Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 MIR124-2-201ENST00000385081 109 ntBASIC0.38□□□□□ -2.35
RFXAPO00287 SNORD63.1-201ENST00000516178 80 ntBASIC0.38□□□□□ -2.35
RFXAPO00287 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.37□□□□□ -2.35
RFXAPO00287 AC114755.3-201ENST00000481111 251 ntBASIC0.37□□□□□ -2.35
RFXAPO00287 MIR3170-201ENST00000582699 77 ntBASIC0.37□□□□□ -2.35
RFXAPO00287 SNORA62.4-201ENST00000365504 151 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 RNU6-258P-201ENST00000390884 101 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 AL451105.1-201ENST00000450005 189 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 RNU6-732P-201ENST00000516033 103 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 SNORD63.2-201ENST00000516303 64 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 RNU6-1238P-201ENST00000517215 102 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 MIR4802-201ENST00000581881 80 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 AC104408.1-201ENST00000605241 170 ntBASIC0.36□□□□□ -2.35
RFXAPO00287 RNU6-247P-201ENST00000362636 107 ntBASIC0.35□□□□□ -2.35
RFXAPO00287 MIR520D-201ENST00000385002 87 ntBASIC0.35□□□□□ -2.35
RFXAPO00287 AL445193.1-201ENST00000441183 141 ntBASIC0.35□□□□□ -2.35
RFXAPO00287 MIR148A-201ENST00000362215 68 ntBASIC0.34□□□□□ -2.36
RFXAPO00287 Y_RNA.613-201ENST00000410726 97 ntBASIC0.34□□□□□ -2.36
RFXAPO00287 MIR6854-201ENST00000614935 69 ntBASIC0.34□□□□□ -2.36
RFXAPO00287 SNORD114-5-201ENST00000362928 70 ntBASIC0.33□□□□□ -2.36
RFXAPO00287 SNORA42.1-201ENST00000363515 137 ntBASIC0.33□□□□□ -2.36
RFXAPO00287 SNORD19-201ENST00000391191 68 ntBASIC0.33□□□□□ -2.36
RFXAPO00287 MIR655-201ENST00000362159 97 ntBASIC0.32□□□□□ -2.36
RFXAPO00287 MIR145-201ENST00000384967 88 ntBASIC0.32□□□□□ -2.36
RFXAPO00287 RNU6-1327P-201ENST00000365302 105 ntBASIC0.31□□□□□ -2.36
RFXAPO00287 RNU6-901P-201ENST00000384593 106 ntBASIC0.31□□□□□ -2.36
RFXAPO00287 MIR29B1-201ENST00000385015 81 ntBASIC0.31□□□□□ -2.36
RFXAPO00287 AP002795.1-201ENST00000534879 84 ntBASIC0.31□□□□□ -2.36
RFXAPO00287 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.3□□□□□ -2.36
RFXAPO00287 MIR548AL-201ENST00000578416 97 ntBASIC0.3□□□□□ -2.36
RFXAPO00287 MIR5190-201ENST00000581537 80 ntBASIC0.3□□□□□ -2.36
RFXAPO00287 MIR892B-201ENST00000401279 77 ntBASIC0.29□□□□□ -2.36
RFXAPO00287 RNU7-165P-201ENST00000458864 60 ntBASIC0.29□□□□□ -2.36
RFXAPO00287 MIR5589-201ENST00000579442 60 ntBASIC0.29□□□□□ -2.36
RFXAPO00287 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
RFXAPO00287 RNU6-742P-201ENST00000365289 107 ntBASIC0.28□□□□□ -2.36
RFXAPO00287 SNORD38.3-201ENST00000516599 73 ntBASIC0.28□□□□□ -2.36
RFXAPO00287 MIR4280-201ENST00000582178 76 ntBASIC0.28□□□□□ -2.36
RFXAPO00287 RNA5SP214-201ENST00000363378 118 ntBASIC0.27□□□□□ -2.37
RFXAPO00287 RNU6-1008P-201ENST00000384160 104 ntBASIC0.27□□□□□ -2.37
RFXAPO00287 RNU6-929P-201ENST00000384429 107 ntBASIC0.27□□□□□ -2.37
RFXAPO00287 MIR610-201ENST00000385139 96 ntBASIC0.27□□□□□ -2.37
RFXAPO00287 MIR548Q-201ENST00000408404 100 ntBASIC0.27□□□□□ -2.37
RFXAPO00287 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
RFXAPO00287 MIR4315-1-201ENST00000636800 73 ntBASIC0.27□□□□□ -2.37
RFXAPO00287 MIR4315-2-201ENST00000640925 73 ntBASIC0.27□□□□□ -2.37
RFXAPO00287 RNU7-159P-201ENST00000459284 62 ntBASIC0.26□□□□□ -2.37
RFXAPO00287 RNU6-1111P-201ENST00000391118 107 ntBASIC0.25□□□□□ -2.37
RFXAPO00287 RNU6-530P-201ENST00000391180 107 ntBASIC0.25□□□□□ -2.37
RFXAPO00287 RNU6-1233P-201ENST00000362922 102 ntBASIC0.24□□□□□ -2.37
RFXAPO00287 SNORD114-9-201ENST00000364370 72 ntBASIC0.24□□□□□ -2.37
RFXAPO00287 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
RFXAPO00287 AL627230.5-201ENST00000619807 58 ntBASIC0.24□□□□□ -2.37
RFXAPO00287 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
RFXAPO00287 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
RFXAPO00287 SNORD49B-201ENST00000365172 72 ntBASIC0.2□□□□□ -2.38
RFXAPO00287 MIR6851-201ENST00000617060 67 ntBASIC0.2□□□□□ -2.38
RFXAPO00287 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
RFXAPO00287 MIR548H4-201ENST00000408689 111 ntBASIC0.19□□□□□ -2.38
RFXAPO00287 RNU6-1250P-201ENST00000391218 107 ntBASIC0.18□□□□□ -2.38
RFXAPO00287 MIR4743-201ENST00000584576 69 ntBASIC0.18□□□□□ -2.38
RFXAPO00287 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
RFXAPO00287 AL590491.3-201ENST00000610731 82 ntBASIC0.17□□□□□ -2.38
RFXAPO00287 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.17□□□□□ -2.38
RFXAPO00287 RNU6-608P-201ENST00000383927 104 ntBASIC0.16□□□□□ -2.38
RFXAPO00287 RNU6-721P-201ENST00000410155 105 ntBASIC0.16□□□□□ -2.38
RFXAPO00287 SNORD18.2-201ENST00000459604 70 ntBASIC0.16□□□□□ -2.38
RFXAPO00287 MIR1468-201ENST00000410600 86 ntBASIC0.15□□□□□ -2.39
RFXAPO00287 RNY3P8-201ENST00000411366 126 ntBASIC0.15□□□□□ -2.39
RFXAPO00287 SNORD22.1-201ENST00000516331 125 ntBASIC0.15□□□□□ -2.39
RFXAPO00287 RNA5SP169-201ENST00000517268 117 ntBASIC0.15□□□□□ -2.39
RFXAPO00287 RNU6-1204P-201ENST00000363948 107 ntBASIC0.14□□□□□ -2.39
RFXAPO00287 Y_RNA.699-201ENST00000516803 93 ntBASIC0.14□□□□□ -2.39
RFXAPO00287 MIR5683-201ENST00000636514 76 ntBASIC0.14□□□□□ -2.39
RFXAPO00287 Y_RNA.321-201ENST00000365149 102 ntBASIC0.13□□□□□ -2.39
RFXAPO00287 SNORA26.4-201ENST00000391188 123 ntBASIC0.13□□□□□ -2.39
RFXAPO00287 SNORD45.2-201ENST00000363552 72 ntBASIC0.12□□□□□ -2.39
RFXAPO00287 RNU6-822P-201ENST00000362707 106 ntBASIC0.11□□□□□ -2.39
RFXAPO00287 RNU6-724P-201ENST00000390958 105 ntBASIC0.11□□□□□ -2.39
RFXAPO00287 RPL35AP4-201ENST00000412007 102 ntBASIC0.11□□□□□ -2.39
RFXAPO00287 RNA5SP66-201ENST00000517178 101 ntBASIC0.11□□□□□ -2.39
RFXAPO00287 SNORA27.2-201ENST00000363365 126 ntBASIC0.1□□□□□ -2.39
RFXAPO00287 MIR4426-201ENST00000640330 63 ntBASIC0.1□□□□□ -2.39
RFXAPO00287 MIR202-201ENST00000362219 110 ntBASIC0.09□□□□□ -2.4
RFXAPO00287 SNORD114-11-201ENST00000363738 75 ntBASIC0.09□□□□□ -2.4
RFXAPO00287 SNORD114-17-201ENST00000364699 75 ntBASIC0.09□□□□□ -2.4
RFXAPO00287 RNU6-46P-201ENST00000383860 107 ntBASIC0.09□□□□□ -2.4
RFXAPO00287 Y_RNA.185-201ENST00000363894 100 ntBASIC0.08□□□□□ -2.4
RFXAPO00287 RNA5SP25-201ENST00000410815 110 ntBASIC0.08□□□□□ -2.4
RFXAPO00287 AL353691.2-201ENST00000443795 59 ntBASIC0.08□□□□□ -2.4
RFXAPO00287 snoU13.19-201ENST00000459148 104 ntBASIC0.08□□□□□ -2.4
RFXAPO00287 MIR4290-201ENST00000583807 95 ntBASIC0.08□□□□□ -2.4
RFXAPO00287 RNU6-59P-201ENST00000384787 107 ntBASIC0.07□□□□□ -2.4
RFXAPO00287 MIR518B-201ENST00000385127 83 ntBASIC0.07□□□□□ -2.4
RFXAPO00287 SNORD75.1-201ENST00000408373 60 ntBASIC0.07□□□□□ -2.4
RFXAPO00287 AP000533.3-201ENST00000447704 118 ntBASIC0.07□□□□□ -2.4
RFXAPO00287 MIR4667-201ENST00000578933 66 ntBASIC0.07□□□□□ -2.4
RFXAPO00287 MIR4493-201ENST00000584016 73 ntBASIC0.07□□□□□ -2.4
RFXAPO00287 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms