
VIMP08670 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.61□□□□□ -2.67
VIMP08670 MIR4723-201ENST00000585070 81 ntBASIC-1.61□□□□□ -2.67
VIMP08670 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.62□□□□□ -2.67
VIMP08670 RNU6-147P-201ENST00000383983 107 ntBASIC-1.62□□□□□ -2.67
VIMP08670 RNU6-129P-201ENST00000391022 107 ntBASIC-1.62□□□□□ -2.67
VIMP08670 AC074348.1-201ENST00000426503 132 ntBASIC-1.62□□□□□ -2.67
VIMP08670 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.62□□□□□ -2.67
VIMP08670 RNU6-980P-201ENST00000516925 103 ntBASIC-1.62□□□□□ -2.67
VIMP08670 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.63□□□□□ -2.67
VIMP08670 RNU6-598P-201ENST00000364017 105 ntBASIC-1.63□□□□□ -2.67
VIMP08670 U4.4-201ENST00000620626 117 ntBASIC-1.63□□□□□ -2.67
VIMP08670 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.64□□□□□ -2.67
VIMP08670 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.64□□□□□ -2.67
VIMP08670 MIR3139-201ENST00000579145 76 ntBASIC-1.64□□□□□ -2.67
VIMP08670 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.65□□□□□ -2.67
VIMP08670 RNU6-675P-201ENST00000384236 104 ntBASIC-1.65□□□□□ -2.67
VIMP08670 MIR520D-201ENST00000385002 87 ntBASIC-1.65□□□□□ -2.67
VIMP08670 MTND4LP1-201ENST00000446263 157 ntBASIC-1.65□□□□□ -2.67
VIMP08670 RNU6-844P-201ENST00000517175 102 ntBASIC-1.65□□□□□ -2.67
VIMP08670 U2.18-201ENST00000622185 84 ntBASIC-1.65□□□□□ -2.67
VIMP08670 RNU6-215P-201ENST00000365169 102 ntBASIC-1.66□□□□□ -2.68
VIMP08670 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.66□□□□□ -2.68
VIMP08670 SNORD20-201ENST00000384550 80 ntBASIC-1.66□□□□□ -2.68
VIMP08670 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.66□□□□□ -2.68
VIMP08670 RNU6-919P-201ENST00000516731 104 ntBASIC-1.66□□□□□ -2.68
VIMP08670 AC006160.2-201ENST00000637708 154 ntBASIC-1.66□□□□□ -2.68
VIMP08670 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.66□□□□□ -2.68
VIMP08670 RNA5SP405-201ENST00000363059 114 ntBASIC-1.67□□□□□ -2.68
VIMP08670 MIR630-201ENST00000384957 97 ntBASIC-1.67□□□□□ -2.68
VIMP08670 RNU6-695P-201ENST00000391157 104 ntBASIC-1.67□□□□□ -2.68
VIMP08670 AL603908.1-201ENST00000406098 201 ntBASIC-1.67□□□□□ -2.68
VIMP08670 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.69□□□□□ -2.68
VIMP08670 MIR548AA1-201ENST00000384971 97 ntBASIC-1.69□□□□□ -2.68
VIMP08670 MT-TM-201ENST00000387377 68 ntBASIC-1.69□□□□□ -2.68
VIMP08670 MIR3170-201ENST00000582699 77 ntBASIC-1.69□□□□□ -2.68
VIMP08670 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.69□□□□□ -2.68
VIMP08670 RNU6-247P-201ENST00000362636 107 ntBASIC-1.7□□□□□ -2.68
VIMP08670 RNA5SP215-201ENST00000363440 122 ntBASIC-1.7□□□□□ -2.68
VIMP08670 RNU6-194P-201ENST00000363862 105 ntBASIC-1.7□□□□□ -2.68
VIMP08670 RNA5SP173-201ENST00000364857 136 ntBASIC-1.7□□□□□ -2.68
VIMP08670 SNORD113-2-201ENST00000391082 72 ntBASIC-1.7□□□□□ -2.68
VIMP08670 AC120024.2-201ENST00000576526 175 ntBASIC-1.7□□□□□ -2.68
VIMP08670 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.71□□□□□ -2.68
VIMP08670 RNU6-668P-201ENST00000364180 107 ntBASIC-1.71□□□□□ -2.68
VIMP08670 SNORD54-201ENST00000459159 67 ntBASIC-1.71□□□□□ -2.68
VIMP08670 MIR1297-201ENST00000637311 77 ntBASIC-1.71□□□□□ -2.68
VIMP08670 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.72□□□□□ -2.68
VIMP08670 SNORD116-16-201ENST00000384533 92 ntBASIC-1.72□□□□□ -2.68
VIMP08670 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
VIMP08670 RNU6-380P-201ENST00000410207 107 ntBASIC-1.72□□□□□ -2.68
VIMP08670 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.72□□□□□ -2.68
VIMP08670 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.72□□□□□ -2.68
VIMP08670 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.72□□□□□ -2.68
VIMP08670 MIR664A-201ENST00000626086 82 ntBASIC-1.72□□□□□ -2.68
VIMP08670 MIR8053-201ENST00000613344 75 ntBASIC-1.73□□□□□ -2.69
VIMP08670 SNORD45A-201ENST00000384512 84 ntBASIC-1.74□□□□□ -2.69
VIMP08670 RNU6-995P-201ENST00000391244 107 ntBASIC-1.74□□□□□ -2.69
VIMP08670 RNU6-789P-201ENST00000517105 102 ntBASIC-1.74□□□□□ -2.69
VIMP08670 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.74□□□□□ -2.69
VIMP08670 SNORD113.1-201ENST00000363280 73 ntBASIC-1.75□□□□□ -2.69
VIMP08670 RNU6-841P-201ENST00000383872 107 ntBASIC-1.75□□□□□ -2.69
VIMP08670 RNU6-563P-201ENST00000364872 108 ntBASIC-1.76□□□□□ -2.69
VIMP08670 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.76□□□□□ -2.69
VIMP08670 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.76□□□□□ -2.69
VIMP08670 MIR3123-201ENST00000583417 75 ntBASIC-1.76□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 401.2 ms