Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC006160.2-201ENST00000637708 154 ntBASIC-1.05□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.06□□□□□ -2.58
RNF41Q9H4P4 AL500527.2-201ENST00000454105 95 ntBASIC-1.06□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.07□□□□□ -2.58
RNF41Q9H4P4 RNU6-168P-201ENST00000516189 101 ntBASIC-1.07□□□□□ -2.58
RNF41Q9H4P4 RNU6-49P-201ENST00000384256 107 ntBASIC-1.08□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.08□□□□□ -2.58
RNF41Q9H4P4 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.08□□□□□ -2.58
RNF41Q9H4P4 RNA5SP89-201ENST00000410300 108 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 HAR1A.1-201ENST00000459583 118 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 RNA5SP476-201ENST00000516613 103 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 RNU6-807P-201ENST00000516805 107 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 MIR548AI-201ENST00000579940 88 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 MIR382-201ENST00000637119 76 ntBASIC-1.09□□□□□ -2.58
RNF41Q9H4P4 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.1□□□□□ -2.59
RNF41Q9H4P4 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.1□□□□□ -2.59
RNF41Q9H4P4 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.11□□□□□ -2.59
RNF41Q9H4P4 SNORA8.1-201ENST00000384250 140 ntBASIC-1.11□□□□□ -2.59
RNF41Q9H4P4 U2.22-201ENST00000636441 106 ntBASIC-1.11□□□□□ -2.59
RNF41Q9H4P4 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.12□□□□□ -2.59
RNF41Q9H4P4 SNORA26.4-201ENST00000391188 123 ntBASIC-1.12□□□□□ -2.59
RNF41Q9H4P4 SNORD115-33-201ENST00000363723 82 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 RNU6-246P-201ENST00000384702 107 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 SNORD63.1-201ENST00000516178 80 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 RNU6-982P-201ENST00000516216 102 ntBASIC-1.13□□□□□ -2.59
RNF41Q9H4P4 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 SNORD45.1-201ENST00000363181 77 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 SNORD115-22-201ENST00000364456 82 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 RNU6-604P-201ENST00000390917 100 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 RNU7-174P-201ENST00000516248 59 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 MIR1297-201ENST00000637311 77 ntBASIC-1.14□□□□□ -2.59
RNF41Q9H4P4 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.15□□□□□ -2.59
RNF41Q9H4P4 RNU6-979P-201ENST00000383896 107 ntBASIC-1.15□□□□□ -2.59
RNF41Q9H4P4 RNU6-24P-201ENST00000384440 107 ntBASIC-1.15□□□□□ -2.59
RNF41Q9H4P4 MIR409-201ENST00000362237 79 ntBASIC-1.16□□□□□ -2.6
RNF41Q9H4P4 MIR378F-201ENST00000578143 78 ntBASIC-1.16□□□□□ -2.6
RNF41Q9H4P4 MIR5588-201ENST00000581890 63 ntBASIC-1.16□□□□□ -2.6
RNF41Q9H4P4 MIR4484-201ENST00000582855 83 ntBASIC-1.16□□□□□ -2.6
RNF41Q9H4P4 RNU6-315P-201ENST00000362666 107 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 SCARNA18B-201ENST00000458806 135 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 MIR3115-201ENST00000577915 68 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 IGLL4P-201ENST00000614590 133 ntBASIC-1.17□□□□□ -2.6
RNF41Q9H4P4 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 RNY1P1-201ENST00000364372 112 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 RNA5SP192-201ENST00000364404 120 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 RNU6-153P-201ENST00000364422 104 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 MIR4320-201ENST00000636981 65 ntBASIC-1.18□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.19□□□□□ -2.6
RNF41Q9H4P4 RNA5SP266-201ENST00000410273 108 ntBASIC-1.19□□□□□ -2.6
RNF41Q9H4P4 U7.5-201ENST00000517224 61 ntBASIC-1.19□□□□□ -2.6
RNF41Q9H4P4 MIR4499-201ENST00000584834 69 ntBASIC-1.19□□□□□ -2.6
RNF41Q9H4P4 MIR548C-201ENST00000384815 97 ntBASIC-1.2□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 RNU6-587P-201ENST00000391282 106 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 RNU7-171P-201ENST00000459581 62 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 RNU6-732P-201ENST00000516033 103 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.21□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 SNORD19-201ENST00000391191 68 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 RNU6-380P-201ENST00000410207 107 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 snoU83B.1-201ENST00000517136 88 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 MIR3165-201ENST00000579874 75 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 uc_338.19-201ENST00000616808 99 ntBASIC-1.22□□□□□ -2.6
RNF41Q9H4P4 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.23□□□□□ -2.61
RNF41Q9H4P4 RNY4P30-201ENST00000410216 95 ntBASIC-1.23□□□□□ -2.61
RNF41Q9H4P4 RNU7-88P-201ENST00000458752 63 ntBASIC-1.23□□□□□ -2.61
RNF41Q9H4P4 MIR664A-201ENST00000626086 82 ntBASIC-1.23□□□□□ -2.61
RNF41Q9H4P4 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 AL353691.2-201ENST00000443795 59 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 AP002795.1-201ENST00000534879 84 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 U4.4-201ENST00000620626 117 ntBASIC-1.24□□□□□ -2.61
RNF41Q9H4P4 RNU6-698P-201ENST00000363523 107 ntBASIC-1.25□□□□□ -2.61
RNF41Q9H4P4 RNU6-34P-201ENST00000364874 107 ntBASIC-1.25□□□□□ -2.61
RNF41Q9H4P4 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.25□□□□□ -2.61
RNF41Q9H4P4 SNORD113.1-201ENST00000363280 73 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 MIR29B1-201ENST00000385015 81 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 MIR8053-201ENST00000613344 75 ntBASIC-1.26□□□□□ -2.61
RNF41Q9H4P4 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 RNU6-458P-201ENST00000384179 107 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 U6.58-201ENST00000613107 107 ntBASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.27□□□□□ -2.61
RNF41Q9H4P4 RNA5SP26-201ENST00000362406 119 ntBASIC-1.28□□□□□ -2.61
RNF41Q9H4P4 MIR4712-201ENST00000583750 82 ntBASIC-1.28□□□□□ -2.61
RNF41Q9H4P4 MIR548V-201ENST00000584165 80 ntBASIC-1.28□□□□□ -2.61
RNF41Q9H4P4 MIR1245B-201ENST00000636115 69 ntBASIC-1.28□□□□□ -2.61
RNF41Q9H4P4 SNORD45A-201ENST00000384512 84 ntBASIC-1.29□□□□□ -2.62
RNF41Q9H4P4 MTND4LP1-201ENST00000446263 157 ntBASIC-1.29□□□□□ -2.62
RNF41Q9H4P4 MIR4306-201ENST00000583390 91 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 254.2 ms