Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.36□□□□□ -2.63
CD74P04233 RNU6-587P-201ENST00000391282 106 ntBASIC-1.36□□□□□ -2.63
CD74P04233 AC018880.2-201ENST00000414265 201 ntBASIC-1.36□□□□□ -2.63
CD74P04233 RNU6-32P-201ENST00000383948 107 ntBASIC-1.37□□□□□ -2.63
CD74P04233 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.37□□□□□ -2.63
CD74P04233 RNU6-13P-201ENST00000384248 107 ntBASIC-1.37□□□□□ -2.63
CD74P04233 RNU6-12P-201ENST00000384604 107 ntBASIC-1.37□□□□□ -2.63
CD74P04233 RNU6-41P-201ENST00000384741 107 ntBASIC-1.37□□□□□ -2.63
CD74P04233 RNU6-696P-201ENST00000390834 107 ntBASIC-1.37□□□□□ -2.63
CD74P04233 MIR548H1-201ENST00000408610 102 ntBASIC-1.37□□□□□ -2.63
CD74P04233 RNU6-983P-201ENST00000516004 103 ntBASIC-1.37□□□□□ -2.63
CD74P04233 RNU6-540P-201ENST00000384622 101 ntBASIC-1.38□□□□□ -2.63
CD74P04233 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
CD74P04233 RNU6-258P-201ENST00000390884 101 ntBASIC-1.38□□□□□ -2.63
CD74P04233 AC006160.2-201ENST00000637708 154 ntBASIC-1.38□□□□□ -2.63
CD74P04233 MIR429-201ENST00000362106 83 ntBASIC-1.39□□□□□ -2.63
CD74P04233 RNU6-640P-201ENST00000363693 105 ntBASIC-1.39□□□□□ -2.63
CD74P04233 RNU6-755P-201ENST00000364400 103 ntBASIC-1.39□□□□□ -2.63
CD74P04233 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.39□□□□□ -2.63
CD74P04233 RNU6-380P-201ENST00000410207 107 ntBASIC-1.39□□□□□ -2.63
CD74P04233 MTND4LP1-201ENST00000446263 157 ntBASIC-1.39□□□□□ -2.63
CD74P04233 RNU6-844P-201ENST00000517175 102 ntBASIC-1.39□□□□□ -2.63
CD74P04233 RNU6-698P-201ENST00000363523 107 ntBASIC-1.4□□□□□ -2.63
CD74P04233 SNORD18.1-201ENST00000363807 70 ntBASIC-1.4□□□□□ -2.63
CD74P04233 RNU6-34P-201ENST00000364874 107 ntBASIC-1.4□□□□□ -2.63
CD74P04233 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.4□□□□□ -2.63
CD74P04233 MIR1297-201ENST00000637311 77 ntBASIC-1.4□□□□□ -2.63
CD74P04233 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.41□□□□□ -2.64
CD74P04233 RNU6-147P-201ENST00000383983 107 ntBASIC-1.41□□□□□ -2.64
CD74P04233 RNU6-675P-201ENST00000384236 104 ntBASIC-1.41□□□□□ -2.64
CD74P04233 MIR630-201ENST00000384957 97 ntBASIC-1.41□□□□□ -2.64
CD74P04233 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.42□□□□□ -2.64
CD74P04233 RNU6-668P-201ENST00000364180 107 ntBASIC-1.42□□□□□ -2.64
CD74P04233 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.42□□□□□ -2.64
CD74P04233 RNU6-400P-201ENST00000391173 106 ntBASIC-1.42□□□□□ -2.64
CD74P04233 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.42□□□□□ -2.64
CD74P04233 AL606753.1-201ENST00000427435 87 ntBASIC-1.42□□□□□ -2.64
CD74P04233 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.42□□□□□ -2.64
CD74P04233 AC120024.2-201ENST00000576526 175 ntBASIC-1.42□□□□□ -2.64
CD74P04233 RNU6-228P-201ENST00000362700 106 ntBASIC-1.43□□□□□ -2.64
CD74P04233 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.43□□□□□ -2.64
CD74P04233 MIR3170-201ENST00000582699 77 ntBASIC-1.43□□□□□ -2.64
CD74P04233 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.44□□□□□ -2.64
CD74P04233 IGLL4P-201ENST00000614590 133 ntBASIC-1.44□□□□□ -2.64
CD74P04233 MIR664A-201ENST00000626086 82 ntBASIC-1.44□□□□□ -2.64
CD74P04233 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.45□□□□□ -2.64
CD74P04233 SNORD113.1-201ENST00000363280 73 ntBASIC-1.45□□□□□ -2.64
CD74P04233 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.45□□□□□ -2.64
CD74P04233 SNORD45A-201ENST00000384512 84 ntBASIC-1.45□□□□□ -2.64
CD74P04233 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.45□□□□□ -2.64
CD74P04233 SNORD113-2-201ENST00000391082 72 ntBASIC-1.45□□□□□ -2.64
CD74P04233 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.45□□□□□ -2.64
CD74P04233 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.45□□□□□ -2.64
CD74P04233 MIR8053-201ENST00000613344 75 ntBASIC-1.45□□□□□ -2.64
CD74P04233 SNORD20-201ENST00000384550 80 ntBASIC-1.46□□□□□ -2.64
CD74P04233 SNORA41B-201ENST00000384785 128 ntBASIC-1.46□□□□□ -2.64
CD74P04233 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.47□□□□□ -2.64
CD74P04233 RNY1P1-201ENST00000364372 112 ntBASIC-1.47□□□□□ -2.64
CD74P04233 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.47□□□□□ -2.64
CD74P04233 RNU6-695P-201ENST00000391157 104 ntBASIC-1.47□□□□□ -2.64
CD74P04233 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.47□□□□□ -2.64
CD74P04233 MIR4756-201ENST00000577874 78 ntBASIC-1.47□□□□□ -2.64
CD74P04233 RNA5SP215-201ENST00000363440 122 ntBASIC-1.48□□□□□ -2.65
CD74P04233 AC108019.1-201ENST00000512540 175 ntBASIC-1.48□□□□□ -2.65
CD74P04233 RNU6-919P-201ENST00000516731 104 ntBASIC-1.48□□□□□ -2.65
CD74P04233 AC013734.1-201ENST00000619329 111 ntBASIC-1.48□□□□□ -2.65
CD74P04233 SNORD1B-201ENST00000363091 84 ntBASIC-1.49□□□□□ -2.65
CD74P04233 RNU6-215P-201ENST00000365169 102 ntBASIC-1.49□□□□□ -2.65
CD74P04233 SNORD113-1-201ENST00000365321 69 ntBASIC-1.49□□□□□ -2.65
CD74P04233 MIR3123-201ENST00000583417 75 ntBASIC-1.49□□□□□ -2.65
CD74P04233 AC005520.4-201ENST00000604337 90 ntBASIC-1.49□□□□□ -2.65
CD74P04233 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.49□□□□□ -2.65
CD74P04233 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.5□□□□□ -2.65
CD74P04233 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.5□□□□□ -2.65
CD74P04233 MIR5588-201ENST00000581890 63 ntBASIC-1.5□□□□□ -2.65
CD74P04233 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.51□□□□□ -2.65
CD74P04233 RNU6-315P-201ENST00000362666 107 ntBASIC-1.51□□□□□ -2.65
CD74P04233 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.51□□□□□ -2.65
CD74P04233 RNU6-49P-201ENST00000384256 107 ntBASIC-1.51□□□□□ -2.65
CD74P04233 SNORD116-16-201ENST00000384533 92 ntBASIC-1.51□□□□□ -2.65
CD74P04233 MIR664B-201ENST00000626756 61 ntBASIC-1.51□□□□□ -2.65
CD74P04233 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.52□□□□□ -2.65
CD74P04233 RNU6-974P-201ENST00000384099 108 ntBASIC-1.52□□□□□ -2.65
CD74P04233 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.52□□□□□ -2.65
CD74P04233 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.52□□□□□ -2.65
CD74P04233 MIR579-201ENST00000385221 98 ntBASIC-1.52□□□□□ -2.65
CD74P04233 RNA5SP173-201ENST00000364857 136 ntBASIC-1.53□□□□□ -2.65
CD74P04233 RNU6-44P-201ENST00000384045 107 ntBASIC-1.53□□□□□ -2.65
CD74P04233 MIR548AA1-201ENST00000384971 97 ntBASIC-1.53□□□□□ -2.65
CD74P04233 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.53□□□□□ -2.65
CD74P04233 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.53□□□□□ -2.65
CD74P04233 SNORD115-31-201ENST00000365318 82 ntBASIC-1.54□□□□□ -2.66
CD74P04233 RNU7-151P-201ENST00000516930 53 ntBASIC-1.54□□□□□ -2.66
CD74P04233 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.54□□□□□ -2.66
CD74P04233 RNY4P27-201ENST00000363341 96 ntBASIC-1.55□□□□□ -2.66
CD74P04233 RNU6-979P-201ENST00000383896 107 ntBASIC-1.55□□□□□ -2.66
CD74P04233 RNA5SP89-201ENST00000410300 108 ntBASIC-1.55□□□□□ -2.66
CD74P04233 MIR548AM-201ENST00000584298 74 ntBASIC-1.55□□□□□ -2.66
CD74P04233 U6.97-201ENST00000636904 101 ntBASIC-1.55□□□□□ -2.66
CD74P04233 RNU6-247P-201ENST00000362636 107 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms