Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-34P-201ENST00000364874 107 ntBASIC-0.77□□□□□ -2.53
TRIM49D1C9J1S8 MIR527-201ENST00000385244 85 ntBASIC-0.77□□□□□ -2.53
TRIM49D1C9J1S8 SNORD113-2-201ENST00000391082 72 ntBASIC-0.77□□□□□ -2.53
TRIM49D1C9J1S8 MIR8053-201ENST00000613344 75 ntBASIC-0.77□□□□□ -2.53
TRIM49D1C9J1S8 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.78□□□□□ -2.53
TRIM49D1C9J1S8 MT-TQ-201ENST00000387372 72 ntBASIC-0.78□□□□□ -2.53
TRIM49D1C9J1S8 SNORA26.2-201ENST00000390922 122 ntBASIC-0.78□□□□□ -2.53
TRIM49D1C9J1S8 RNU6-380P-201ENST00000410207 107 ntBASIC-0.78□□□□□ -2.53
TRIM49D1C9J1S8 MTND4LP1-201ENST00000446263 157 ntBASIC-0.78□□□□□ -2.53
TRIM49D1C9J1S8 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.79□□□□□ -2.54
TRIM49D1C9J1S8 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.79□□□□□ -2.54
TRIM49D1C9J1S8 RPL35AP4-201ENST00000412007 102 ntBASIC-0.79□□□□□ -2.54
TRIM49D1C9J1S8 RNU6-523P-201ENST00000516304 54 ntBASIC-0.79□□□□□ -2.54
TRIM49D1C9J1S8 MIR3681-201ENST00000580089 72 ntBASIC-0.79□□□□□ -2.54
TRIM49D1C9J1S8 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.8□□□□□ -2.54
TRIM49D1C9J1S8 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.81□□□□□ -2.54
TRIM49D1C9J1S8 RNU6-857P-201ENST00000515893 110 ntBASIC-0.82□□□□□ -2.54
TRIM49D1C9J1S8 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.82□□□□□ -2.54
TRIM49D1C9J1S8 MIR4499-201ENST00000584834 69 ntBASIC-0.82□□□□□ -2.54
TRIM49D1C9J1S8 RNU6-895P-201ENST00000384125 103 ntBASIC-0.83□□□□□ -2.54
TRIM49D1C9J1S8 RNU6-540P-201ENST00000384622 101 ntBASIC-0.83□□□□□ -2.54
TRIM49D1C9J1S8 MIR520D-201ENST00000385002 87 ntBASIC-0.83□□□□□ -2.54
TRIM49D1C9J1S8 MIR507-201ENST00000385234 94 ntBASIC-0.83□□□□□ -2.54
TRIM49D1C9J1S8 uc_338.19-201ENST00000616808 99 ntBASIC-0.83□□□□□ -2.54
TRIM49D1C9J1S8 RNA5SP26-201ENST00000362406 119 ntBASIC-0.84□□□□□ -2.54
TRIM49D1C9J1S8 SNORD1B-201ENST00000363091 84 ntBASIC-0.84□□□□□ -2.54
TRIM49D1C9J1S8 SNORD115-33-201ENST00000363723 82 ntBASIC-0.84□□□□□ -2.54
TRIM49D1C9J1S8 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.84□□□□□ -2.54
TRIM49D1C9J1S8 snoU13.19-201ENST00000459148 104 ntBASIC-0.84□□□□□ -2.54
TRIM49D1C9J1S8 MIR548Q-201ENST00000408404 100 ntBASIC-0.85□□□□□ -2.55
TRIM49D1C9J1S8 AL353691.2-201ENST00000443795 59 ntBASIC-0.85□□□□□ -2.55
TRIM49D1C9J1S8 MIR548AX-201ENST00000580117 73 ntBASIC-0.85□□□□□ -2.55
TRIM49D1C9J1S8 MIR5683-201ENST00000636514 76 ntBASIC-0.85□□□□□ -2.55
TRIM49D1C9J1S8 RNA5SP215-201ENST00000363440 122 ntBASIC-0.86□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-411P-201ENST00000384451 107 ntBASIC-0.86□□□□□ -2.55
TRIM49D1C9J1S8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
TRIM49D1C9J1S8 MIR3202-2-201ENST00000635980 79 ntBASIC-0.86□□□□□ -2.55
TRIM49D1C9J1S8 SNORD116-16-201ENST00000384533 92 ntBASIC-0.87□□□□□ -2.55
TRIM49D1C9J1S8 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.87□□□□□ -2.55
TRIM49D1C9J1S8 SNORD83B-201ENST00000386745 93 ntBASIC-0.87□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-696P-201ENST00000390834 107 ntBASIC-0.87□□□□□ -2.55
TRIM49D1C9J1S8 SNORD57-201ENST00000448188 72 ntBASIC-0.87□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.87□□□□□ -2.55
TRIM49D1C9J1S8 SNORD78.1-201ENST00000390866 65 ntBASIC-0.88□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-630P-201ENST00000391258 106 ntBASIC-0.88□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-279P-201ENST00000391297 101 ntBASIC-0.88□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.88□□□□□ -2.55
TRIM49D1C9J1S8 snoU83B.1-201ENST00000517136 88 ntBASIC-0.88□□□□□ -2.55
TRIM49D1C9J1S8 U7.4-201ENST00000614961 63 ntBASIC-0.88□□□□□ -2.55
TRIM49D1C9J1S8 MIR579-201ENST00000385221 98 ntBASIC-0.89□□□□□ -2.55
TRIM49D1C9J1S8 RNU4-63P-201ENST00000411313 118 ntBASIC-0.89□□□□□ -2.55
TRIM49D1C9J1S8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.89□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-258P-201ENST00000390884 101 ntBASIC-0.9□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-634P-201ENST00000459134 106 ntBASIC-0.9□□□□□ -2.55
TRIM49D1C9J1S8 MIR6818-201ENST00000621576 65 ntBASIC-0.9□□□□□ -2.55
TRIM49D1C9J1S8 RNU6-608P-201ENST00000383927 104 ntBASIC-0.91□□□□□ -2.56
TRIM49D1C9J1S8 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.91□□□□□ -2.56
TRIM49D1C9J1S8 RNU6-663P-201ENST00000391105 106 ntBASIC-0.91□□□□□ -2.56
TRIM49D1C9J1S8 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.92□□□□□ -2.56
TRIM49D1C9J1S8 MIR8485-201ENST00000401372 91 ntBASIC-0.93□□□□□ -2.56
TRIM49D1C9J1S8 AC090616.4-201ENST00000448026 115 ntBASIC-0.93□□□□□ -2.56
TRIM49D1C9J1S8 RNU6-30P-201ENST00000384561 107 ntBASIC-0.94□□□□□ -2.56
TRIM49D1C9J1S8 RNU6-24P-201ENST00000384440 107 ntBASIC-0.95□□□□□ -2.56
TRIM49D1C9J1S8 RNU6-172P-201ENST00000411000 93 ntBASIC-0.95□□□□□ -2.56
TRIM49D1C9J1S8 MIR3170-201ENST00000582699 77 ntBASIC-0.95□□□□□ -2.56
TRIM49D1C9J1S8 MIR6874-201ENST00000635894 71 ntBASIC-0.95□□□□□ -2.56
TRIM49D1C9J1S8 SNORD60.1-201ENST00000362451 73 ntBASIC-0.96□□□□□ -2.56
TRIM49D1C9J1S8 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.96□□□□□ -2.56
TRIM49D1C9J1S8 SNORD30.1-201ENST00000391309 70 ntBASIC-0.97□□□□□ -2.56
TRIM49D1C9J1S8 RNU7-151P-201ENST00000516930 53 ntBASIC-0.97□□□□□ -2.56
TRIM49D1C9J1S8 MIR4490-201ENST00000582647 84 ntBASIC-0.97□□□□□ -2.56
TRIM49D1C9J1S8 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.97□□□□□ -2.56
TRIM49D1C9J1S8 RNU6-974P-201ENST00000384099 108 ntBASIC-0.98□□□□□ -2.57
TRIM49D1C9J1S8 MIR1302-4-201ENST00000408701 150 ntBASIC-0.98□□□□□ -2.57
TRIM49D1C9J1S8 RNU6-542P-201ENST00000516405 103 ntBASIC-0.98□□□□□ -2.57
TRIM49D1C9J1S8 MIR378F-201ENST00000578143 78 ntBASIC-0.98□□□□□ -2.57
TRIM49D1C9J1S8 AC005520.4-201ENST00000604337 90 ntBASIC-0.98□□□□□ -2.57
TRIM49D1C9J1S8 RNU6-92P-201ENST00000605893 104 ntBASIC-0.98□□□□□ -2.57
TRIM49D1C9J1S8 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.98□□□□□ -2.57
TRIM49D1C9J1S8 MIR7978-201ENST00000636158 59 ntBASIC-0.98□□□□□ -2.57
TRIM49D1C9J1S8 MIR429-201ENST00000362106 83 ntBASIC-0.99□□□□□ -2.57
TRIM49D1C9J1S8 RNA5SP192-201ENST00000364404 120 ntBASIC-0.99□□□□□ -2.57
TRIM49D1C9J1S8 MIR29B1-201ENST00000385015 81 ntBASIC-0.99□□□□□ -2.57
TRIM49D1C9J1S8 Y_RNA.603-201ENST00000410571 108 ntBASIC-1□□□□□ -2.57
TRIM49D1C9J1S8 AC091912.2-201ENST00000624798 167 ntBASIC-1□□□□□ -2.57
TRIM49D1C9J1S8 MIR548AA1-201ENST00000384971 97 ntBASIC-1.02□□□□□ -2.57
TRIM49D1C9J1S8 U6.111-201ENST00000636093 83 ntBASIC-1.02□□□□□ -2.57
TRIM49D1C9J1S8 SNORA25.4-201ENST00000363666 124 ntBASIC-1.03□□□□□ -2.57
TRIM49D1C9J1S8 SCARNA17-201ENST00000516183 144 ntBASIC-1.03□□□□□ -2.57
TRIM49D1C9J1S8 MIR409-201ENST00000362237 79 ntBASIC-1.04□□□□□ -2.58
TRIM49D1C9J1S8 RNU6-776P-201ENST00000364403 104 ntBASIC-1.04□□□□□ -2.58
TRIM49D1C9J1S8 RNU6-563P-201ENST00000364872 108 ntBASIC-1.04□□□□□ -2.58
TRIM49D1C9J1S8 RNU6-1022P-201ENST00000365049 104 ntBASIC-1.04□□□□□ -2.58
TRIM49D1C9J1S8 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.04□□□□□ -2.58
TRIM49D1C9J1S8 SNORD63.2-201ENST00000516303 64 ntBASIC-1.04□□□□□ -2.58
TRIM49D1C9J1S8 RNY1P9-201ENST00000532431 109 ntBASIC-1.04□□□□□ -2.58
TRIM49D1C9J1S8 RNU6-669P-201ENST00000365575 107 ntBASIC-1.05□□□□□ -2.58
TRIM49D1C9J1S8 RNU6-649P-201ENST00000384463 107 ntBASIC-1.05□□□□□ -2.58
TRIM49D1C9J1S8 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.05□□□□□ -2.58
TRIM49D1C9J1S8 RNU6-231P-201ENST00000517122 103 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms