Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
DNMT3AQ9Y6K1 AL391099.1-201ENST00000624635 187 ntBASIC1.11□□□□□ -2.23
DNMT3AQ9Y6K1 SNORA62.4-201ENST00000365504 151 ntBASIC1.1□□□□□ -2.23
DNMT3AQ9Y6K1 Y_RNA.382-201ENST00000365672 114 ntBASIC1.1□□□□□ -2.23
DNMT3AQ9Y6K1 MIR140-201ENST00000385282 100 ntBASIC1.1□□□□□ -2.23
DNMT3AQ9Y6K1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.1□□□□□ -2.23
DNMT3AQ9Y6K1 RNA5SP67-201ENST00000516422 131 ntBASIC1.1□□□□□ -2.23
DNMT3AQ9Y6K1 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
DNMT3AQ9Y6K1 Y_RNA.519-201ENST00000384553 102 ntBASIC1.09□□□□□ -2.23
DNMT3AQ9Y6K1 MIR643-201ENST00000385267 97 ntBASIC1.09□□□□□ -2.23
DNMT3AQ9Y6K1 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
DNMT3AQ9Y6K1 RNU6-1133P-201ENST00000410963 100 ntBASIC1.09□□□□□ -2.23
DNMT3AQ9Y6K1 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
DNMT3AQ9Y6K1 MIR3925-201ENST00000584674 77 ntBASIC1.09□□□□□ -2.23
DNMT3AQ9Y6K1 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
DNMT3AQ9Y6K1 MIR5704-201ENST00000584029 77 ntBASIC1.08□□□□□ -2.24
DNMT3AQ9Y6K1 MIR8068-201ENST00000618032 68 ntBASIC1.08□□□□□ -2.24
DNMT3AQ9Y6K1 SNORD118-201ENST00000363593 134 ntBASIC1.07□□□□□ -2.24
DNMT3AQ9Y6K1 SNORD114-22-201ENST00000365423 72 ntBASIC1.07□□□□□ -2.24
DNMT3AQ9Y6K1 AP002795.1-201ENST00000534879 84 ntBASIC1.07□□□□□ -2.24
DNMT3AQ9Y6K1 MIR6755-201ENST00000619993 66 ntBASIC1.07□□□□□ -2.24
DNMT3AQ9Y6K1 MIR876-201ENST00000401147 81 ntBASIC1.06□□□□□ -2.24
DNMT3AQ9Y6K1 RNU6-608P-201ENST00000383927 104 ntBASIC1.05□□□□□ -2.24
DNMT3AQ9Y6K1 MIR124-2-201ENST00000385081 109 ntBASIC1.05□□□□□ -2.24
DNMT3AQ9Y6K1 MIR760-201ENST00000390220 80 ntBASIC1.05□□□□□ -2.24
DNMT3AQ9Y6K1 RNU4-54P-201ENST00000516428 129 ntBASIC1.05□□□□□ -2.24
DNMT3AQ9Y6K1 RNU6-176P-201ENST00000517196 105 ntBASIC1.05□□□□□ -2.24
DNMT3AQ9Y6K1 MIR106A-201ENST00000384870 81 ntBASIC1.04□□□□□ -2.24
DNMT3AQ9Y6K1 MIR518A1-201ENST00000385068 85 ntBASIC1.04□□□□□ -2.24
DNMT3AQ9Y6K1 RNU6-1233P-201ENST00000362922 102 ntBASIC1.03□□□□□ -2.24
DNMT3AQ9Y6K1 RNU6-973P-201ENST00000364690 107 ntBASIC1.03□□□□□ -2.24
DNMT3AQ9Y6K1 RNU7-55P-201ENST00000459426 62 ntBASIC1.03□□□□□ -2.24
DNMT3AQ9Y6K1 MIR499B-201ENST00000636498 73 ntBASIC1.03□□□□□ -2.24
DNMT3AQ9Y6K1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
DNMT3AQ9Y6K1 SNORA42.1-201ENST00000363515 137 ntBASIC1.02□□□□□ -2.25
DNMT3AQ9Y6K1 Y_RNA.320-201ENST00000365144 102 ntBASIC1.02□□□□□ -2.25
DNMT3AQ9Y6K1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.02□□□□□ -2.25
DNMT3AQ9Y6K1 PSMC1P5-201ENST00000512850 177 ntBASIC1.02□□□□□ -2.25
DNMT3AQ9Y6K1 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
DNMT3AQ9Y6K1 RNA5SP98-201ENST00000363158 137 ntBASIC1.01□□□□□ -2.25
DNMT3AQ9Y6K1 SNORA40.8-201ENST00000411034 126 ntBASIC1.01□□□□□ -2.25
DNMT3AQ9Y6K1 SNORD71-201ENST00000411292 86 ntBASIC1.01□□□□□ -2.25
DNMT3AQ9Y6K1 AC096531.1-201ENST00000419107 107 ntBASIC1.01□□□□□ -2.25
DNMT3AQ9Y6K1 RNU7-129P-201ENST00000516128 62 ntBASIC1.01□□□□□ -2.25
DNMT3AQ9Y6K1 SCARNA11.2-201ENST00000517183 154 ntBASIC1.01□□□□□ -2.25
DNMT3AQ9Y6K1 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
DNMT3AQ9Y6K1 SNORD114-27-201ENST00000363766 70 ntBASIC1□□□□□ -2.25
DNMT3AQ9Y6K1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
DNMT3AQ9Y6K1 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
DNMT3AQ9Y6K1 RNU6-848P-201ENST00000515948 107 ntBASIC0.99□□□□□ -2.25
DNMT3AQ9Y6K1 RNU6-617P-201ENST00000516147 107 ntBASIC0.99□□□□□ -2.25
DNMT3AQ9Y6K1 RNU6-473P-201ENST00000516164 107 ntBASIC0.99□□□□□ -2.25
DNMT3AQ9Y6K1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.99□□□□□ -2.25
DNMT3AQ9Y6K1 MIR6515-201ENST00000619843 57 ntBASIC0.99□□□□□ -2.25
DNMT3AQ9Y6K1 SNORD60-201ENST00000383903 83 ntBASIC0.98□□□□□ -2.25
DNMT3AQ9Y6K1 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
DNMT3AQ9Y6K1 MIR96-201ENST00000362288 78 ntBASIC0.97□□□□□ -2.25
DNMT3AQ9Y6K1 RNA5SP128-201ENST00000365305 116 ntBASIC0.97□□□□□ -2.25
DNMT3AQ9Y6K1 MIR548N-201ENST00000408742 75 ntBASIC0.97□□□□□ -2.25
DNMT3AQ9Y6K1 RPS29P1-201ENST00000465274 159 ntBASIC0.97□□□□□ -2.25
DNMT3AQ9Y6K1 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
DNMT3AQ9Y6K1 MIR520E-201ENST00000384867 87 ntBASIC0.96□□□□□ -2.26
DNMT3AQ9Y6K1 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
DNMT3AQ9Y6K1 MIR581-201ENST00000384895 96 ntBASIC0.95□□□□□ -2.26
DNMT3AQ9Y6K1 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
DNMT3AQ9Y6K1 RNA5SP480-201ENST00000516840 109 ntBASIC0.95□□□□□ -2.26
DNMT3AQ9Y6K1 MIR5683-201ENST00000636514 76 ntBASIC0.95□□□□□ -2.26
DNMT3AQ9Y6K1 MIR6854-201ENST00000614935 69 ntBASIC0.94□□□□□ -2.26
DNMT3AQ9Y6K1 RNU6-836P-201ENST00000362920 107 ntBASIC0.93□□□□□ -2.26
DNMT3AQ9Y6K1 SNORD114-26-201ENST00000363543 72 ntBASIC0.93□□□□□ -2.26
DNMT3AQ9Y6K1 RNU1-93P-201ENST00000364704 169 ntBASIC0.93□□□□□ -2.26
DNMT3AQ9Y6K1 RNU6-900P-201ENST00000384498 102 ntBASIC0.93□□□□□ -2.26
DNMT3AQ9Y6K1 RNU6-68P-201ENST00000516576 104 ntBASIC0.93□□□□□ -2.26
DNMT3AQ9Y6K1 MIR151B-201ENST00000584249 96 ntBASIC0.93□□□□□ -2.26
DNMT3AQ9Y6K1 AC022709.1-201ENST00000615967 87 ntBASIC0.93□□□□□ -2.26
DNMT3AQ9Y6K1 AC013734.1-201ENST00000619329 111 ntBASIC0.93□□□□□ -2.26
DNMT3AQ9Y6K1 RNU6-455P-201ENST00000384681 107 ntBASIC0.92□□□□□ -2.26
DNMT3AQ9Y6K1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.92□□□□□ -2.26
DNMT3AQ9Y6K1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.92□□□□□ -2.26
DNMT3AQ9Y6K1 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
DNMT3AQ9Y6K1 AC108740.1-201ENST00000498629 225 ntBASIC0.92□□□□□ -2.26
DNMT3AQ9Y6K1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
DNMT3AQ9Y6K1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
DNMT3AQ9Y6K1 Y_RNA.223-201ENST00000364290 113 ntBASIC0.91□□□□□ -2.26
DNMT3AQ9Y6K1 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.91□□□□□ -2.26
DNMT3AQ9Y6K1 MIR6788-201ENST00000618842 66 ntBASIC0.91□□□□□ -2.26
DNMT3AQ9Y6K1 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
DNMT3AQ9Y6K1 MIR548J-201ENST00000408833 112 ntBASIC0.9□□□□□ -2.27
DNMT3AQ9Y6K1 RPL35AP4-201ENST00000412007 102 ntBASIC0.9□□□□□ -2.27
DNMT3AQ9Y6K1 Y_RNA.260-201ENST00000364628 101 ntBASIC0.89□□□□□ -2.27
DNMT3AQ9Y6K1 Y_RNA.406-201ENST00000383984 100 ntBASIC0.89□□□□□ -2.27
DNMT3AQ9Y6K1 AC114755.3-201ENST00000481111 251 ntBASIC0.89□□□□□ -2.27
DNMT3AQ9Y6K1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
DNMT3AQ9Y6K1 RNA5SP224-201ENST00000365069 126 ntBASIC0.88□□□□□ -2.27
DNMT3AQ9Y6K1 SNORD56B-201ENST00000384713 71 ntBASIC0.88□□□□□ -2.27
DNMT3AQ9Y6K1 RNU6-863P-201ENST00000515989 104 ntBASIC0.88□□□□□ -2.27
DNMT3AQ9Y6K1 U6.97-201ENST00000636904 101 ntBASIC0.88□□□□□ -2.27
DNMT3AQ9Y6K1 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
DNMT3AQ9Y6K1 MIR373-201ENST00000362273 69 ntBASIC0.86□□□□□ -2.27
DNMT3AQ9Y6K1 AL353691.2-201ENST00000443795 59 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 329.5 ms