Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 MIR6515-201ENST00000619843 57 ntBASIC0.64□□□□□ -2.31
ZCCHC4Q9H5U6 uc_338.36-201ENST00000622331 158 ntBASIC0.64□□□□□ -2.31
ZCCHC4Q9H5U6 MIR373-201ENST00000362273 69 ntBASIC0.63□□□□□ -2.31
ZCCHC4Q9H5U6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
ZCCHC4Q9H5U6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ZCCHC4Q9H5U6 RNU6-742P-201ENST00000365289 107 ntBASIC0.62□□□□□ -2.31
ZCCHC4Q9H5U6 RNU6-945P-201ENST00000383947 107 ntBASIC0.62□□□□□ -2.31
ZCCHC4Q9H5U6 MIR548J-201ENST00000408833 112 ntBASIC0.62□□□□□ -2.31
ZCCHC4Q9H5U6 RNU7-129P-201ENST00000516128 62 ntBASIC0.62□□□□□ -2.31
ZCCHC4Q9H5U6 MIR7111-201ENST00000619751 72 ntBASIC0.62□□□□□ -2.31
ZCCHC4Q9H5U6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
ZCCHC4Q9H5U6 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
ZCCHC4Q9H5U6 RNU6-258P-201ENST00000390884 101 ntBASIC0.61□□□□□ -2.31
ZCCHC4Q9H5U6 RNU6-995P-201ENST00000391244 107 ntBASIC0.61□□□□□ -2.31
ZCCHC4Q9H5U6 MIR3170-201ENST00000582699 77 ntBASIC0.61□□□□□ -2.31
ZCCHC4Q9H5U6 MIR8068-201ENST00000618032 68 ntBASIC0.61□□□□□ -2.31
ZCCHC4Q9H5U6 AL391099.1-201ENST00000624635 187 ntBASIC0.61□□□□□ -2.31
ZCCHC4Q9H5U6 MIR103A1-201ENST00000362165 78 ntBASIC0.6□□□□□ -2.31
ZCCHC4Q9H5U6 RNU6-1008P-201ENST00000384160 104 ntBASIC0.6□□□□□ -2.31
ZCCHC4Q9H5U6 MIR548H2-201ENST00000408874 88 ntBASIC0.6□□□□□ -2.31
ZCCHC4Q9H5U6 MIR5000-201ENST00000577717 103 ntBASIC0.6□□□□□ -2.31
ZCCHC4Q9H5U6 RNU6-127P-201ENST00000390897 107 ntBASIC0.59□□□□□ -2.31
ZCCHC4Q9H5U6 SNORA68.3-201ENST00000515906 83 ntBASIC0.59□□□□□ -2.31
ZCCHC4Q9H5U6 SNORD63.1-201ENST00000516178 80 ntBASIC0.59□□□□□ -2.31
ZCCHC4Q9H5U6 MIR5704-201ENST00000584029 77 ntBASIC0.59□□□□□ -2.31
ZCCHC4Q9H5U6 RNA5SP98-201ENST00000363158 137 ntBASIC0.58□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-973P-201ENST00000364690 107 ntBASIC0.58□□□□□ -2.32
ZCCHC4Q9H5U6 AC096531.1-201ENST00000419107 107 ntBASIC0.58□□□□□ -2.32
ZCCHC4Q9H5U6 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.58□□□□□ -2.32
ZCCHC4Q9H5U6 SNORD63.2-201ENST00000516303 64 ntBASIC0.58□□□□□ -2.32
ZCCHC4Q9H5U6 CYP3A137P-201ENST00000562436 69 ntBASIC0.58□□□□□ -2.32
ZCCHC4Q9H5U6 MIR6835-201ENST00000621552 64 ntBASIC0.58□□□□□ -2.32
ZCCHC4Q9H5U6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
ZCCHC4Q9H5U6 MIR598-201ENST00000384868 97 ntBASIC0.57□□□□□ -2.32
ZCCHC4Q9H5U6 MIR520D-201ENST00000385002 87 ntBASIC0.57□□□□□ -2.32
ZCCHC4Q9H5U6 snoR1.1-201ENST00000628177 80 ntBASIC0.57□□□□□ -2.32
ZCCHC4Q9H5U6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
ZCCHC4Q9H5U6 MIR489-201ENST00000384923 84 ntBASIC0.56□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.56□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-1204P-201ENST00000363948 107 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-815P-201ENST00000384080 113 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-59P-201ENST00000384787 107 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 SNORD19-201ENST00000391191 68 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 Y_RNA.613-201ENST00000410726 97 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 AC108740.1-201ENST00000498629 225 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 MIR6507-201ENST00000613630 70 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 AC022709.1-201ENST00000615967 87 ntBASIC0.55□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-822P-201ENST00000362707 106 ntBASIC0.54□□□□□ -2.32
ZCCHC4Q9H5U6 SNORA42.1-201ENST00000363515 137 ntBASIC0.54□□□□□ -2.32
ZCCHC4Q9H5U6 SNORA62.4-201ENST00000365504 151 ntBASIC0.54□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-900P-201ENST00000384498 102 ntBASIC0.54□□□□□ -2.32
ZCCHC4Q9H5U6 MIR508-201ENST00000384857 115 ntBASIC0.54□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-1238P-201ENST00000517215 102 ntBASIC0.54□□□□□ -2.32
ZCCHC4Q9H5U6 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
ZCCHC4Q9H5U6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-721P-201ENST00000410155 105 ntBASIC0.53□□□□□ -2.32
ZCCHC4Q9H5U6 RNU6-732P-201ENST00000516033 103 ntBASIC0.53□□□□□ -2.32
ZCCHC4Q9H5U6 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
ZCCHC4Q9H5U6 RNU6-530P-201ENST00000391180 107 ntBASIC0.52□□□□□ -2.33
ZCCHC4Q9H5U6 AC114755.3-201ENST00000481111 251 ntBASIC0.52□□□□□ -2.33
ZCCHC4Q9H5U6 AP002795.1-201ENST00000534879 84 ntBASIC0.52□□□□□ -2.33
ZCCHC4Q9H5U6 MIRLET7D-201ENST00000362263 87 ntBASIC0.51□□□□□ -2.33
ZCCHC4Q9H5U6 RNU6-455P-201ENST00000384681 107 ntBASIC0.51□□□□□ -2.33
ZCCHC4Q9H5U6 SNORD56B-201ENST00000384713 71 ntBASIC0.51□□□□□ -2.33
ZCCHC4Q9H5U6 MIR643-201ENST00000385267 97 ntBASIC0.51□□□□□ -2.33
ZCCHC4Q9H5U6 RNU6-1133P-201ENST00000410963 100 ntBASIC0.51□□□□□ -2.33
ZCCHC4Q9H5U6 AC104408.1-201ENST00000605241 170 ntBASIC0.51□□□□□ -2.33
ZCCHC4Q9H5U6 MIR6514-201ENST00000622549 70 ntBASIC0.51□□□□□ -2.33
ZCCHC4Q9H5U6 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
ZCCHC4Q9H5U6 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
ZCCHC4Q9H5U6 MIR216A-201ENST00000385063 110 ntBASIC0.49□□□□□ -2.33
ZCCHC4Q9H5U6 RNU6-180P-201ENST00000516697 61 ntBASIC0.49□□□□□ -2.33
ZCCHC4Q9H5U6 U6.103-201ENST00000637085 61 ntBASIC0.49□□□□□ -2.33
ZCCHC4Q9H5U6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
ZCCHC4Q9H5U6 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
ZCCHC4Q9H5U6 MIR124-2-201ENST00000385081 109 ntBASIC0.48□□□□□ -2.33
ZCCHC4Q9H5U6 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
ZCCHC4Q9H5U6 SNORD45.2-201ENST00000363552 72 ntBASIC0.47□□□□□ -2.33
ZCCHC4Q9H5U6 CR383656.4-201ENST00000546909 122 ntBASIC0.46□□□□□ -2.34
ZCCHC4Q9H5U6 MIR6854-201ENST00000614935 69 ntBASIC0.46□□□□□ -2.34
ZCCHC4Q9H5U6 MIR6513-201ENST00000621188 64 ntBASIC0.46□□□□□ -2.34
ZCCHC4Q9H5U6 MIR655-201ENST00000362159 97 ntBASIC0.45□□□□□ -2.34
ZCCHC4Q9H5U6 RNU6-1111P-201ENST00000391118 107 ntBASIC0.45□□□□□ -2.34
ZCCHC4Q9H5U6 RNA5SP163-201ENST00000410304 99 ntBASIC0.45□□□□□ -2.34
ZCCHC4Q9H5U6 MIR1468-201ENST00000410600 86 ntBASIC0.45□□□□□ -2.34
ZCCHC4Q9H5U6 AC244250.2-201ENST00000418731 148 ntBASIC0.45□□□□□ -2.34
ZCCHC4Q9H5U6 RNA5SP480-201ENST00000516840 109 ntBASIC0.45□□□□□ -2.34
ZCCHC4Q9H5U6 AC069113.3-201ENST00000521019 150 ntBASIC0.45□□□□□ -2.34
ZCCHC4Q9H5U6 RN7SL793P-201ENST00000583259 296 ntBASIC0.45□□□□□ -2.34
ZCCHC4Q9H5U6 SNORD114-26-201ENST00000363543 72 ntBASIC0.44□□□□□ -2.34
ZCCHC4Q9H5U6 RNA5SP62-201ENST00000363457 110 ntBASIC0.43□□□□□ -2.34
ZCCHC4Q9H5U6 Y_RNA.321-201ENST00000365149 102 ntBASIC0.43□□□□□ -2.34
ZCCHC4Q9H5U6 MIR4280-201ENST00000582178 76 ntBASIC0.43□□□□□ -2.34
ZCCHC4Q9H5U6 AC138207.3-201ENST00000585289 166 ntBASIC0.43□□□□□ -2.34
ZCCHC4Q9H5U6 SNORD114-23-201ENST00000363536 72 ntBASIC0.42□□□□□ -2.34
ZCCHC4Q9H5U6 MIR548Q-201ENST00000408404 100 ntBASIC0.42□□□□□ -2.34
ZCCHC4Q9H5U6 MIR148A-201ENST00000362215 68 ntBASIC0.41□□□□□ -2.34
ZCCHC4Q9H5U6 RNA5SP325-201ENST00000363756 130 ntBASIC0.41□□□□□ -2.34
ZCCHC4Q9H5U6 Y_RNA.206-201ENST00000364136 102 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms