Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 MIR6844-201ENST00000637122 62 ntBASIC-6.1□□□□□ -3.39
VPS13AQ96RL7 RNU7-63P-201ENST00000459054 62 ntBASIC-6.1□□□□□ -3.39
VPS13AQ96RL7 RNU6-787P-201ENST00000384032 107 ntBASIC-6.11□□□□□ -3.39
VPS13AQ96RL7 RNU7-4P-201ENST00000516961 62 ntBASIC-6.11□□□□□ -3.39
VPS13AQ96RL7 Y_RNA.272-201ENST00000364696 102 ntBASIC-6.11□□□□□ -3.39
VPS13AQ96RL7 RNU6-1158P-201ENST00000391167 107 ntBASIC-6.12□□□□□ -3.39
VPS13AQ96RL7 MIR4668-201ENST00000582284 70 ntBASIC-6.13□□□□□ -3.39
VPS13AQ96RL7 RNU5E-5P-201ENST00000365379 116 ntBASIC-6.14□□□□□ -3.39
VPS13AQ96RL7 RNU6-770P-201ENST00000363929 105 ntBASIC-6.14□□□□□ -3.39
VPS13AQ96RL7 Y_RNA.387-201ENST00000383918 102 ntBASIC-6.14□□□□□ -3.39
VPS13AQ96RL7 U8.20-201ENST00000459445 131 ntBASIC-6.14□□□□□ -3.39
VPS13AQ96RL7 MIR4679-2-201ENST00000578358 77 ntBASIC-6.14□□□□□ -3.39
VPS13AQ96RL7 AL035470.1-201ENST00000622571 220 ntBASIC-6.14□□□□□ -3.39
VPS13AQ96RL7 RNU6-633P-201ENST00000362612 103 ntBASIC-6.15□□□□□ -3.39
VPS13AQ96RL7 Y_RNA.586-201ENST00000391146 98 ntBASIC-6.15□□□□□ -3.39
VPS13AQ96RL7 RNU6-894P-201ENST00000517094 105 ntBASIC-6.15□□□□□ -3.39
VPS13AQ96RL7 AC130289.1-201ENST00000577321 73 ntBASIC-6.15□□□□□ -3.39
VPS13AQ96RL7 RNU6-1091P-201ENST00000363945 107 ntBASIC-6.16□□□□□ -3.39
VPS13AQ96RL7 MTATP8P2-201ENST00000435212 202 ntBASIC-6.16□□□□□ -3.39
VPS13AQ96RL7 RNU7-61P-201ENST00000515897 61 ntBASIC-6.16□□□□□ -3.39
VPS13AQ96RL7 AL160413.1-201ENST00000622780 310 ntBASIC-6.16□□□□□ -3.39
VPS13AQ96RL7 RNU6-699P-201ENST00000517081 110 ntBASIC-6.17□□□□□ -3.4
VPS13AQ96RL7 MIR8062-201ENST00000621515 85 ntBASIC-6.18□□□□□ -3.4
VPS13AQ96RL7 Y_RNA.379-201ENST00000365653 102 ntBASIC-6.18□□□□□ -3.4
VPS13AQ96RL7 RNU6-1312P-201ENST00000362425 108 ntBASIC-6.18□□□□□ -3.4
VPS13AQ96RL7 RNU6-294P-201ENST00000364999 102 ntBASIC-6.18□□□□□ -3.4
VPS13AQ96RL7 RNU7-169P-201ENST00000459456 61 ntBASIC-6.19□□□□□ -3.4
VPS13AQ96RL7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-6.2□□□□□ -3.4
VPS13AQ96RL7 RNU6-1314P-201ENST00000517139 104 ntBASIC-6.2□□□□□ -3.4
VPS13AQ96RL7 RNU6-89P-201ENST00000606519 100 ntBASIC-6.2□□□□□ -3.4
VPS13AQ96RL7 AC138305.3-201ENST00000624988 240 ntBASIC-6.2□□□□□ -3.4
VPS13AQ96RL7 RNU6-255P-201ENST00000516957 105 ntBASIC-6.2□□□□□ -3.4
VPS13AQ96RL7 MIR6128-201ENST00000615528 109 ntBASIC-6.2□□□□□ -3.4
VPS13AQ96RL7 RNU6-1107P-201ENST00000364817 104 ntBASIC-6.22□□□□□ -3.4
VPS13AQ96RL7 RNU6-838P-201ENST00000363399 108 ntBASIC-6.23□□□□□ -3.41
VPS13AQ96RL7 RNU6-326P-201ENST00000365480 107 ntBASIC-6.23□□□□□ -3.41
VPS13AQ96RL7 Y_RNA.594-201ENST00000410373 140 ntBASIC-6.23□□□□□ -3.41
VPS13AQ96RL7 AC012414.2-201ENST00000559474 187 ntBASIC-6.23□□□□□ -3.41
VPS13AQ96RL7 DLEU2_2.2-201ENST00000615474 90 ntBASIC-6.23□□□□□ -3.41
VPS13AQ96RL7 RNU6-890P-201ENST00000384121 107 ntBASIC-6.24□□□□□ -3.41
VPS13AQ96RL7 RNU6-574P-201ENST00000384265 107 ntBASIC-6.25□□□□□ -3.41
VPS13AQ96RL7 RNU6-256P-201ENST00000516747 97 ntBASIC-6.25□□□□□ -3.41
VPS13AQ96RL7 RNU6-261P-201ENST00000459506 102 ntBASIC-6.26□□□□□ -3.41
VPS13AQ96RL7 RNU6-1289P-201ENST00000384431 106 ntBASIC-6.26□□□□□ -3.41
VPS13AQ96RL7 RNU6-307P-201ENST00000516743 106 ntBASIC-6.27□□□□□ -3.41
VPS13AQ96RL7 RNU6-1088P-201ENST00000516850 104 ntBASIC-6.27□□□□□ -3.41
VPS13AQ96RL7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-6.27□□□□□ -3.41
VPS13AQ96RL7 SNORD115-46-201ENST00000390982 71 ntBASIC-6.28□□□□□ -3.41
VPS13AQ96RL7 MIR3662-201ENST00000637030 95 ntBASIC-6.28□□□□□ -3.41
VPS13AQ96RL7 RNU6-663P-201ENST00000391105 106 ntBASIC-6.28□□□□□ -3.41
VPS13AQ96RL7 Y_RNA.337-201ENST00000365312 102 ntBASIC-6.29□□□□□ -3.42
VPS13AQ96RL7 Y_RNA.41-201ENST00000362646 102 ntBASIC-6.29□□□□□ -3.42
VPS13AQ96RL7 RNU6-332P-201ENST00000391193 108 ntBASIC-6.3□□□□□ -3.42
VPS13AQ96RL7 Y_RNA.615-201ENST00000410769 117 ntBASIC-6.3□□□□□ -3.42
VPS13AQ96RL7 RNU7-66P-201ENST00000459469 62 ntBASIC-6.3□□□□□ -3.42
VPS13AQ96RL7 RNU6-264P-201ENST00000517134 104 ntBASIC-6.3□□□□□ -3.42
VPS13AQ96RL7 Y_RNA.262-201ENST00000364641 102 ntBASIC-6.31□□□□□ -3.42
VPS13AQ96RL7 RNU6-634P-201ENST00000459134 106 ntBASIC-6.31□□□□□ -3.42
VPS13AQ96RL7 RNU6-468P-201ENST00000384003 109 ntBASIC-6.32□□□□□ -3.42
VPS13AQ96RL7 AL589823.1-201ENST00000429577 183 ntBASIC-6.32□□□□□ -3.42
VPS13AQ96RL7 Y_RNA.445-201ENST00000384168 102 ntBASIC-6.32□□□□□ -3.42
VPS13AQ96RL7 RNU6-907P-201ENST00000390924 102 ntBASIC-6.32□□□□□ -3.42
VPS13AQ96RL7 Y_RNA.314-201ENST00000365114 102 ntBASIC-6.33□□□□□ -3.42
VPS13AQ96RL7 SNORD37.2-201ENST00000391075 66 ntBASIC-6.34□□□□□ -3.42
VPS13AQ96RL7 AC078883.4-201ENST00000623218 367 ntBASIC-6.34□□□□□ -3.42
VPS13AQ96RL7 RNU5F-7P-201ENST00000363696 115 ntBASIC-6.34□□□□□ -3.42
VPS13AQ96RL7 RNU6-593P-201ENST00000364716 112 ntBASIC-6.34□□□□□ -3.43
VPS13AQ96RL7 MIR1302-6-201ENST00000408466 90 ntBASIC-6.35□□□□□ -3.43
VPS13AQ96RL7 RNU6-130P-201ENST00000411112 103 ntBASIC-6.36□□□□□ -3.43
VPS13AQ96RL7 AC096644.2-201ENST00000429278 159 ntBASIC-6.36□□□□□ -3.43
VPS13AQ96RL7 RNU6-1046P-201ENST00000516538 107 ntBASIC-6.36□□□□□ -3.43
VPS13AQ96RL7 RNU6-259P-201ENST00000383999 107 ntBASIC-6.36□□□□□ -3.43
VPS13AQ96RL7 Y_RNA.620-201ENST00000411009 88 ntBASIC-6.36□□□□□ -3.43
VPS13AQ96RL7 RNU6-209P-201ENST00000384118 107 ntBASIC-6.36□□□□□ -3.43
VPS13AQ96RL7 SNORD81.2-201ENST00000365153 76 ntBASIC-6.37□□□□□ -3.43
VPS13AQ96RL7 RNU6-81P-201ENST00000365608 104 ntBASIC-6.37□□□□□ -3.43
VPS13AQ96RL7 MIR8084-201ENST00000614105 89 ntBASIC-6.37□□□□□ -3.43
VPS13AQ96RL7 RNU6-797P-201ENST00000363101 109 ntBASIC-6.37□□□□□ -3.43
VPS13AQ96RL7 RNU6-373P-201ENST00000411247 98 ntBASIC-6.38□□□□□ -3.43
VPS13AQ96RL7 SNORD116-6-201ENST00000384711 96 ntBASIC-6.38□□□□□ -3.43
VPS13AQ96RL7 RNU6-315P-201ENST00000362666 107 ntBASIC-6.39□□□□□ -3.43
VPS13AQ96RL7 Y_RNA.485-201ENST00000384395 102 ntBASIC-6.4□□□□□ -3.43
VPS13AQ96RL7 RNU6-904P-201ENST00000516206 101 ntBASIC-6.4□□□□□ -3.43
VPS13AQ96RL7 Y_RNA.530-201ENST00000384587 101 ntBASIC-6.4□□□□□ -3.43
VPS13AQ96RL7 RNU6-451P-201ENST00000362921 107 ntBASIC-6.41□□□□□ -3.43
VPS13AQ96RL7 U7.3-201ENST00000616123 62 ntBASIC-6.41□□□□□ -3.43
VPS13AQ96RL7 Y_RNA.472-201ENST00000384322 102 ntBASIC-6.41□□□□□ -3.44
VPS13AQ96RL7 MTND5P5-201ENST00000503764 376 ntBASIC-6.41□□□□□ -3.44
VPS13AQ96RL7 Y_RNA.414-201ENST00000384011 101 ntBASIC-6.42□□□□□ -3.44
VPS13AQ96RL7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-6.42□□□□□ -3.44
VPS13AQ96RL7 AC072026.1-201ENST00000605023 201 ntBASIC-6.42□□□□□ -3.44
VPS13AQ96RL7 AC103706.3-201ENST00000636297 85 ntBASIC-6.43□□□□□ -3.44
VPS13AQ96RL7 Y_RNA.44-201ENST00000362676 108 ntBASIC-6.43□□□□□ -3.44
VPS13AQ96RL7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-6.43□□□□□ -3.44
VPS13AQ96RL7 Y_RNA.187-201ENST00000363918 113 ntBASIC-6.43□□□□□ -3.44
VPS13AQ96RL7 SNORD111B-201ENST00000408587 80 ntBASIC-6.43□□□□□ -3.44
VPS13AQ96RL7 RPS29P30-201ENST00000600975 111 ntBASIC-6.43□□□□□ -3.44
VPS13AQ96RL7 RNY3P15-201ENST00000516297 97 ntBASIC-6.44□□□□□ -3.44
VPS13AQ96RL7 RNU6-687P-201ENST00000516443 89 ntBASIC-6.44□□□□□ -3.44
VPS13AQ96RL7 RNU6-485P-201ENST00000363475 107 ntBASIC-6.44□□□□□ -3.44
Retrieved 100 of 98,524 protein–RNA pairs in 236.8 ms