Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MIR4490-201ENST00000582647 84 ntBASIC-1.13□□□□□ -2.59
CTDNEP1O95476 SNORD116-24-201ENST00000384549 92 ntBASIC-1.14□□□□□ -2.59
CTDNEP1O95476 U2.18-201ENST00000622185 84 ntBASIC-1.14□□□□□ -2.59
CTDNEP1O95476 RNU6-294P-201ENST00000364999 102 ntBASIC-1.15□□□□□ -2.59
CTDNEP1O95476 RNU6-787P-201ENST00000384032 107 ntBASIC-1.15□□□□□ -2.59
CTDNEP1O95476 SNORA41B-201ENST00000384785 128 ntBASIC-1.15□□□□□ -2.59
CTDNEP1O95476 AC090616.4-201ENST00000448026 115 ntBASIC-1.15□□□□□ -2.59
CTDNEP1O95476 SNORD115-31-201ENST00000365318 82 ntBASIC-1.16□□□□□ -2.6
CTDNEP1O95476 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.16□□□□□ -2.6
CTDNEP1O95476 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.16□□□□□ -2.6
CTDNEP1O95476 MIR520D-201ENST00000385002 87 ntBASIC-1.16□□□□□ -2.6
CTDNEP1O95476 MIR450A2-201ENST00000385022 100 ntBASIC-1.16□□□□□ -2.6
CTDNEP1O95476 RNU6-70P-201ENST00000516438 60 ntBASIC-1.16□□□□□ -2.6
CTDNEP1O95476 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.16□□□□□ -2.6
CTDNEP1O95476 MIR4666B-201ENST00000578142 81 ntBASIC-1.16□□□□□ -2.6
CTDNEP1O95476 SNORD116-16-201ENST00000384533 92 ntBASIC-1.17□□□□□ -2.6
CTDNEP1O95476 RNU6-576P-201ENST00000390854 102 ntBASIC-1.17□□□□□ -2.6
CTDNEP1O95476 RNU6-630P-201ENST00000391258 106 ntBASIC-1.17□□□□□ -2.6
CTDNEP1O95476 RNA5SP67-201ENST00000516422 131 ntBASIC-1.17□□□□□ -2.6
CTDNEP1O95476 MIR3134-201ENST00000579433 74 ntBASIC-1.17□□□□□ -2.6
CTDNEP1O95476 MIR5582-201ENST00000579697 68 ntBASIC-1.17□□□□□ -2.6
CTDNEP1O95476 MIR429-201ENST00000362106 83 ntBASIC-1.18□□□□□ -2.6
CTDNEP1O95476 MIR8485-201ENST00000401372 91 ntBASIC-1.18□□□□□ -2.6
CTDNEP1O95476 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.18□□□□□ -2.6
CTDNEP1O95476 MIR4306-201ENST00000583390 91 ntBASIC-1.18□□□□□ -2.6
CTDNEP1O95476 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.18□□□□□ -2.6
CTDNEP1O95476 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.19□□□□□ -2.6
CTDNEP1O95476 RNU6-164P-201ENST00000364604 103 ntBASIC-1.19□□□□□ -2.6
CTDNEP1O95476 RNU6-608P-201ENST00000383927 104 ntBASIC-1.19□□□□□ -2.6
CTDNEP1O95476 AC091912.2-201ENST00000624798 167 ntBASIC-1.19□□□□□ -2.6
CTDNEP1O95476 MIR6874-201ENST00000635894 71 ntBASIC-1.19□□□□□ -2.6
CTDNEP1O95476 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.2□□□□□ -2.6
CTDNEP1O95476 RNU6-242P-201ENST00000384359 107 ntBASIC-1.2□□□□□ -2.6
CTDNEP1O95476 MIR154-201ENST00000385243 84 ntBASIC-1.2□□□□□ -2.6
CTDNEP1O95476 RNU6-687P-201ENST00000516443 89 ntBASIC-1.2□□□□□ -2.6
CTDNEP1O95476 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.21□□□□□ -2.6
CTDNEP1O95476 AC062037.1-201ENST00000605302 128 ntBASIC-1.21□□□□□ -2.6
CTDNEP1O95476 SNORD1B-201ENST00000363091 84 ntBASIC-1.22□□□□□ -2.6
CTDNEP1O95476 MIR889-201ENST00000401280 79 ntBASIC-1.22□□□□□ -2.6
CTDNEP1O95476 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.22□□□□□ -2.6
CTDNEP1O95476 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.22□□□□□ -2.6
CTDNEP1O95476 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.23□□□□□ -2.61
CTDNEP1O95476 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.23□□□□□ -2.61
CTDNEP1O95476 RNU6-895P-201ENST00000384125 103 ntBASIC-1.24□□□□□ -2.61
CTDNEP1O95476 RNU6-24P-201ENST00000384440 107 ntBASIC-1.24□□□□□ -2.61
CTDNEP1O95476 MIR3170-201ENST00000582699 77 ntBASIC-1.24□□□□□ -2.61
CTDNEP1O95476 MIR6738-201ENST00000619620 64 ntBASIC-1.24□□□□□ -2.61
CTDNEP1O95476 RNA5SP173-201ENST00000364857 136 ntBASIC-1.25□□□□□ -2.61
CTDNEP1O95476 RNU6-820P-201ENST00000384273 107 ntBASIC-1.26□□□□□ -2.61
CTDNEP1O95476 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.26□□□□□ -2.61
CTDNEP1O95476 MIR587-201ENST00000384845 96 ntBASIC-1.26□□□□□ -2.61
CTDNEP1O95476 MIR548AA1-201ENST00000384971 97 ntBASIC-1.27□□□□□ -2.61
CTDNEP1O95476 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.27□□□□□ -2.61
CTDNEP1O95476 MIR409-201ENST00000362237 79 ntBASIC-1.28□□□□□ -2.61
CTDNEP1O95476 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.28□□□□□ -2.61
CTDNEP1O95476 RNU6-258P-201ENST00000390884 101 ntBASIC-1.28□□□□□ -2.61
CTDNEP1O95476 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.28□□□□□ -2.61
CTDNEP1O95476 MIR4324-201ENST00000584846 72 ntBASIC-1.29□□□□□ -2.62
CTDNEP1O95476 MIR6502-201ENST00000617296 76 ntBASIC-1.29□□□□□ -2.62
CTDNEP1O95476 RNU6-10P-201ENST00000384036 107 ntBASIC-1.3□□□□□ -2.62
CTDNEP1O95476 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
CTDNEP1O95476 RNU7-151P-201ENST00000516930 53 ntBASIC-1.3□□□□□ -2.62
CTDNEP1O95476 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.3□□□□□ -2.62
CTDNEP1O95476 RNU6-411P-201ENST00000384451 107 ntBASIC-1.31□□□□□ -2.62
CTDNEP1O95476 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.31□□□□□ -2.62
CTDNEP1O95476 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.31□□□□□ -2.62
CTDNEP1O95476 AC018880.2-201ENST00000414265 201 ntBASIC-1.31□□□□□ -2.62
CTDNEP1O95476 RNU6-79P-201ENST00000362511 107 ntBASIC-1.32□□□□□ -2.62
CTDNEP1O95476 MIR579-201ENST00000385221 98 ntBASIC-1.32□□□□□ -2.62
CTDNEP1O95476 RNU6-172P-201ENST00000411000 93 ntBASIC-1.32□□□□□ -2.62
CTDNEP1O95476 RNU6-542P-201ENST00000516405 103 ntBASIC-1.32□□□□□ -2.62
CTDNEP1O95476 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
CTDNEP1O95476 U7.4-201ENST00000614961 63 ntBASIC-1.32□□□□□ -2.62
CTDNEP1O95476 MIR7978-201ENST00000636158 59 ntBASIC-1.32□□□□□ -2.62
CTDNEP1O95476 RNU6-540P-201ENST00000384622 101 ntBASIC-1.33□□□□□ -2.62
CTDNEP1O95476 AC138207.3-201ENST00000585289 166 ntBASIC-1.33□□□□□ -2.62
CTDNEP1O95476 RNU6-92P-201ENST00000605893 104 ntBASIC-1.33□□□□□ -2.62
CTDNEP1O95476 SNORD73B-201ENST00000364394 72 ntBASIC-1.34□□□□□ -2.62
CTDNEP1O95476 RNU6-523P-201ENST00000516304 54 ntBASIC-1.34□□□□□ -2.62
CTDNEP1O95476 MIR4520-1-201ENST00000582609 70 ntBASIC-1.34□□□□□ -2.62
CTDNEP1O95476 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.35□□□□□ -2.63
CTDNEP1O95476 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.35□□□□□ -2.63
CTDNEP1O95476 RNU6-634P-201ENST00000459134 106 ntBASIC-1.35□□□□□ -2.63
CTDNEP1O95476 RNA5SP170-201ENST00000517150 101 ntBASIC-1.35□□□□□ -2.63
CTDNEP1O95476 RNU6-247P-201ENST00000362636 107 ntBASIC-1.36□□□□□ -2.63
CTDNEP1O95476 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.36□□□□□ -2.63
CTDNEP1O95476 SNORD60.1-201ENST00000362451 73 ntBASIC-1.37□□□□□ -2.63
CTDNEP1O95476 RNU6-563P-201ENST00000364872 108 ntBASIC-1.37□□□□□ -2.63
CTDNEP1O95476 RNU6-669P-201ENST00000365575 107 ntBASIC-1.37□□□□□ -2.63
CTDNEP1O95476 RNU6-573P-201ENST00000383938 106 ntBASIC-1.37□□□□□ -2.63
CTDNEP1O95476 MIR125B1-201ENST00000385236 88 ntBASIC-1.37□□□□□ -2.63
CTDNEP1O95476 RNU6-228P-201ENST00000362700 106 ntBASIC-1.38□□□□□ -2.63
CTDNEP1O95476 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.38□□□□□ -2.63
CTDNEP1O95476 RNU6-663P-201ENST00000391105 106 ntBASIC-1.38□□□□□ -2.63
CTDNEP1O95476 RNU6-995P-201ENST00000391244 107 ntBASIC-1.38□□□□□ -2.63
CTDNEP1O95476 MIR23C-201ENST00000579846 100 ntBASIC-1.38□□□□□ -2.63
CTDNEP1O95476 RNU6-974P-201ENST00000384099 108 ntBASIC-1.39□□□□□ -2.63
CTDNEP1O95476 RNU6-400P-201ENST00000391173 106 ntBASIC-1.39□□□□□ -2.63
CTDNEP1O95476 SNORD63.2-201ENST00000516303 64 ntBASIC-1.39□□□□□ -2.63
CTDNEP1O95476 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms