Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MIR4499-201ENST00000584834 69 ntBASIC-1.04□□□□□ -2.58
HDHD3Q9BSH5 AC006160.2-201ENST00000637708 154 ntBASIC-1.04□□□□□ -2.58
HDHD3Q9BSH5 SNORD83B-201ENST00000386745 93 ntBASIC-1.05□□□□□ -2.58
HDHD3Q9BSH5 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.05□□□□□ -2.58
HDHD3Q9BSH5 RNU6-10P-201ENST00000384036 107 ntBASIC-1.06□□□□□ -2.58
HDHD3Q9BSH5 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.06□□□□□ -2.58
HDHD3Q9BSH5 MIR587-201ENST00000384845 96 ntBASIC-1.06□□□□□ -2.58
HDHD3Q9BSH5 RNU6-129P-201ENST00000391022 107 ntBASIC-1.06□□□□□ -2.58
HDHD3Q9BSH5 SNORD57-201ENST00000448188 72 ntBASIC-1.06□□□□□ -2.58
HDHD3Q9BSH5 RNU7-174P-201ENST00000516248 59 ntBASIC-1.06□□□□□ -2.58
HDHD3Q9BSH5 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.07□□□□□ -2.58
HDHD3Q9BSH5 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.07□□□□□ -2.58
HDHD3Q9BSH5 SNORA8.1-201ENST00000384250 140 ntBASIC-1.07□□□□□ -2.58
HDHD3Q9BSH5 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.07□□□□□ -2.58
HDHD3Q9BSH5 RNU6-789P-201ENST00000517105 102 ntBASIC-1.07□□□□□ -2.58
HDHD3Q9BSH5 RNY1P9-201ENST00000532431 109 ntBASIC-1.07□□□□□ -2.58
HDHD3Q9BSH5 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.08□□□□□ -2.58
HDHD3Q9BSH5 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.08□□□□□ -2.58
HDHD3Q9BSH5 MIR29B1-201ENST00000385015 81 ntBASIC-1.08□□□□□ -2.58
HDHD3Q9BSH5 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.08□□□□□ -2.58
HDHD3Q9BSH5 uc_338.19-201ENST00000616808 99 ntBASIC-1.08□□□□□ -2.58
HDHD3Q9BSH5 RNU6-604P-201ENST00000390917 100 ntBASIC-1.09□□□□□ -2.58
HDHD3Q9BSH5 RNU6-732P-201ENST00000516033 103 ntBASIC-1.09□□□□□ -2.58
HDHD3Q9BSH5 RNU6-982P-201ENST00000516216 102 ntBASIC-1.09□□□□□ -2.58
HDHD3Q9BSH5 RNU6-44P-201ENST00000384045 107 ntBASIC-1.1□□□□□ -2.59
HDHD3Q9BSH5 HAR1A.1-201ENST00000459583 118 ntBASIC-1.1□□□□□ -2.59
HDHD3Q9BSH5 RNA5SP476-201ENST00000516613 103 ntBASIC-1.1□□□□□ -2.59
HDHD3Q9BSH5 U7.5-201ENST00000517224 61 ntBASIC-1.1□□□□□ -2.59
HDHD3Q9BSH5 RNU6-49P-201ENST00000384256 107 ntBASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 SNORD19-201ENST00000391191 68 ntBASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 snoU83B.1-201ENST00000517136 88 ntBASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 MIR1297-201ENST00000637311 77 ntBASIC-1.11□□□□□ -2.59
HDHD3Q9BSH5 SNORD45.1-201ENST00000363181 77 ntBASIC-1.12□□□□□ -2.59
HDHD3Q9BSH5 RNU6-587P-201ENST00000391282 106 ntBASIC-1.12□□□□□ -2.59
HDHD3Q9BSH5 AP002795.1-201ENST00000534879 84 ntBASIC-1.12□□□□□ -2.59
HDHD3Q9BSH5 RNA5SP26-201ENST00000362406 119 ntBASIC-1.13□□□□□ -2.59
HDHD3Q9BSH5 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.13□□□□□ -2.59
HDHD3Q9BSH5 MIR6818-201ENST00000621576 65 ntBASIC-1.13□□□□□ -2.59
HDHD3Q9BSH5 RNU6-315P-201ENST00000362666 107 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 RNU6-979P-201ENST00000383896 107 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 RNA5SP89-201ENST00000410300 108 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 AL353691.2-201ENST00000443795 59 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 RNU6-168P-201ENST00000516189 101 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 U4.4-201ENST00000620626 117 ntBASIC-1.14□□□□□ -2.59
HDHD3Q9BSH5 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.15□□□□□ -2.59
HDHD3Q9BSH5 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.15□□□□□ -2.59
HDHD3Q9BSH5 RNU7-88P-201ENST00000458752 63 ntBASIC-1.15□□□□□ -2.59
HDHD3Q9BSH5 MIR5588-201ENST00000581890 63 ntBASIC-1.15□□□□□ -2.59
HDHD3Q9BSH5 MIR4484-201ENST00000582855 83 ntBASIC-1.15□□□□□ -2.59
HDHD3Q9BSH5 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.16□□□□□ -2.6
HDHD3Q9BSH5 RNU6-24P-201ENST00000384440 107 ntBASIC-1.16□□□□□ -2.6
HDHD3Q9BSH5 RNU7-134P-201ENST00000458997 64 ntBASIC-1.16□□□□□ -2.6
HDHD3Q9BSH5 MIR409-201ENST00000362237 79 ntBASIC-1.17□□□□□ -2.6
HDHD3Q9BSH5 RNU6-698P-201ENST00000363523 107 ntBASIC-1.17□□□□□ -2.6
HDHD3Q9BSH5 RNU6-34P-201ENST00000364874 107 ntBASIC-1.17□□□□□ -2.6
HDHD3Q9BSH5 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.17□□□□□ -2.6
HDHD3Q9BSH5 RNU6-458P-201ENST00000384179 107 ntBASIC-1.17□□□□□ -2.6
HDHD3Q9BSH5 U6.58-201ENST00000613107 107 ntBASIC-1.17□□□□□ -2.6
HDHD3Q9BSH5 MIR4320-201ENST00000636981 65 ntBASIC-1.17□□□□□ -2.6
HDHD3Q9BSH5 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.18□□□□□ -2.6
HDHD3Q9BSH5 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.18□□□□□ -2.6
HDHD3Q9BSH5 MIR548C-201ENST00000384815 97 ntBASIC-1.18□□□□□ -2.6
HDHD3Q9BSH5 MIR378F-201ENST00000578143 78 ntBASIC-1.18□□□□□ -2.6
HDHD3Q9BSH5 RNA5SP192-201ENST00000364404 120 ntBASIC-1.19□□□□□ -2.6
HDHD3Q9BSH5 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.19□□□□□ -2.6
HDHD3Q9BSH5 RNU4-61P-201ENST00000411243 107 ntBASIC-1.19□□□□□ -2.6
HDHD3Q9BSH5 RNU7-171P-201ENST00000459581 62 ntBASIC-1.19□□□□□ -2.6
HDHD3Q9BSH5 MIR3115-201ENST00000577915 68 ntBASIC-1.19□□□□□ -2.6
HDHD3Q9BSH5 SNORD113.1-201ENST00000363280 73 ntBASIC-1.2□□□□□ -2.6
HDHD3Q9BSH5 RNU6-153P-201ENST00000364422 104 ntBASIC-1.2□□□□□ -2.6
HDHD3Q9BSH5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
HDHD3Q9BSH5 RNA5SP266-201ENST00000410273 108 ntBASIC-1.2□□□□□ -2.6
HDHD3Q9BSH5 MIR548V-201ENST00000584165 80 ntBASIC-1.2□□□□□ -2.6
HDHD3Q9BSH5 MIR8053-201ENST00000613344 75 ntBASIC-1.2□□□□□ -2.6
HDHD3Q9BSH5 MIR664A-201ENST00000626086 82 ntBASIC-1.2□□□□□ -2.6
HDHD3Q9BSH5 MIR5683-201ENST00000636514 76 ntBASIC-1.2□□□□□ -2.6
HDHD3Q9BSH5 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.21□□□□□ -2.6
HDHD3Q9BSH5 RNY1P1-201ENST00000364372 112 ntBASIC-1.21□□□□□ -2.6
HDHD3Q9BSH5 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.22□□□□□ -2.6
HDHD3Q9BSH5 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.22□□□□□ -2.6
HDHD3Q9BSH5 IGLL4P-201ENST00000614590 133 ntBASIC-1.22□□□□□ -2.6
HDHD3Q9BSH5 RNA5SP215-201ENST00000363440 122 ntBASIC-1.23□□□□□ -2.61
HDHD3Q9BSH5 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.23□□□□□ -2.61
HDHD3Q9BSH5 RNU6-696P-201ENST00000390834 107 ntBASIC-1.23□□□□□ -2.61
HDHD3Q9BSH5 RNU6-380P-201ENST00000410207 107 ntBASIC-1.23□□□□□ -2.61
HDHD3Q9BSH5 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.23□□□□□ -2.61
HDHD3Q9BSH5 MIR548AI-201ENST00000579940 88 ntBASIC-1.23□□□□□ -2.61
HDHD3Q9BSH5 U2.22-201ENST00000636441 106 ntBASIC-1.23□□□□□ -2.61
HDHD3Q9BSH5 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.24□□□□□ -2.61
HDHD3Q9BSH5 SNORD45A-201ENST00000384512 84 ntBASIC-1.24□□□□□ -2.61
HDHD3Q9BSH5 MTND4LP1-201ENST00000446263 157 ntBASIC-1.24□□□□□ -2.61
HDHD3Q9BSH5 MIR4306-201ENST00000583390 91 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 243.1 ms