Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SNORD95.1-201ENST00000364099 68 ntBASIC-0.57□□□□□ -2.5
TRAIPQ9BWF2 SNORA62.4-201ENST00000365504 151 ntBASIC-0.57□□□□□ -2.5
TRAIPQ9BWF2 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.57□□□□□ -2.5
TRAIPQ9BWF2 RNU6-279P-201ENST00000391297 101 ntBASIC-0.57□□□□□ -2.5
TRAIPQ9BWF2 AL021921.1-201ENST00000442774 93 ntBASIC-0.57□□□□□ -2.5
TRAIPQ9BWF2 AC090617.8-201ENST00000623339 167 ntBASIC-0.57□□□□□ -2.5
TRAIPQ9BWF2 RNU6-411P-201ENST00000384451 107 ntBASIC-0.58□□□□□ -2.5
TRAIPQ9BWF2 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.58□□□□□ -2.5
TRAIPQ9BWF2 SNORD115-22-201ENST00000364456 82 ntBASIC-0.59□□□□□ -2.5
TRAIPQ9BWF2 RNU6-587P-201ENST00000391282 106 ntBASIC-0.59□□□□□ -2.5
TRAIPQ9BWF2 RNU6-284P-201ENST00000411105 106 ntBASIC-0.59□□□□□ -2.5
TRAIPQ9BWF2 AC114755.3-201ENST00000481111 251 ntBASIC-0.59□□□□□ -2.5
TRAIPQ9BWF2 SNORD56B-201ENST00000384713 71 ntBASIC-0.6□□□□□ -2.51
TRAIPQ9BWF2 RNU6-668P-201ENST00000364180 107 ntBASIC-0.61□□□□□ -2.51
TRAIPQ9BWF2 SNORD115-23-201ENST00000364461 82 ntBASIC-0.61□□□□□ -2.51
TRAIPQ9BWF2 MIR204-201ENST00000385200 110 ntBASIC-0.61□□□□□ -2.51
TRAIPQ9BWF2 RPS29P8-201ENST00000445109 171 ntBASIC-0.61□□□□□ -2.51
TRAIPQ9BWF2 RNU6-982P-201ENST00000516216 102 ntBASIC-0.61□□□□□ -2.51
TRAIPQ9BWF2 RNU6-881P-201ENST00000516813 102 ntBASIC-0.61□□□□□ -2.51
TRAIPQ9BWF2 SNORD113.1-201ENST00000363280 73 ntBASIC-0.62□□□□□ -2.51
TRAIPQ9BWF2 MIR224-201ENST00000384889 81 ntBASIC-0.62□□□□□ -2.51
TRAIPQ9BWF2 RNU6-518P-201ENST00000516056 96 ntBASIC-0.62□□□□□ -2.51
TRAIPQ9BWF2 MIR3134-201ENST00000579433 74 ntBASIC-0.62□□□□□ -2.51
TRAIPQ9BWF2 MIR6854-201ENST00000614935 69 ntBASIC-0.62□□□□□ -2.51
TRAIPQ9BWF2 MIR548AZ-201ENST00000616567 95 ntBASIC-0.62□□□□□ -2.51
TRAIPQ9BWF2 SNORD45A-201ENST00000384512 84 ntBASIC-0.63□□□□□ -2.51
TRAIPQ9BWF2 RNU6-30P-201ENST00000384561 107 ntBASIC-0.63□□□□□ -2.51
TRAIPQ9BWF2 snoU13.19-201ENST00000459148 104 ntBASIC-0.63□□□□□ -2.51
TRAIPQ9BWF2 AL353803.5-201ENST00000599815 141 ntBASIC-0.63□□□□□ -2.51
TRAIPQ9BWF2 SNORD114-15-201ENST00000364687 72 ntBASIC-0.64□□□□□ -2.51
TRAIPQ9BWF2 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.64□□□□□ -2.51
TRAIPQ9BWF2 RNU7-154P-201ENST00000516194 62 ntBASIC-0.65□□□□□ -2.51
TRAIPQ9BWF2 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.66□□□□□ -2.52
TRAIPQ9BWF2 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.66□□□□□ -2.52
TRAIPQ9BWF2 RNA5SP169-201ENST00000517268 117 ntBASIC-0.66□□□□□ -2.52
TRAIPQ9BWF2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.66□□□□□ -2.52
TRAIPQ9BWF2 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.67□□□□□ -2.52
TRAIPQ9BWF2 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.68□□□□□ -2.52
TRAIPQ9BWF2 U2.7-201ENST00000619197 100 ntBASIC-0.68□□□□□ -2.52
TRAIPQ9BWF2 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.69□□□□□ -2.52
TRAIPQ9BWF2 RNA5SP225-201ENST00000410874 135 ntBASIC-0.69□□□□□ -2.52
TRAIPQ9BWF2 MIR4280-201ENST00000582178 76 ntBASIC-0.69□□□□□ -2.52
TRAIPQ9BWF2 MIR5704-201ENST00000584029 77 ntBASIC-0.69□□□□□ -2.52
TRAIPQ9BWF2 MIR6851-201ENST00000617060 67 ntBASIC-0.7□□□□□ -2.52
TRAIPQ9BWF2 SNORD114-14-201ENST00000362723 75 ntBASIC-0.71□□□□□ -2.52
TRAIPQ9BWF2 SNORA3B-201ENST00000391305 131 ntBASIC-0.71□□□□□ -2.52
TRAIPQ9BWF2 MIR519A2-201ENST00000384990 87 ntBASIC-0.72□□□□□ -2.52
TRAIPQ9BWF2 MIR517B-201ENST00000385102 67 ntBASIC-0.72□□□□□ -2.52
TRAIPQ9BWF2 RNU4-63P-201ENST00000411313 118 ntBASIC-0.72□□□□□ -2.52
TRAIPQ9BWF2 SNORA13-201ENST00000458790 133 ntBASIC-0.72□□□□□ -2.52
TRAIPQ9BWF2 MIR4436A-201ENST00000585278 85 ntBASIC-0.72□□□□□ -2.52
TRAIPQ9BWF2 MT-TQ-201ENST00000387372 72 ntBASIC-0.73□□□□□ -2.53
TRAIPQ9BWF2 MIR4662A-201ENST00000637499 67 ntBASIC-0.73□□□□□ -2.53
TRAIPQ9BWF2 SNORD75.1-201ENST00000408373 60 ntBASIC-0.74□□□□□ -2.53
TRAIPQ9BWF2 SNORD38.3-201ENST00000516599 73 ntBASIC-0.74□□□□□ -2.53
TRAIPQ9BWF2 RNA5SP215-201ENST00000363440 122 ntBASIC-0.75□□□□□ -2.53
TRAIPQ9BWF2 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.75□□□□□ -2.53
TRAIPQ9BWF2 MIR518B-201ENST00000385127 83 ntBASIC-0.75□□□□□ -2.53
TRAIPQ9BWF2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.75□□□□□ -2.53
TRAIPQ9BWF2 RNU6-871P-201ENST00000516122 100 ntBASIC-0.75□□□□□ -2.53
TRAIPQ9BWF2 RNU6-687P-201ENST00000516443 89 ntBASIC-0.75□□□□□ -2.53
TRAIPQ9BWF2 MIR548AX-201ENST00000580117 73 ntBASIC-0.75□□□□□ -2.53
TRAIPQ9BWF2 SNORD74.6-201ENST00000364796 70 ntBASIC-0.79□□□□□ -2.54
TRAIPQ9BWF2 AC021146.6-201ENST00000514659 117 ntBASIC-0.79□□□□□ -2.54
TRAIPQ9BWF2 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.79□□□□□ -2.54
TRAIPQ9BWF2 MIR548V-201ENST00000584165 80 ntBASIC-0.81□□□□□ -2.54
TRAIPQ9BWF2 MIR8068-201ENST00000618032 68 ntBASIC-0.83□□□□□ -2.54
TRAIPQ9BWF2 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.84□□□□□ -2.54
TRAIPQ9BWF2 SNORD115-31-201ENST00000365318 82 ntBASIC-0.84□□□□□ -2.54
TRAIPQ9BWF2 RNU6-634P-201ENST00000459134 106 ntBASIC-0.84□□□□□ -2.54
TRAIPQ9BWF2 RNU7-174P-201ENST00000516248 59 ntBASIC-0.84□□□□□ -2.54
TRAIPQ9BWF2 RNA5SP67-201ENST00000516422 131 ntBASIC-0.84□□□□□ -2.54
TRAIPQ9BWF2 RNU6-698P-201ENST00000363523 107 ntBASIC-0.85□□□□□ -2.55
TRAIPQ9BWF2 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.85□□□□□ -2.55
TRAIPQ9BWF2 RNU6-34P-201ENST00000364874 107 ntBASIC-0.85□□□□□ -2.55
TRAIPQ9BWF2 MIR124-2-201ENST00000385081 109 ntBASIC-0.85□□□□□ -2.55
TRAIPQ9BWF2 MIR889-201ENST00000401280 79 ntBASIC-0.85□□□□□ -2.55
TRAIPQ9BWF2 RNU6-924P-201ENST00000362926 108 ntBASIC-0.86□□□□□ -2.55
TRAIPQ9BWF2 RNU6-721P-201ENST00000410155 105 ntBASIC-0.86□□□□□ -2.55
TRAIPQ9BWF2 MIR3179-1-201ENST00000578940 84 ntBASIC-0.86□□□□□ -2.55
TRAIPQ9BWF2 MIR3179-2-201ENST00000579107 84 ntBASIC-0.86□□□□□ -2.55
TRAIPQ9BWF2 MIR3179-3-201ENST00000579566 84 ntBASIC-0.86□□□□□ -2.55
TRAIPQ9BWF2 MIR3179-4-201ENST00000617599 84 ntBASIC-0.86□□□□□ -2.55
TRAIPQ9BWF2 MIR409-201ENST00000362237 79 ntBASIC-0.87□□□□□ -2.55
TRAIPQ9BWF2 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.87□□□□□ -2.55
TRAIPQ9BWF2 SNORD113-2-201ENST00000391082 72 ntBASIC-0.87□□□□□ -2.55
TRAIPQ9BWF2 SNORD18.2-201ENST00000459604 70 ntBASIC-0.87□□□□□ -2.55
TRAIPQ9BWF2 SNORD22.1-201ENST00000516331 125 ntBASIC-0.87□□□□□ -2.55
TRAIPQ9BWF2 MIR429-201ENST00000362106 83 ntBASIC-0.89□□□□□ -2.55
TRAIPQ9BWF2 RNU6-776P-201ENST00000364403 104 ntBASIC-0.89□□□□□ -2.55
TRAIPQ9BWF2 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.89□□□□□ -2.55
TRAIPQ9BWF2 AL445584.3-201ENST00000617173 78 ntBASIC-0.9□□□□□ -2.55
TRAIPQ9BWF2 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.91□□□□□ -2.56
TRAIPQ9BWF2 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.91□□□□□ -2.56
TRAIPQ9BWF2 MIR6888-201ENST00000621977 67 ntBASIC-0.91□□□□□ -2.56
TRAIPQ9BWF2 RNU6-663P-201ENST00000391105 106 ntBASIC-0.92□□□□□ -2.56
TRAIPQ9BWF2 SNORD30.1-201ENST00000391309 70 ntBASIC-0.93□□□□□ -2.56
TRAIPQ9BWF2 AP000533.3-201ENST00000447704 118 ntBASIC-0.93□□□□□ -2.56
TRAIPQ9BWF2 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.94□□□□□ -2.56
TRAIPQ9BWF2 MIR3681-201ENST00000580089 72 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms