Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL606753.1-201ENST00000427435 87 ntBASIC-1.48□□□□□ -2.65
TRIM3O75382 RNU6-982P-201ENST00000516216 102 ntBASIC-1.48□□□□□ -2.65
TRIM3O75382 RNU6-32P-201ENST00000383948 107 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 RNU6-13P-201ENST00000384248 107 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 RNU6-12P-201ENST00000384604 107 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 RNU6-41P-201ENST00000384741 107 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 RNU6-400P-201ENST00000391173 106 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 AC074348.1-201ENST00000426503 132 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 MIR3139-201ENST00000579145 76 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 MIR4484-201ENST00000582855 83 ntBASIC-1.49□□□□□ -2.65
TRIM3O75382 RNU6-640P-201ENST00000363693 105 ntBASIC-1.5□□□□□ -2.65
TRIM3O75382 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.5□□□□□ -2.65
TRIM3O75382 RNU6-79P-201ENST00000362511 107 ntBASIC-1.51□□□□□ -2.65
TRIM3O75382 RNA5SP93-201ENST00000362525 114 ntBASIC-1.51□□□□□ -2.65
TRIM3O75382 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.51□□□□□ -2.65
TRIM3O75382 AC018880.2-201ENST00000414265 201 ntBASIC-1.51□□□□□ -2.65
TRIM3O75382 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.51□□□□□ -2.65
TRIM3O75382 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.52□□□□□ -2.65
TRIM3O75382 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.52□□□□□ -2.65
TRIM3O75382 SNORD113-1-201ENST00000365321 69 ntBASIC-1.52□□□□□ -2.65
TRIM3O75382 RNU6-147P-201ENST00000383983 107 ntBASIC-1.52□□□□□ -2.65
TRIM3O75382 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.52□□□□□ -2.65
TRIM3O75382 RNU7-174P-201ENST00000516248 59 ntBASIC-1.52□□□□□ -2.65
TRIM3O75382 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.52□□□□□ -2.65
TRIM3O75382 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.53□□□□□ -2.65
TRIM3O75382 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.53□□□□□ -2.65
TRIM3O75382 SNORD54-201ENST00000459159 67 ntBASIC-1.53□□□□□ -2.65
TRIM3O75382 RNU6-844P-201ENST00000517175 102 ntBASIC-1.53□□□□□ -2.65
TRIM3O75382 AC006160.2-201ENST00000637708 154 ntBASIC-1.53□□□□□ -2.65
TRIM3O75382 RNA5SP405-201ENST00000363059 114 ntBASIC-1.54□□□□□ -2.66
TRIM3O75382 RNU6-675P-201ENST00000384236 104 ntBASIC-1.54□□□□□ -2.66
TRIM3O75382 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.55□□□□□ -2.66
TRIM3O75382 RNU6-458P-201ENST00000384179 107 ntBASIC-1.55□□□□□ -2.66
TRIM3O75382 SNORD20-201ENST00000384550 80 ntBASIC-1.55□□□□□ -2.66
TRIM3O75382 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.55□□□□□ -2.66
TRIM3O75382 U6.58-201ENST00000613107 107 ntBASIC-1.55□□□□□ -2.66
TRIM3O75382 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.56□□□□□ -2.66
TRIM3O75382 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.56□□□□□ -2.66
TRIM3O75382 MT-TM-201ENST00000387377 68 ntBASIC-1.56□□□□□ -2.66
TRIM3O75382 MIR548Q-201ENST00000408404 100 ntBASIC-1.56□□□□□ -2.66
TRIM3O75382 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.57□□□□□ -2.66
TRIM3O75382 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.57□□□□□ -2.66
TRIM3O75382 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.57□□□□□ -2.66
TRIM3O75382 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.58□□□□□ -2.66
TRIM3O75382 RNU6-215P-201ENST00000365169 102 ntBASIC-1.58□□□□□ -2.66
TRIM3O75382 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
TRIM3O75382 RNU6-919P-201ENST00000516731 104 ntBASIC-1.58□□□□□ -2.66
TRIM3O75382 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.58□□□□□ -2.66
TRIM3O75382 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.58□□□□□ -2.66
TRIM3O75382 MIR1297-201ENST00000637311 77 ntBASIC-1.58□□□□□ -2.66
TRIM3O75382 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.59□□□□□ -2.66
TRIM3O75382 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.59□□□□□ -2.66
TRIM3O75382 RNU6-380P-201ENST00000410207 107 ntBASIC-1.59□□□□□ -2.66
TRIM3O75382 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.6□□□□□ -2.67
TRIM3O75382 RNU6-587P-201ENST00000391282 106 ntBASIC-1.6□□□□□ -2.67
TRIM3O75382 MIR548V-201ENST00000584165 80 ntBASIC-1.6□□□□□ -2.67
TRIM3O75382 IGLL4P-201ENST00000614590 133 ntBASIC-1.6□□□□□ -2.67
TRIM3O75382 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
TRIM3O75382 RNU6-698P-201ENST00000363523 107 ntBASIC-1.61□□□□□ -2.67
TRIM3O75382 RNU6-34P-201ENST00000364874 107 ntBASIC-1.61□□□□□ -2.67
TRIM3O75382 RNU6-608P-201ENST00000383927 104 ntBASIC-1.61□□□□□ -2.67
TRIM3O75382 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.61□□□□□ -2.67
TRIM3O75382 RNU6-695P-201ENST00000391157 104 ntBASIC-1.61□□□□□ -2.67
TRIM3O75382 MTND4LP1-201ENST00000446263 157 ntBASIC-1.61□□□□□ -2.67
TRIM3O75382 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.62□□□□□ -2.67
TRIM3O75382 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.62□□□□□ -2.67
TRIM3O75382 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.62□□□□□ -2.67
TRIM3O75382 RNY4P7-201ENST00000364600 96 ntBASIC-1.62□□□□□ -2.67
TRIM3O75382 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.62□□□□□ -2.67
TRIM3O75382 U4.4-201ENST00000620626 117 ntBASIC-1.62□□□□□ -2.67
TRIM3O75382 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.63□□□□□ -2.67
TRIM3O75382 RNU6-696P-201ENST00000390834 107 ntBASIC-1.63□□□□□ -2.67
TRIM3O75382 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.63□□□□□ -2.67
TRIM3O75382 MIR429-201ENST00000362106 83 ntBASIC-1.64□□□□□ -2.67
TRIM3O75382 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.64□□□□□ -2.67
TRIM3O75382 RNU6-630P-201ENST00000391258 106 ntBASIC-1.64□□□□□ -2.67
TRIM3O75382 AL603908.1-201ENST00000406098 201 ntBASIC-1.64□□□□□ -2.67
TRIM3O75382 MIR664A-201ENST00000626086 82 ntBASIC-1.64□□□□□ -2.67
TRIM3O75382 RNU6-668P-201ENST00000364180 107 ntBASIC-1.65□□□□□ -2.67
TRIM3O75382 RNY1P1-201ENST00000364372 112 ntBASIC-1.65□□□□□ -2.67
TRIM3O75382 RNU6-44P-201ENST00000384045 107 ntBASIC-1.65□□□□□ -2.67
TRIM3O75382 RNU6-49P-201ENST00000384256 107 ntBASIC-1.65□□□□□ -2.67
TRIM3O75382 MIR630-201ENST00000384957 97 ntBASIC-1.65□□□□□ -2.67
TRIM3O75382 MIR8053-201ENST00000613344 75 ntBASIC-1.65□□□□□ -2.67
TRIM3O75382 SNORD113.1-201ENST00000363280 73 ntBASIC-1.66□□□□□ -2.68
TRIM3O75382 MIR520D-201ENST00000385002 87 ntBASIC-1.66□□□□□ -2.68
TRIM3O75382 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.66□□□□□ -2.68
TRIM3O75382 RNU6-598P-201ENST00000364017 105 ntBASIC-1.67□□□□□ -2.68
TRIM3O75382 RNU6-841P-201ENST00000383872 107 ntBASIC-1.67□□□□□ -2.68
TRIM3O75382 SNORD45A-201ENST00000384512 84 ntBASIC-1.67□□□□□ -2.68
TRIM3O75382 MIR23C-201ENST00000579846 100 ntBASIC-1.67□□□□□ -2.68
TRIM3O75382 MIR5588-201ENST00000581890 63 ntBASIC-1.67□□□□□ -2.68
TRIM3O75382 MIR3123-201ENST00000583417 75 ntBASIC-1.67□□□□□ -2.68
TRIM3O75382 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.67□□□□□ -2.68
TRIM3O75382 RNU6-315P-201ENST00000362666 107 ntBASIC-1.68□□□□□ -2.68
TRIM3O75382 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.68□□□□□ -2.68
TRIM3O75382 RNU6-194P-201ENST00000363862 105 ntBASIC-1.69□□□□□ -2.68
TRIM3O75382 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.69□□□□□ -2.68
TRIM3O75382 RNA5SP89-201ENST00000410300 108 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms