Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 SNORD30.1-201ENST00000391309 70 ntBASIC-0.1□□□□□ -2.43
MMP28Q9H239 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.1□□□□□ -2.43
MMP28Q9H239 MIR4432-201ENST00000581823 84 ntBASIC-0.1□□□□□ -2.43
MMP28Q9H239 MIR548V-201ENST00000584165 80 ntBASIC-0.1□□□□□ -2.43
MMP28Q9H239 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
MMP28Q9H239 RNU6-973P-201ENST00000364690 107 ntBASIC-0.11□□□□□ -2.43
MMP28Q9H239 RNU6-901P-201ENST00000384593 106 ntBASIC-0.12□□□□□ -2.43
MMP28Q9H239 AL445193.1-201ENST00000441183 141 ntBASIC-0.12□□□□□ -2.43
MMP28Q9H239 AL021921.1-201ENST00000442774 93 ntBASIC-0.12□□□□□ -2.43
MMP28Q9H239 RNU7-174P-201ENST00000516248 59 ntBASIC-0.12□□□□□ -2.43
MMP28Q9H239 MIR5704-201ENST00000584029 77 ntBASIC-0.12□□□□□ -2.43
MMP28Q9H239 AL353803.5-201ENST00000599815 141 ntBASIC-0.12□□□□□ -2.43
MMP28Q9H239 AC096531.1-201ENST00000419107 107 ntBASIC-0.13□□□□□ -2.43
MMP28Q9H239 RNA5SP470-201ENST00000516463 106 ntBASIC-0.13□□□□□ -2.43
MMP28Q9H239 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 RNA5SP215-201ENST00000363440 122 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 RNU6-649P-201ENST00000384463 107 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 MIR517B-201ENST00000385102 67 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 MIR214-201ENST00000385214 110 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 Z95118.1-201ENST00000421372 247 ntBASIC-0.14□□□□□ -2.43
MMP28Q9H239 MIR630-201ENST00000384957 97 ntBASIC-0.15□□□□□ -2.43
MMP28Q9H239 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.15□□□□□ -2.43
MMP28Q9H239 RNU6-630P-201ENST00000391258 106 ntBASIC-0.15□□□□□ -2.43
MMP28Q9H239 RNU7-154P-201ENST00000516194 62 ntBASIC-0.15□□□□□ -2.43
MMP28Q9H239 MIR548AG1-201ENST00000579932 66 ntBASIC-0.15□□□□□ -2.43
MMP28Q9H239 AL590491.3-201ENST00000610731 82 ntBASIC-0.15□□□□□ -2.43
MMP28Q9H239 MIR8068-201ENST00000618032 68 ntBASIC-0.15□□□□□ -2.43
MMP28Q9H239 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.16□□□□□ -2.44
MMP28Q9H239 SNORD4A-201ENST00000459174 72 ntBASIC-0.16□□□□□ -2.44
MMP28Q9H239 AP001180.6-201ENST00000584918 159 ntBASIC-0.16□□□□□ -2.44
MMP28Q9H239 U4.4-201ENST00000620626 117 ntBASIC-0.16□□□□□ -2.44
MMP28Q9H239 RNU6-698P-201ENST00000363523 107 ntBASIC-0.17□□□□□ -2.44
MMP28Q9H239 RNA5SP368-201ENST00000364298 116 ntBASIC-0.17□□□□□ -2.44
MMP28Q9H239 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.17□□□□□ -2.44
MMP28Q9H239 RNU6-34P-201ENST00000364874 107 ntBASIC-0.17□□□□□ -2.44
MMP28Q9H239 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
MMP28Q9H239 RNU6-758P-201ENST00000516292 89 ntBASIC-0.17□□□□□ -2.44
MMP28Q9H239 U6.111-201ENST00000636093 83 ntBASIC-0.17□□□□□ -2.44
MMP28Q9H239 AC114801.3-201ENST00000510231 177 ntBASIC-0.18□□□□□ -2.44
MMP28Q9H239 MIR4464-201ENST00000580818 92 ntBASIC-0.18□□□□□ -2.44
MMP28Q9H239 MIR4280-201ENST00000582178 76 ntBASIC-0.18□□□□□ -2.44
MMP28Q9H239 MIR4263-201ENST00000584745 83 ntBASIC-0.18□□□□□ -2.44
MMP28Q9H239 AC005520.4-201ENST00000604337 90 ntBASIC-0.18□□□□□ -2.44
MMP28Q9H239 MIR3666-201ENST00000607845 111 ntBASIC-0.18□□□□□ -2.44
MMP28Q9H239 MIR6854-201ENST00000614935 69 ntBASIC-0.18□□□□□ -2.44
MMP28Q9H239 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.18□□□□□ -2.44
MMP28Q9H239 SNORA25.4-201ENST00000363666 124 ntBASIC-0.19□□□□□ -2.44
MMP28Q9H239 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.19□□□□□ -2.44
MMP28Q9H239 snoU13.19-201ENST00000459148 104 ntBASIC-0.19□□□□□ -2.44
MMP28Q9H239 RNU6-539P-201ENST00000516665 103 ntBASIC-0.19□□□□□ -2.44
MMP28Q9H239 RNA5SP66-201ENST00000517178 101 ntBASIC-0.19□□□□□ -2.44
MMP28Q9H239 MIR4645-201ENST00000583158 77 ntBASIC-0.19□□□□□ -2.44
MMP28Q9H239 MIR4493-201ENST00000584016 73 ntBASIC-0.19□□□□□ -2.44
MMP28Q9H239 MIR604-201ENST00000384880 94 ntBASIC-0.2□□□□□ -2.44
MMP28Q9H239 AC114755.3-201ENST00000481111 251 ntBASIC-0.2□□□□□ -2.44
MMP28Q9H239 SNORD38.3-201ENST00000516599 73 ntBASIC-0.2□□□□□ -2.44
MMP28Q9H239 MIR6888-201ENST00000621977 67 ntBASIC-0.2□□□□□ -2.44
MMP28Q9H239 MIR4788-201ENST00000639104 80 ntBASIC-0.2□□□□□ -2.44
MMP28Q9H239 SNORD114-28-201ENST00000363610 72 ntBASIC-0.21□□□□□ -2.44
MMP28Q9H239 SNORA62.4-201ENST00000365504 151 ntBASIC-0.21□□□□□ -2.44
MMP28Q9H239 RNU6-30P-201ENST00000384561 107 ntBASIC-0.21□□□□□ -2.44
MMP28Q9H239 RNA5SP300-201ENST00000391197 107 ntBASIC-0.21□□□□□ -2.44
MMP28Q9H239 RNU6-542P-201ENST00000516405 103 ntBASIC-0.21□□□□□ -2.44
MMP28Q9H239 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.21□□□□□ -2.44
MMP28Q9H239 SNORD114-11-201ENST00000363738 75 ntBASIC-0.22□□□□□ -2.44
MMP28Q9H239 RNU6-800P-201ENST00000384473 103 ntBASIC-0.22□□□□□ -2.44
MMP28Q9H239 RNA5SP25-201ENST00000410815 110 ntBASIC-0.22□□□□□ -2.44
MMP28Q9H239 MIR6851-201ENST00000617060 67 ntBASIC-0.22□□□□□ -2.44
MMP28Q9H239 AL445584.3-201ENST00000617173 78 ntBASIC-0.22□□□□□ -2.44
MMP28Q9H239 AC093726.3-201ENST00000637588 150 ntBASIC-0.22□□□□□ -2.44
MMP28Q9H239 SNORD113-2-201ENST00000391082 72 ntBASIC-0.23□□□□□ -2.45
MMP28Q9H239 AC108676.2-201ENST00000605225 163 ntBASIC-0.23□□□□□ -2.45
MMP28Q9H239 MIR101-1-201ENST00000362265 75 ntBASIC-0.24□□□□□ -2.45
MMP28Q9H239 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.24□□□□□ -2.45
MMP28Q9H239 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.24□□□□□ -2.45
MMP28Q9H239 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
MMP28Q9H239 MIR8064-201ENST00000612863 90 ntBASIC-0.24□□□□□ -2.45
MMP28Q9H239 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.25□□□□□ -2.45
MMP28Q9H239 MIR124-2-201ENST00000385081 109 ntBASIC-0.25□□□□□ -2.45
MMP28Q9H239 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.25□□□□□ -2.45
MMP28Q9H239 RNA5SP169-201ENST00000517268 117 ntBASIC-0.25□□□□□ -2.45
MMP28Q9H239 SNORD114-15-201ENST00000364687 72 ntBASIC-0.26□□□□□ -2.45
MMP28Q9H239 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.26□□□□□ -2.45
MMP28Q9H239 MIR527-201ENST00000385244 85 ntBASIC-0.26□□□□□ -2.45
MMP28Q9H239 RNU6-246P-201ENST00000384702 107 ntBASIC-0.27□□□□□ -2.45
MMP28Q9H239 SNORA41B-201ENST00000384785 128 ntBASIC-0.28□□□□□ -2.45
MMP28Q9H239 RNA5SP451-201ENST00000410588 110 ntBASIC-0.28□□□□□ -2.45
MMP28Q9H239 RNU6-458P-201ENST00000384179 107 ntBASIC-0.29□□□□□ -2.46
MMP28Q9H239 MIR4511-201ENST00000582784 87 ntBASIC-0.29□□□□□ -2.46
MMP28Q9H239 RNU6-92P-201ENST00000605893 104 ntBASIC-0.29□□□□□ -2.46
MMP28Q9H239 U6.58-201ENST00000613107 107 ntBASIC-0.29□□□□□ -2.46
MMP28Q9H239 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.3□□□□□ -2.46
MMP28Q9H239 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.3□□□□□ -2.46
MMP28Q9H239 MIR518B-201ENST00000385127 83 ntBASIC-0.3□□□□□ -2.46
MMP28Q9H239 MIR204-201ENST00000385200 110 ntBASIC-0.3□□□□□ -2.46
MMP28Q9H239 RPS29P8-201ENST00000445109 171 ntBASIC-0.3□□□□□ -2.46
MMP28Q9H239 SNORD22.1-201ENST00000516331 125 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 405.7 ms