Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 RNU6-724P-201ENST00000390958 105 ntBASIC0.52□□□□□ -2.33
KRT1P04264 RNA5SP67-201ENST00000516422 131 ntBASIC0.52□□□□□ -2.33
KRT1P04264 CR383656.4-201ENST00000546909 122 ntBASIC0.52□□□□□ -2.33
KRT1P04264 MIR6514-201ENST00000622549 70 ntBASIC0.52□□□□□ -2.33
KRT1P04264 Y_RNA.457-201ENST00000384237 111 ntBASIC0.51□□□□□ -2.33
KRT1P04264 RNU6-455P-201ENST00000384681 107 ntBASIC0.51□□□□□ -2.33
KRT1P04264 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.51□□□□□ -2.33
KRT1P04264 RNU6-530P-201ENST00000391180 107 ntBASIC0.5□□□□□ -2.33
KRT1P04264 RNU6-732P-201ENST00000516033 103 ntBASIC0.5□□□□□ -2.33
KRT1P04264 RNU6-1238P-201ENST00000517215 102 ntBASIC0.5□□□□□ -2.33
KRT1P04264 MIR5589-201ENST00000579442 60 ntBASIC0.5□□□□□ -2.33
KRT1P04264 MIR6854-201ENST00000614935 69 ntBASIC0.5□□□□□ -2.33
KRT1P04264 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
KRT1P04264 RNA5SP368-201ENST00000364298 116 ntBASIC0.49□□□□□ -2.33
KRT1P04264 MIR4802-201ENST00000581881 80 ntBASIC0.49□□□□□ -2.33
KRT1P04264 MIR148A-201ENST00000362215 68 ntBASIC0.48□□□□□ -2.33
KRT1P04264 MIR892B-201ENST00000401279 77 ntBASIC0.48□□□□□ -2.33
KRT1P04264 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
KRT1P04264 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
KRT1P04264 RNU6-180P-201ENST00000516697 61 ntBASIC0.48□□□□□ -2.33
KRT1P04264 IGLVI-20-201ENST00000519296 130 ntBASIC0.48□□□□□ -2.33
KRT1P04264 U6.103-201ENST00000637085 61 ntBASIC0.48□□□□□ -2.33
KRT1P04264 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
KRT1P04264 RNU6-815P-201ENST00000384080 113 ntBASIC0.47□□□□□ -2.33
KRT1P04264 MIR643-201ENST00000385267 97 ntBASIC0.47□□□□□ -2.33
KRT1P04264 MIR548Q-201ENST00000408404 100 ntBASIC0.47□□□□□ -2.33
KRT1P04264 RNU6-901P-201ENST00000384593 106 ntBASIC0.46□□□□□ -2.34
KRT1P04264 RNA5SP163-201ENST00000410304 99 ntBASIC0.46□□□□□ -2.34
KRT1P04264 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
KRT1P04264 MIR5704-201ENST00000584029 77 ntBASIC0.46□□□□□ -2.34
KRT1P04264 MIR6507-201ENST00000613630 70 ntBASIC0.46□□□□□ -2.34
KRT1P04264 MIR6759-201ENST00000638110 65 ntBASIC0.46□□□□□ -2.34
KRT1P04264 MIR124-2-201ENST00000385081 109 ntBASIC0.45□□□□□ -2.34
KRT1P04264 RNA5SP25-201ENST00000410815 110 ntBASIC0.45□□□□□ -2.34
KRT1P04264 Y_RNA.699-201ENST00000516803 93 ntBASIC0.45□□□□□ -2.34
KRT1P04264 AC069113.3-201ENST00000521019 150 ntBASIC0.45□□□□□ -2.34
KRT1P04264 RNU6-1233P-201ENST00000362922 102 ntBASIC0.44□□□□□ -2.34
KRT1P04264 SNORA27.2-201ENST00000363365 126 ntBASIC0.44□□□□□ -2.34
KRT1P04264 SNORA42.1-201ENST00000363515 137 ntBASIC0.44□□□□□ -2.34
KRT1P04264 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
KRT1P04264 SNORD114-15-201ENST00000364687 72 ntBASIC0.43□□□□□ -2.34
KRT1P04264 Z95118.1-201ENST00000421372 247 ntBASIC0.43□□□□□ -2.34
KRT1P04264 SNORA62.5-201ENST00000516634 120 ntBASIC0.43□□□□□ -2.34
KRT1P04264 MIR8068-201ENST00000618032 68 ntBASIC0.43□□□□□ -2.34
KRT1P04264 U4.2-201ENST00000618561 85 ntBASIC0.43□□□□□ -2.34
KRT1P04264 AC090625.1-201ENST00000357130 210 ntBASIC0.42□□□□□ -2.34
KRT1P04264 RNA5SP63-201ENST00000391225 112 ntBASIC0.42□□□□□ -2.34
KRT1P04264 SNX3P1X-201ENST00000414887 175 ntBASIC0.42□□□□□ -2.34
KRT1P04264 RNU6-758P-201ENST00000516292 89 ntBASIC0.42□□□□□ -2.34
KRT1P04264 MIR4317-201ENST00000637586 65 ntBASIC0.42□□□□□ -2.34
KRT1P04264 Y_RNA.185-201ENST00000363894 100 ntBASIC0.41□□□□□ -2.34
KRT1P04264 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
KRT1P04264 RNU6-59P-201ENST00000384787 107 ntBASIC0.41□□□□□ -2.34
KRT1P04264 MIR548H4-201ENST00000408689 111 ntBASIC0.41□□□□□ -2.34
KRT1P04264 RNA5SP134-201ENST00000516492 96 ntBASIC0.41□□□□□ -2.34
KRT1P04264 MIR4514-201ENST00000581410 57 ntBASIC0.41□□□□□ -2.34
KRT1P04264 MIR4743-201ENST00000584576 69 ntBASIC0.41□□□□□ -2.34
KRT1P04264 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
KRT1P04264 RNU6-1008P-201ENST00000384160 104 ntBASIC0.4□□□□□ -2.35
KRT1P04264 MIR610-201ENST00000385139 96 ntBASIC0.4□□□□□ -2.35
KRT1P04264 SNORD19-201ENST00000391191 68 ntBASIC0.4□□□□□ -2.35
KRT1P04264 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.4□□□□□ -2.35
KRT1P04264 MIR548H2-201ENST00000408874 88 ntBASIC0.4□□□□□ -2.35
KRT1P04264 SNORD56B-201ENST00000384713 71 ntBASIC0.39□□□□□ -2.35
KRT1P04264 AC114755.3-201ENST00000481111 251 ntBASIC0.39□□□□□ -2.35
KRT1P04264 RNU6-1327P-201ENST00000365302 105 ntBASIC0.38□□□□□ -2.35
KRT1P04264 RNU6-258P-201ENST00000390884 101 ntBASIC0.38□□□□□ -2.35
KRT1P04264 MIR1207-201ENST00000408249 87 ntBASIC0.38□□□□□ -2.35
KRT1P04264 AC023932.2-201ENST00000603176 175 ntBASIC0.38□□□□□ -2.35
KRT1P04264 MIR4315-1-201ENST00000636800 73 ntBASIC0.38□□□□□ -2.35
KRT1P04264 MIR4315-2-201ENST00000640925 73 ntBASIC0.38□□□□□ -2.35
KRT1P04264 MIR520D-201ENST00000385002 87 ntBASIC0.37□□□□□ -2.35
KRT1P04264 RNA5SP169-201ENST00000517268 117 ntBASIC0.37□□□□□ -2.35
KRT1P04264 RNU6-1326P-201ENST00000391262 107 ntBASIC0.36□□□□□ -2.35
KRT1P04264 AC244250.2-201ENST00000418731 148 ntBASIC0.36□□□□□ -2.35
KRT1P04264 MIR4426-201ENST00000640330 63 ntBASIC0.36□□□□□ -2.35
KRT1P04264 RNU6-1047P-201ENST00000364418 107 ntBASIC0.35□□□□□ -2.35
KRT1P04264 MIR593-201ENST00000384856 100 ntBASIC0.35□□□□□ -2.35
KRT1P04264 RNU7-165P-201ENST00000458864 60 ntBASIC0.35□□□□□ -2.35
KRT1P04264 RNU7-159P-201ENST00000459284 62 ntBASIC0.35□□□□□ -2.35
KRT1P04264 RNY1P9-201ENST00000532431 109 ntBASIC0.35□□□□□ -2.35
KRT1P04264 RNU6-361P-201ENST00000364454 107 ntBASIC0.34□□□□□ -2.36
KRT1P04264 SNORD74.6-201ENST00000364796 70 ntBASIC0.34□□□□□ -2.36
KRT1P04264 MIR601-201ENST00000385256 79 ntBASIC0.34□□□□□ -2.36
KRT1P04264 AL445193.1-201ENST00000441183 141 ntBASIC0.33□□□□□ -2.36
KRT1P04264 MIR4280-201ENST00000582178 76 ntBASIC0.33□□□□□ -2.36
KRT1P04264 Y_RNA.345-201ENST00000365384 92 ntBASIC0.32□□□□□ -2.36
KRT1P04264 Y_RNA.413-201ENST00000384007 102 ntBASIC0.32□□□□□ -2.36
KRT1P04264 Y_RNA.468-201ENST00000384298 102 ntBASIC0.32□□□□□ -2.36
KRT1P04264 MIR604-201ENST00000384880 94 ntBASIC0.32□□□□□ -2.36
KRT1P04264 SNORA26.4-201ENST00000391188 123 ntBASIC0.32□□□□□ -2.36
KRT1P04264 AL353691.2-201ENST00000443795 59 ntBASIC0.32□□□□□ -2.36
KRT1P04264 SNORD18.2-201ENST00000459604 70 ntBASIC0.32□□□□□ -2.36
KRT1P04264 Y_RNA.754-201ENST00000476024 102 ntBASIC0.32□□□□□ -2.36
KRT1P04264 Y_RNA.790-201ENST00000614282 102 ntBASIC0.32□□□□□ -2.36
KRT1P04264 Y_RNA.782-201ENST00000614695 102 ntBASIC0.32□□□□□ -2.36
KRT1P04264 MIR5683-201ENST00000636514 76 ntBASIC0.32□□□□□ -2.36
KRT1P04264 MIR655-201ENST00000362159 97 ntBASIC0.31□□□□□ -2.36
KRT1P04264 MIR145-201ENST00000384967 88 ntBASIC0.31□□□□□ -2.36
KRT1P04264 SNORD115-33-201ENST00000363723 82 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms