Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNU7-129P-201ENST00000516128 62 ntBASIC1.17□□□□□ -2.22
PCDHGA4Q9Y5G9 PVT1_3.1-201ENST00000620853 95 ntBASIC1.17□□□□□ -2.22
PCDHGA4Q9Y5G9 AL391099.1-201ENST00000624635 187 ntBASIC1.17□□□□□ -2.22
PCDHGA4Q9Y5G9 RNU6-530P-201ENST00000391180 107 ntBASIC1.16□□□□□ -2.22
PCDHGA4Q9Y5G9 Y_RNA.613-201ENST00000410726 97 ntBASIC1.16□□□□□ -2.22
PCDHGA4Q9Y5G9 MIR6779-201ENST00000617283 64 ntBASIC1.16□□□□□ -2.22
PCDHGA4Q9Y5G9 MIR6788-201ENST00000618842 66 ntBASIC1.16□□□□□ -2.22
PCDHGA4Q9Y5G9 MIR6767-201ENST00000637302 66 ntBASIC1.16□□□□□ -2.22
PCDHGA4Q9Y5G9 RNU6-59P-201ENST00000384787 107 ntBASIC1.15□□□□□ -2.23
PCDHGA4Q9Y5G9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.15□□□□□ -2.23
PCDHGA4Q9Y5G9 RNU6-110P-201ENST00000384508 104 ntBASIC1.14□□□□□ -2.23
PCDHGA4Q9Y5G9 RNU6-1111P-201ENST00000391118 107 ntBASIC1.14□□□□□ -2.23
PCDHGA4Q9Y5G9 MIR548H4-201ENST00000408689 111 ntBASIC1.14□□□□□ -2.23
PCDHGA4Q9Y5G9 MIR548J-201ENST00000408833 112 ntBASIC1.14□□□□□ -2.23
PCDHGA4Q9Y5G9 RNU6-863P-201ENST00000515989 104 ntBASIC1.14□□□□□ -2.23
PCDHGA4Q9Y5G9 AC104408.1-201ENST00000605241 170 ntBASIC1.14□□□□□ -2.23
PCDHGA4Q9Y5G9 uc_338.36-201ENST00000622331 158 ntBASIC1.14□□□□□ -2.23
PCDHGA4Q9Y5G9 MIR598-201ENST00000384868 97 ntBASIC1.13□□□□□ -2.23
PCDHGA4Q9Y5G9 RNU7-55P-201ENST00000459426 62 ntBASIC1.12□□□□□ -2.23
PCDHGA4Q9Y5G9 RNU6-973P-201ENST00000364690 107 ntBASIC1.11□□□□□ -2.23
PCDHGA4Q9Y5G9 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
PCDHGA4Q9Y5G9 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
PCDHGA4Q9Y5G9 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
PCDHGA4Q9Y5G9 RNA5SP325-201ENST00000363756 130 ntBASIC1.09□□□□□ -2.23
PCDHGA4Q9Y5G9 AC108740.1-201ENST00000498629 225 ntBASIC1.09□□□□□ -2.23
PCDHGA4Q9Y5G9 MIR1468-201ENST00000410600 86 ntBASIC1.07□□□□□ -2.24
PCDHGA4Q9Y5G9 RNU6-1238P-201ENST00000517215 102 ntBASIC1.07□□□□□ -2.24
PCDHGA4Q9Y5G9 AC096531.1-201ENST00000419107 107 ntBASIC1.06□□□□□ -2.24
PCDHGA4Q9Y5G9 RNU6-732P-201ENST00000516033 103 ntBASIC1.06□□□□□ -2.24
PCDHGA4Q9Y5G9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
PCDHGA4Q9Y5G9 RNU6-900P-201ENST00000384498 102 ntBASIC1.05□□□□□ -2.24
PCDHGA4Q9Y5G9 uc_338.17-201ENST00000619633 179 ntBASIC1.05□□□□□ -2.24
PCDHGA4Q9Y5G9 RPL39P28-201ENST00000465655 155 ntBASIC1.04□□□□□ -2.24
PCDHGA4Q9Y5G9 MIR4317-201ENST00000637586 65 ntBASIC1.03□□□□□ -2.24
PCDHGA4Q9Y5G9 SNORD44.1-201ENST00000363202 61 ntBASIC1.02□□□□□ -2.25
PCDHGA4Q9Y5G9 RNU6-1326P-201ENST00000391262 107 ntBASIC1.02□□□□□ -2.25
PCDHGA4Q9Y5G9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.02□□□□□ -2.25
PCDHGA4Q9Y5G9 AC211469.2-201ENST00000605461 205 ntBASIC1.02□□□□□ -2.25
PCDHGA4Q9Y5G9 MIR548Q-201ENST00000408404 100 ntBASIC1.01□□□□□ -2.25
PCDHGA4Q9Y5G9 RNA5SP436-201ENST00000516020 115 ntBASIC1.01□□□□□ -2.25
PCDHGA4Q9Y5G9 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
PCDHGA4Q9Y5G9 Y_RNA.699-201ENST00000516803 93 ntBASIC1□□□□□ -2.25
PCDHGA4Q9Y5G9 PSMC1P5-201ENST00000512850 177 ntBASIC0.99□□□□□ -2.25
PCDHGA4Q9Y5G9 MIR5000-201ENST00000577717 103 ntBASIC0.99□□□□□ -2.25
PCDHGA4Q9Y5G9 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
PCDHGA4Q9Y5G9 SNORA27.2-201ENST00000363365 126 ntBASIC0.98□□□□□ -2.25
PCDHGA4Q9Y5G9 RNU6-258P-201ENST00000390884 101 ntBASIC0.98□□□□□ -2.25
PCDHGA4Q9Y5G9 MIR6507-201ENST00000613630 70 ntBASIC0.98□□□□□ -2.25
PCDHGA4Q9Y5G9 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
PCDHGA4Q9Y5G9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.97□□□□□ -2.25
PCDHGA4Q9Y5G9 AC138207.3-201ENST00000585289 166 ntBASIC0.97□□□□□ -2.25
PCDHGA4Q9Y5G9 Y_RNA.345-201ENST00000365384 92 ntBASIC0.96□□□□□ -2.26
PCDHGA4Q9Y5G9 RNU6-455P-201ENST00000384681 107 ntBASIC0.96□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR5704-201ENST00000584029 77 ntBASIC0.96□□□□□ -2.26
PCDHGA4Q9Y5G9 RNU6-1047P-201ENST00000364418 107 ntBASIC0.95□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR146A-201ENST00000385201 99 ntBASIC0.95□□□□□ -2.26
PCDHGA4Q9Y5G9 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR6514-201ENST00000622549 70 ntBASIC0.95□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR4426-201ENST00000640330 63 ntBASIC0.95□□□□□ -2.26
PCDHGA4Q9Y5G9 RNU6-127P-201ENST00000390897 107 ntBASIC0.94□□□□□ -2.26
PCDHGA4Q9Y5G9 RN7SL793P-201ENST00000583259 296 ntBASIC0.94□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR6854-201ENST00000614935 69 ntBASIC0.94□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR520D-201ENST00000385002 87 ntBASIC0.93□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR124-2-201ENST00000385081 109 ntBASIC0.93□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR6857-201ENST00000613267 93 ntBASIC0.93□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR8068-201ENST00000618032 68 ntBASIC0.93□□□□□ -2.26
PCDHGA4Q9Y5G9 RNU6-1233P-201ENST00000362922 102 ntBASIC0.92□□□□□ -2.26
PCDHGA4Q9Y5G9 SNORA42.1-201ENST00000363515 137 ntBASIC0.92□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR216A-201ENST00000385063 110 ntBASIC0.92□□□□□ -2.26
PCDHGA4Q9Y5G9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
PCDHGA4Q9Y5G9 SNORD19-201ENST00000391191 68 ntBASIC0.92□□□□□ -2.26
PCDHGA4Q9Y5G9 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
PCDHGA4Q9Y5G9 CR383656.4-201ENST00000546909 122 ntBASIC0.91□□□□□ -2.26
PCDHGA4Q9Y5G9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.91□□□□□ -2.26
PCDHGA4Q9Y5G9 RNU6-894P-201ENST00000517094 105 ntBASIC0.9□□□□□ -2.27
PCDHGA4Q9Y5G9 Y_RNA.206-201ENST00000364136 102 ntBASIC0.89□□□□□ -2.27
PCDHGA4Q9Y5G9 MIR103A1-201ENST00000362165 78 ntBASIC0.87□□□□□ -2.27
PCDHGA4Q9Y5G9 RNU6-901P-201ENST00000384593 106 ntBASIC0.87□□□□□ -2.27
PCDHGA4Q9Y5G9 RNA5SP169-201ENST00000517268 117 ntBASIC0.87□□□□□ -2.27
PCDHGA4Q9Y5G9 MIR148A-201ENST00000362215 68 ntBASIC0.86□□□□□ -2.27
PCDHGA4Q9Y5G9 RNU6-361P-201ENST00000364454 107 ntBASIC0.86□□□□□ -2.27
PCDHGA4Q9Y5G9 MIR643-201ENST00000385267 97 ntBASIC0.86□□□□□ -2.27
PCDHGA4Q9Y5G9 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
PCDHGA4Q9Y5G9 RNY1P9-201ENST00000532431 109 ntBASIC0.85□□□□□ -2.27
PCDHGA4Q9Y5G9 Y_RNA.374-201ENST00000365606 101 ntBASIC0.84□□□□□ -2.27
PCDHGA4Q9Y5G9 RNU6-815P-201ENST00000384080 113 ntBASIC0.84□□□□□ -2.27
PCDHGA4Q9Y5G9 RNA5SP163-201ENST00000410304 99 ntBASIC0.84□□□□□ -2.27
PCDHGA4Q9Y5G9 SNORA68.3-201ENST00000515906 83 ntBASIC0.84□□□□□ -2.27
PCDHGA4Q9Y5G9 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
PCDHGA4Q9Y5G9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
PCDHGA4Q9Y5G9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
PCDHGA4Q9Y5G9 RNU6-180P-201ENST00000516697 61 ntBASIC0.83□□□□□ -2.28
PCDHGA4Q9Y5G9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.82□□□□□ -2.28
PCDHGA4Q9Y5G9 RNU6-300P-201ENST00000459080 104 ntBASIC0.82□□□□□ -2.28
PCDHGA4Q9Y5G9 AC114755.3-201ENST00000481111 251 ntBASIC0.81□□□□□ -2.28
PCDHGA4Q9Y5G9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
PCDHGA4Q9Y5G9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
PCDHGA4Q9Y5G9 SNORD56B-201ENST00000384713 71 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 255.7 ms