Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ACA64.5-201ENST00000516207 127 ntBASIC1.19□□□□□ -2.22
TRIM47Q96LD4 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
TRIM47Q96LD4 MIR6507-201ENST00000613630 70 ntBASIC1.19□□□□□ -2.22
TRIM47Q96LD4 Y_RNA.30-201ENST00000362572 97 ntBASIC1.18□□□□□ -2.22
TRIM47Q96LD4 AL445584.3-201ENST00000617173 78 ntBASIC1.18□□□□□ -2.22
TRIM47Q96LD4 RNU6-1047P-201ENST00000364418 107 ntBASIC1.17□□□□□ -2.22
TRIM47Q96LD4 SNORA36.2-201ENST00000384004 127 ntBASIC1.17□□□□□ -2.22
TRIM47Q96LD4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.17□□□□□ -2.22
TRIM47Q96LD4 RNU6-133P-201ENST00000383989 107 ntBASIC1.16□□□□□ -2.22
TRIM47Q96LD4 SNORD111B-201ENST00000408587 80 ntBASIC1.16□□□□□ -2.22
TRIM47Q96LD4 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
TRIM47Q96LD4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM47Q96LD4 MIR532-201ENST00000385025 91 ntBASIC1.15□□□□□ -2.23
TRIM47Q96LD4 SNORD118-201ENST00000363593 134 ntBASIC1.14□□□□□ -2.23
TRIM47Q96LD4 RNU4-38P-201ENST00000364472 129 ntBASIC1.14□□□□□ -2.23
TRIM47Q96LD4 MIR193B-201ENST00000384907 83 ntBASIC1.14□□□□□ -2.23
TRIM47Q96LD4 RNU6-258P-201ENST00000390884 101 ntBASIC1.14□□□□□ -2.23
TRIM47Q96LD4 MIR1468-201ENST00000410600 86 ntBASIC1.14□□□□□ -2.23
TRIM47Q96LD4 AC104408.1-201ENST00000605241 170 ntBASIC1.14□□□□□ -2.23
TRIM47Q96LD4 MIR4426-201ENST00000640330 63 ntBASIC1.14□□□□□ -2.23
TRIM47Q96LD4 MIR140-201ENST00000385282 100 ntBASIC1.13□□□□□ -2.23
TRIM47Q96LD4 AL353765.1-201ENST00000605514 183 ntBASIC1.13□□□□□ -2.23
TRIM47Q96LD4 Y_RNA.613-201ENST00000410726 97 ntBASIC1.12□□□□□ -2.23
TRIM47Q96LD4 RNU6-1238P-201ENST00000517215 102 ntBASIC1.12□□□□□ -2.23
TRIM47Q96LD4 MIR1273G-201ENST00000577677 100 ntBASIC1.12□□□□□ -2.23
TRIM47Q96LD4 MIR6755-201ENST00000619993 66 ntBASIC1.12□□□□□ -2.23
TRIM47Q96LD4 uc_338.36-201ENST00000622331 158 ntBASIC1.12□□□□□ -2.23
TRIM47Q96LD4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
TRIM47Q96LD4 SNORA62.4-201ENST00000365504 151 ntBASIC1.11□□□□□ -2.23
TRIM47Q96LD4 MIR760-201ENST00000390220 80 ntBASIC1.11□□□□□ -2.23
TRIM47Q96LD4 MIR876-201ENST00000401147 81 ntBASIC1.11□□□□□ -2.23
TRIM47Q96LD4 SNORA40.8-201ENST00000411034 126 ntBASIC1.11□□□□□ -2.23
TRIM47Q96LD4 MIR3925-201ENST00000584674 77 ntBASIC1.11□□□□□ -2.23
TRIM47Q96LD4 RNU6-485P-201ENST00000363475 107 ntBASIC1.1□□□□□ -2.23
TRIM47Q96LD4 MIR106A-201ENST00000384870 81 ntBASIC1.1□□□□□ -2.23
TRIM47Q96LD4 AL590095.2-201ENST00000604136 117 ntBASIC1.1□□□□□ -2.23
TRIM47Q96LD4 AL391099.1-201ENST00000624635 187 ntBASIC1.1□□□□□ -2.23
TRIM47Q96LD4 RNU6-732P-201ENST00000516033 103 ntBASIC1.09□□□□□ -2.23
TRIM47Q96LD4 RNU4-54P-201ENST00000516428 129 ntBASIC1.09□□□□□ -2.23
TRIM47Q96LD4 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
TRIM47Q96LD4 RNA5SP457-201ENST00000363657 124 ntBASIC1.08□□□□□ -2.24
TRIM47Q96LD4 RNU6-1133P-201ENST00000410963 100 ntBASIC1.08□□□□□ -2.24
TRIM47Q96LD4 SNORD71-201ENST00000411292 86 ntBASIC1.08□□□□□ -2.24
TRIM47Q96LD4 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
TRIM47Q96LD4 MIR4714-201ENST00000580728 77 ntBASIC1.08□□□□□ -2.24
TRIM47Q96LD4 MIR520D-201ENST00000385002 87 ntBASIC1.07□□□□□ -2.24
TRIM47Q96LD4 MIR548Q-201ENST00000408404 100 ntBASIC1.07□□□□□ -2.24
TRIM47Q96LD4 Y_RNA.699-201ENST00000516803 93 ntBASIC1.07□□□□□ -2.24
TRIM47Q96LD4 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
TRIM47Q96LD4 Y_RNA.178-201ENST00000363832 102 ntBASIC1.06□□□□□ -2.24
TRIM47Q96LD4 SNORA27.2-201ENST00000363365 126 ntBASIC1.05□□□□□ -2.24
TRIM47Q96LD4 RNU6-848P-201ENST00000515948 107 ntBASIC1.05□□□□□ -2.24
TRIM47Q96LD4 RNU6-617P-201ENST00000516147 107 ntBASIC1.05□□□□□ -2.24
TRIM47Q96LD4 RNU6-473P-201ENST00000516164 107 ntBASIC1.05□□□□□ -2.24
TRIM47Q96LD4 RNU6-1049P-201ENST00000516414 107 ntBASIC1.05□□□□□ -2.24
TRIM47Q96LD4 MIR499B-201ENST00000636498 73 ntBASIC1.05□□□□□ -2.24
TRIM47Q96LD4 RNA5SP98-201ENST00000363158 137 ntBASIC1.04□□□□□ -2.24
TRIM47Q96LD4 RNA5SP128-201ENST00000365305 116 ntBASIC1.04□□□□□ -2.24
TRIM47Q96LD4 MIR518A1-201ENST00000385068 85 ntBASIC1.04□□□□□ -2.24
TRIM47Q96LD4 MIR6513-201ENST00000621188 64 ntBASIC1.04□□□□□ -2.24
TRIM47Q96LD4 RNU6-973P-201ENST00000364690 107 ntBASIC1.03□□□□□ -2.24
TRIM47Q96LD4 RNU7-129P-201ENST00000516128 62 ntBASIC1.03□□□□□ -2.24
TRIM47Q96LD4 SCARNA11.2-201ENST00000517183 154 ntBASIC1.03□□□□□ -2.24
TRIM47Q96LD4 RNU7-55P-201ENST00000459426 62 ntBASIC1.02□□□□□ -2.25
TRIM47Q96LD4 Y_RNA.115-201ENST00000363272 98 ntBASIC1.01□□□□□ -2.25
TRIM47Q96LD4 RNU6-300P-201ENST00000459080 104 ntBASIC1.01□□□□□ -2.25
TRIM47Q96LD4 MIR924-201ENST00000638017 53 ntBASIC1.01□□□□□ -2.25
TRIM47Q96LD4 SNORD114-23-201ENST00000363536 72 ntBASIC1□□□□□ -2.25
TRIM47Q96LD4 RNU6-361P-201ENST00000364454 107 ntBASIC1□□□□□ -2.25
TRIM47Q96LD4 SNORD19-201ENST00000391191 68 ntBASIC1□□□□□ -2.25
TRIM47Q96LD4 AC010487.4-201ENST00000637027 61 ntBASIC1□□□□□ -2.25
TRIM47Q96LD4 MIR202-201ENST00000362219 110 ntBASIC0.99□□□□□ -2.25
TRIM47Q96LD4 MIR936-201ENST00000401264 98 ntBASIC0.99□□□□□ -2.25
TRIM47Q96LD4 AC096531.1-201ENST00000419107 107 ntBASIC0.99□□□□□ -2.25
TRIM47Q96LD4 RNY1P9-201ENST00000532431 109 ntBASIC0.99□□□□□ -2.25
TRIM47Q96LD4 RNA5SP169-201ENST00000517268 117 ntBASIC0.98□□□□□ -2.25
TRIM47Q96LD4 MIR5704-201ENST00000584029 77 ntBASIC0.98□□□□□ -2.25
TRIM47Q96LD4 Y_RNA.68-201ENST00000362881 102 ntBASIC0.97□□□□□ -2.25
TRIM47Q96LD4 RNY3P8-201ENST00000411366 126 ntBASIC0.96□□□□□ -2.26
TRIM47Q96LD4 MIR8068-201ENST00000618032 68 ntBASIC0.96□□□□□ -2.26
TRIM47Q96LD4 MIR124-2-201ENST00000385081 109 ntBASIC0.95□□□□□ -2.26
TRIM47Q96LD4 AC108740.1-201ENST00000498629 225 ntBASIC0.95□□□□□ -2.26
TRIM47Q96LD4 RNU6-1233P-201ENST00000362922 102 ntBASIC0.94□□□□□ -2.26
TRIM47Q96LD4 SNORD114-2-201ENST00000363953 78 ntBASIC0.94□□□□□ -2.26
TRIM47Q96LD4 RNU6-900P-201ENST00000384498 102 ntBASIC0.94□□□□□ -2.26
TRIM47Q96LD4 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
TRIM47Q96LD4 RNA5SP330-201ENST00000517096 96 ntBASIC0.94□□□□□ -2.26
TRIM47Q96LD4 MIR6835-201ENST00000621552 64 ntBASIC0.94□□□□□ -2.26
TRIM47Q96LD4 SNORA42.1-201ENST00000363515 137 ntBASIC0.93□□□□□ -2.26
TRIM47Q96LD4 SNORA17.4-201ENST00000391287 132 ntBASIC0.93□□□□□ -2.26
TRIM47Q96LD4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TRIM47Q96LD4 RNU6-455P-201ENST00000384681 107 ntBASIC0.91□□□□□ -2.26
TRIM47Q96LD4 MIR608-201ENST00000384820 100 ntBASIC0.91□□□□□ -2.26
TRIM47Q96LD4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
TRIM47Q96LD4 RNA5SP193-201ENST00000410353 107 ntBASIC0.91□□□□□ -2.26
TRIM47Q96LD4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
TRIM47Q96LD4 MIR508-201ENST00000384857 115 ntBASIC0.9□□□□□ -2.27
TRIM47Q96LD4 RNU6-176P-201ENST00000517196 105 ntBASIC0.9□□□□□ -2.27
TRIM47Q96LD4 MIR6854-201ENST00000614935 69 ntBASIC0.9□□□□□ -2.27
TRIM47Q96LD4 Y_RNA.433-201ENST00000384089 102 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms