Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR4636-201ENST00000582271 80 ntBASIC1.13□□□□□ -2.23
COL25A1Q9BXS0 MIR4723-201ENST00000585070 81 ntBASIC1.12□□□□□ -2.23
COL25A1Q9BXS0 SNORA25.18-201ENST00000607153 114 ntBASIC1.12□□□□□ -2.23
COL25A1Q9BXS0 MIR6857-201ENST00000613267 93 ntBASIC1.12□□□□□ -2.23
COL25A1Q9BXS0 RN7SL660P-201ENST00000614852 299 ntBASIC1.12□□□□□ -2.23
COL25A1Q9BXS0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
COL25A1Q9BXS0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
COL25A1Q9BXS0 SNORD118-201ENST00000363593 134 ntBASIC1.11□□□□□ -2.23
COL25A1Q9BXS0 RNU6-59P-201ENST00000384787 107 ntBASIC1.11□□□□□ -2.23
COL25A1Q9BXS0 MIR501-201ENST00000390204 84 ntBASIC1.11□□□□□ -2.23
COL25A1Q9BXS0 MIR548H4-201ENST00000408689 111 ntBASIC1.11□□□□□ -2.23
COL25A1Q9BXS0 U7.5-201ENST00000517224 61 ntBASIC1.11□□□□□ -2.23
COL25A1Q9BXS0 AL353765.1-201ENST00000605514 183 ntBASIC1.11□□□□□ -2.23
COL25A1Q9BXS0 MTRNR2L9-201ENST00000622562 75 ntBASIC1.11□□□□□ -2.23
COL25A1Q9BXS0 RNU6-1008P-201ENST00000384160 104 ntBASIC1.1□□□□□ -2.23
COL25A1Q9BXS0 ACA64.5-201ENST00000516207 127 ntBASIC1.1□□□□□ -2.23
COL25A1Q9BXS0 AC084368.1-201ENST00000620935 65 ntBASIC1.1□□□□□ -2.23
COL25A1Q9BXS0 Y_RNA.423-201ENST00000384057 113 ntBASIC1.08□□□□□ -2.24
COL25A1Q9BXS0 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
COL25A1Q9BXS0 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
COL25A1Q9BXS0 RNU7-88P-201ENST00000458752 63 ntBASIC1.08□□□□□ -2.24
COL25A1Q9BXS0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.08□□□□□ -2.24
COL25A1Q9BXS0 RNU6-1174P-201ENST00000517278 101 ntBASIC1.08□□□□□ -2.24
COL25A1Q9BXS0 SNORA36.2-201ENST00000384004 127 ntBASIC1.07□□□□□ -2.24
COL25A1Q9BXS0 MIR140-201ENST00000385282 100 ntBASIC1.07□□□□□ -2.24
COL25A1Q9BXS0 MIR4711-201ENST00000578274 70 ntBASIC1.07□□□□□ -2.24
COL25A1Q9BXS0 MIR4464-201ENST00000580818 92 ntBASIC1.07□□□□□ -2.24
COL25A1Q9BXS0 SNORD63.1-201ENST00000516178 80 ntBASIC1.06□□□□□ -2.24
COL25A1Q9BXS0 MIR6755-201ENST00000619993 66 ntBASIC1.06□□□□□ -2.24
COL25A1Q9BXS0 MIR6888-201ENST00000621977 67 ntBASIC1.06□□□□□ -2.24
COL25A1Q9BXS0 MIR876-201ENST00000401147 81 ntBASIC1.05□□□□□ -2.24
COL25A1Q9BXS0 SNORA40.8-201ENST00000411034 126 ntBASIC1.05□□□□□ -2.24
COL25A1Q9BXS0 RNU6-848P-201ENST00000515948 107 ntBASIC1.05□□□□□ -2.24
COL25A1Q9BXS0 RNU6-617P-201ENST00000516147 107 ntBASIC1.05□□□□□ -2.24
COL25A1Q9BXS0 RNU6-473P-201ENST00000516164 107 ntBASIC1.05□□□□□ -2.24
COL25A1Q9BXS0 RNU6-1049P-201ENST00000516414 107 ntBASIC1.05□□□□□ -2.24
COL25A1Q9BXS0 SNORD63.2-201ENST00000516303 64 ntBASIC1.04□□□□□ -2.24
COL25A1Q9BXS0 AP000676.1-201ENST00000533307 52 ntBASIC1.04□□□□□ -2.24
COL25A1Q9BXS0 MIR4698-201ENST00000577795 80 ntBASIC1.04□□□□□ -2.24
COL25A1Q9BXS0 MIR3925-201ENST00000584674 77 ntBASIC1.04□□□□□ -2.24
COL25A1Q9BXS0 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
COL25A1Q9BXS0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
COL25A1Q9BXS0 MIR106A-201ENST00000384870 81 ntBASIC1.03□□□□□ -2.24
COL25A1Q9BXS0 AC068338.1-201ENST00000565567 176 ntBASIC1.03□□□□□ -2.24
COL25A1Q9BXS0 MIR3170-201ENST00000582699 77 ntBASIC1.03□□□□□ -2.24
COL25A1Q9BXS0 AL445584.3-201ENST00000617173 78 ntBASIC1.03□□□□□ -2.24
COL25A1Q9BXS0 snoR1.1-201ENST00000628177 80 ntBASIC1.03□□□□□ -2.24
COL25A1Q9BXS0 MIR6759-201ENST00000638110 65 ntBASIC1.03□□□□□ -2.24
COL25A1Q9BXS0 AC138207.3-201ENST00000585289 166 ntBASIC1.02□□□□□ -2.25
COL25A1Q9BXS0 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
COL25A1Q9BXS0 RNU6-530P-201ENST00000391180 107 ntBASIC1.01□□□□□ -2.25
COL25A1Q9BXS0 RNU4-54P-201ENST00000516428 129 ntBASIC1.01□□□□□ -2.25
COL25A1Q9BXS0 MIR760-201ENST00000390220 80 ntBASIC1□□□□□ -2.25
COL25A1Q9BXS0 Y_RNA.321-201ENST00000365149 102 ntBASIC0.99□□□□□ -2.25
COL25A1Q9BXS0 MIR518A1-201ENST00000385068 85 ntBASIC0.99□□□□□ -2.25
COL25A1Q9BXS0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
COL25A1Q9BXS0 SNORD71-201ENST00000411292 86 ntBASIC0.98□□□□□ -2.25
COL25A1Q9BXS0 RNA5SP128-201ENST00000365305 116 ntBASIC0.97□□□□□ -2.25
COL25A1Q9BXS0 SNORA62.4-201ENST00000365504 151 ntBASIC0.97□□□□□ -2.25
COL25A1Q9BXS0 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
COL25A1Q9BXS0 MIR5589-201ENST00000579442 60 ntBASIC0.97□□□□□ -2.25
COL25A1Q9BXS0 AC104408.1-201ENST00000605241 170 ntBASIC0.97□□□□□ -2.25
COL25A1Q9BXS0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
COL25A1Q9BXS0 RNU6-1326P-201ENST00000391262 107 ntBASIC0.96□□□□□ -2.26
COL25A1Q9BXS0 Y_RNA.613-201ENST00000410726 97 ntBASIC0.96□□□□□ -2.26
COL25A1Q9BXS0 RNU6-894P-201ENST00000517094 105 ntBASIC0.96□□□□□ -2.26
COL25A1Q9BXS0 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
COL25A1Q9BXS0 MIR1468-201ENST00000410600 86 ntBASIC0.95□□□□□ -2.26
COL25A1Q9BXS0 AL391099.1-201ENST00000624635 187 ntBASIC0.95□□□□□ -2.26
COL25A1Q9BXS0 MIR499B-201ENST00000636498 73 ntBASIC0.95□□□□□ -2.26
COL25A1Q9BXS0 RNU7-55P-201ENST00000459426 62 ntBASIC0.94□□□□□ -2.26
COL25A1Q9BXS0 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
COL25A1Q9BXS0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL25A1Q9BXS0 MIR409-201ENST00000362237 79 ntBASIC0.93□□□□□ -2.26
COL25A1Q9BXS0 RNA5SP98-201ENST00000363158 137 ntBASIC0.93□□□□□ -2.26
COL25A1Q9BXS0 Y_RNA.345-201ENST00000365384 92 ntBASIC0.93□□□□□ -2.26
COL25A1Q9BXS0 RNU6-1111P-201ENST00000391118 107 ntBASIC0.93□□□□□ -2.26
COL25A1Q9BXS0 RNA5SP25-201ENST00000410815 110 ntBASIC0.93□□□□□ -2.26
COL25A1Q9BXS0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.93□□□□□ -2.26
COL25A1Q9BXS0 RNU6-1238P-201ENST00000517215 102 ntBASIC0.93□□□□□ -2.26
COL25A1Q9BXS0 uc_338.36-201ENST00000622331 158 ntBASIC0.93□□□□□ -2.26
COL25A1Q9BXS0 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
COL25A1Q9BXS0 RNU6-258P-201ENST00000390884 101 ntBASIC0.92□□□□□ -2.26
COL25A1Q9BXS0 MIR4802-201ENST00000581881 80 ntBASIC0.92□□□□□ -2.26
COL25A1Q9BXS0 Y_RNA.206-201ENST00000364136 102 ntBASIC0.91□□□□□ -2.26
COL25A1Q9BXS0 RNU6-973P-201ENST00000364690 107 ntBASIC0.91□□□□□ -2.26
COL25A1Q9BXS0 MIR508-201ENST00000384857 115 ntBASIC0.91□□□□□ -2.26
COL25A1Q9BXS0 MIR1285-1-201ENST00000408593 84 ntBASIC0.91□□□□□ -2.26
COL25A1Q9BXS0 RNA5SP266-201ENST00000410273 108 ntBASIC0.91□□□□□ -2.26
COL25A1Q9BXS0 RNA5SP67-201ENST00000516422 131 ntBASIC0.91□□□□□ -2.26
COL25A1Q9BXS0 MIR6507-201ENST00000613630 70 ntBASIC0.91□□□□□ -2.26
COL25A1Q9BXS0 RNA5SP347-201ENST00000362445 119 ntBASIC0.9□□□□□ -2.27
COL25A1Q9BXS0 Y_RNA.457-201ENST00000384237 111 ntBASIC0.9□□□□□ -2.27
COL25A1Q9BXS0 RNU6-1133P-201ENST00000410963 100 ntBASIC0.9□□□□□ -2.27
COL25A1Q9BXS0 RNU6-732P-201ENST00000516033 103 ntBASIC0.9□□□□□ -2.27
COL25A1Q9BXS0 MIR6835-201ENST00000621552 64 ntBASIC0.9□□□□□ -2.27
COL25A1Q9BXS0 MIR4317-201ENST00000637586 65 ntBASIC0.9□□□□□ -2.27
COL25A1Q9BXS0 RNA5SP63-201ENST00000391225 112 ntBASIC0.89□□□□□ -2.27
COL25A1Q9BXS0 AC096531.1-201ENST00000419107 107 ntBASIC0.89□□□□□ -2.27
COL25A1Q9BXS0 RNU6-1047P-201ENST00000364418 107 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 206.2 ms