Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNA5SP330-201ENST00000517096 96 ntBASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 MIR548V-201ENST00000584165 80 ntBASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 MIR4263-201ENST00000584745 83 ntBASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 AC093726.3-201ENST00000637588 150 ntBASIC-0.28□□□□□ -2.45
ZIM3Q96PE6 RNU6-698P-201ENST00000363523 107 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 RNU6-668P-201ENST00000364180 107 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 RNU6-34P-201ENST00000364874 107 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 MIR214-201ENST00000385214 110 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 MTND4LP1-201ENST00000446263 157 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 snoR1.1-201ENST00000628177 80 ntBASIC-0.29□□□□□ -2.46
ZIM3Q96PE6 RNA5SP215-201ENST00000363440 122 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 MIR517B-201ENST00000385102 67 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 MIR196A2-201ENST00000385189 110 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 RNU6-721P-201ENST00000410155 105 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 RNU6-638P-201ENST00000516582 104 ntBASIC-0.3□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 SNORD14C-201ENST00000365382 88 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 SNORA62.4-201ENST00000365504 151 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 MIR630-201ENST00000384957 97 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 SNORD22.1-201ENST00000516331 125 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 AC108676.2-201ENST00000605225 163 ntBASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.31□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 SNORA41B-201ENST00000384785 128 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 SNORD113-2-201ENST00000391082 72 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 SNORD126-201ENST00000459475 77 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 MIR4436A-201ENST00000585278 85 ntBASIC-0.32□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 MIR548C-201ENST00000384815 97 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 MIR124-2-201ENST00000385081 109 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 RNU6-663P-201ENST00000391105 106 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 AC005520.4-201ENST00000604337 90 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 MIR2909-201ENST00000617113 69 ntBASIC-0.33□□□□□ -2.46
ZIM3Q96PE6 RNU6-895P-201ENST00000384125 103 ntBASIC-0.34□□□□□ -2.46
ZIM3Q96PE6 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.34□□□□□ -2.46
ZIM3Q96PE6 MIR4662A-201ENST00000637499 67 ntBASIC-0.34□□□□□ -2.46
ZIM3Q96PE6 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.35□□□□□ -2.47
ZIM3Q96PE6 MIR518B-201ENST00000385127 83 ntBASIC-0.35□□□□□ -2.47
ZIM3Q96PE6 RNU6-284P-201ENST00000411105 106 ntBASIC-0.35□□□□□ -2.47
ZIM3Q96PE6 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 SNORD114-31-201ENST00000363219 75 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 SNORD74.6-201ENST00000364796 70 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 SNORD75.1-201ENST00000408373 60 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 MIR3179-1-201ENST00000578940 84 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 MIR3179-2-201ENST00000579107 84 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 MIR3179-3-201ENST00000579566 84 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 MIR3179-4-201ENST00000617599 84 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 U6.111-201ENST00000636093 83 ntBASIC-0.36□□□□□ -2.47
ZIM3Q96PE6 RNU6-458P-201ENST00000384179 107 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 RNU6-630P-201ENST00000391258 106 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 RNA5SP480-201ENST00000516840 109 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 U6.58-201ENST00000613107 107 ntBASIC-0.37□□□□□ -2.47
ZIM3Q96PE6 SNORD114-14-201ENST00000362723 75 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 SNORD116-16-201ENST00000384533 92 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 SNORA13-201ENST00000458790 133 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 RNU6-542P-201ENST00000516405 103 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 U7.5-201ENST00000517224 61 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 MIR8064-201ENST00000612863 90 ntBASIC-0.38□□□□□ -2.47
ZIM3Q96PE6 SNORA25.4-201ENST00000363666 124 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 SNORD30.1-201ENST00000391309 70 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 AP000533.3-201ENST00000447704 118 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 RNU6-539P-201ENST00000516665 103 ntBASIC-0.39□□□□□ -2.47
ZIM3Q96PE6 RNU6-598P-201ENST00000364017 105 ntBASIC-0.4□□□□□ -2.47
ZIM3Q96PE6 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
ZIM3Q96PE6 RNU6-871P-201ENST00000516122 100 ntBASIC-0.4□□□□□ -2.47
ZIM3Q96PE6 AP002795.1-201ENST00000534879 84 ntBASIC-0.4□□□□□ -2.47
ZIM3Q96PE6 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 RNU6-649P-201ENST00000384463 107 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 MIR329-2-201ENST00000385029 84 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 MIR204-201ENST00000385200 110 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 SNORD19-201ENST00000391191 68 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 SNORA3B-201ENST00000391305 131 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 RNU7-88P-201ENST00000458752 63 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.41□□□□□ -2.48
ZIM3Q96PE6 SNORD1B-201ENST00000363091 84 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 MIR527-201ENST00000385244 85 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 AC114801.3-201ENST00000510231 177 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 RNU6-732P-201ENST00000516033 103 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 MIR4511-201ENST00000582784 87 ntBASIC-0.42□□□□□ -2.48
ZIM3Q96PE6 SNORD60.1-201ENST00000362451 73 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 RNU6-924P-201ENST00000362926 108 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 RNA5SP457-201ENST00000363657 124 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.43□□□□□ -2.48
ZIM3Q96PE6 RNU6-800P-201ENST00000384473 103 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms