Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 uc_338.36-201ENST00000622331 158 ntBASIC0.08□□□□□ -2.4
ATP2A3Q93084 MIR655-201ENST00000362159 97 ntBASIC0.07□□□□□ -2.4
ATP2A3Q93084 SNORD114-31-201ENST00000363219 75 ntBASIC0.07□□□□□ -2.4
ATP2A3Q93084 RNU6-455P-201ENST00000384681 107 ntBASIC0.07□□□□□ -2.4
ATP2A3Q93084 RNU7-159P-201ENST00000459284 62 ntBASIC0.07□□□□□ -2.4
ATP2A3Q93084 RNU7-55P-201ENST00000459426 62 ntBASIC0.06□□□□□ -2.4
ATP2A3Q93084 IGLVI-20-201ENST00000519296 130 ntBASIC0.06□□□□□ -2.4
ATP2A3Q93084 MIR4667-201ENST00000578933 66 ntBASIC0.06□□□□□ -2.4
ATP2A3Q93084 RNA5SP215-201ENST00000363440 122 ntBASIC0.05□□□□□ -2.4
ATP2A3Q93084 RNA5SP368-201ENST00000364298 116 ntBASIC0.05□□□□□ -2.4
ATP2A3Q93084 Y_RNA.325-201ENST00000365171 122 ntBASIC0.05□□□□□ -2.4
ATP2A3Q93084 RNU6-302P-201ENST00000365249 107 ntBASIC0.05□□□□□ -2.4
ATP2A3Q93084 MIR517B-201ENST00000385102 67 ntBASIC0.05□□□□□ -2.4
ATP2A3Q93084 RNU6-758P-201ENST00000516292 89 ntBASIC0.05□□□□□ -2.4
ATP2A3Q93084 SNORD56B-201ENST00000384713 71 ntBASIC0.04□□□□□ -2.4
ATP2A3Q93084 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
ATP2A3Q93084 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
ATP2A3Q93084 RNA5SP25-201ENST00000410815 110 ntBASIC0.04□□□□□ -2.4
ATP2A3Q93084 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.04□□□□□ -2.4
ATP2A3Q93084 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
ATP2A3Q93084 MIR5704-201ENST00000584029 77 ntBASIC0.04□□□□□ -2.4
ATP2A3Q93084 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.04□□□□□ -2.4
ATP2A3Q93084 RNU6-698P-201ENST00000363523 107 ntBASIC0.03□□□□□ -2.4
ATP2A3Q93084 RNU6-34P-201ENST00000364874 107 ntBASIC0.03□□□□□ -2.4
ATP2A3Q93084 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.03□□□□□ -2.4
ATP2A3Q93084 SCARNA21.1-201ENST00000515996 128 ntBASIC0.03□□□□□ -2.4
ATP2A3Q93084 MIR4464-201ENST00000580818 92 ntBASIC0.03□□□□□ -2.4
ATP2A3Q93084 AL353803.5-201ENST00000599815 141 ntBASIC0.03□□□□□ -2.4
ATP2A3Q93084 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
ATP2A3Q93084 RNU6-900P-201ENST00000384498 102 ntBASIC0.02□□□□□ -2.41
ATP2A3Q93084 AL021921.1-201ENST00000442774 93 ntBASIC0.02□□□□□ -2.41
ATP2A3Q93084 RNU6-542P-201ENST00000516405 103 ntBASIC0.02□□□□□ -2.41
ATP2A3Q93084 MIR4511-201ENST00000582784 87 ntBASIC0.02□□□□□ -2.41
ATP2A3Q93084 MIR8068-201ENST00000618032 68 ntBASIC0.02□□□□□ -2.41
ATP2A3Q93084 AL391099.1-201ENST00000624635 187 ntBASIC0.02□□□□□ -2.41
ATP2A3Q93084 Y_RNA.246-201ENST00000364495 108 ntBASIC0.01□□□□□ -2.41
ATP2A3Q93084 Y_RNA.698-201ENST00000516798 118 ntBASIC0.01□□□□□ -2.41
ATP2A3Q93084 MIR4432-201ENST00000581823 84 ntBASIC0.01□□□□□ -2.41
ATP2A3Q93084 AP001180.6-201ENST00000584918 159 ntBASIC0.01□□□□□ -2.41
ATP2A3Q93084 RNU6-973P-201ENST00000364690 107 ntBASIC0□□□□□ -2.41
ATP2A3Q93084 SNORA41B-201ENST00000384785 128 ntBASIC0□□□□□ -2.41
ATP2A3Q93084 RNU7-154P-201ENST00000516194 62 ntBASIC0□□□□□ -2.41
ATP2A3Q93084 MIR4493-201ENST00000584016 73 ntBASIC0□□□□□ -2.41
ATP2A3Q93084 RNU6-590P-201ENST00000365039 107 ntBASIC-0.01□□□□□ -2.41
ATP2A3Q93084 RNU6-471P-201ENST00000383944 106 ntBASIC-0.01□□□□□ -2.41
ATP2A3Q93084 SNORD113-2-201ENST00000391082 72 ntBASIC-0.01□□□□□ -2.41
ATP2A3Q93084 AC096531.1-201ENST00000419107 107 ntBASIC-0.01□□□□□ -2.41
ATP2A3Q93084 RNA5SP192-201ENST00000364404 120 ntBASIC-0.02□□□□□ -2.41
ATP2A3Q93084 SNORD114-15-201ENST00000364687 72 ntBASIC-0.02□□□□□ -2.41
ATP2A3Q93084 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.02□□□□□ -2.41
ATP2A3Q93084 MIR6888-201ENST00000621977 67 ntBASIC-0.02□□□□□ -2.41
ATP2A3Q93084 SNORD49B-201ENST00000365172 72 ntBASIC-0.03□□□□□ -2.41
ATP2A3Q93084 MIR604-201ENST00000384880 94 ntBASIC-0.03□□□□□ -2.41
ATP2A3Q93084 RNA5SP470-201ENST00000516463 106 ntBASIC-0.03□□□□□ -2.41
ATP2A3Q93084 AC103706.3-201ENST00000636297 85 ntBASIC-0.03□□□□□ -2.41
ATP2A3Q93084 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.04□□□□□ -2.42
ATP2A3Q93084 snoR1.1-201ENST00000628177 80 ntBASIC-0.04□□□□□ -2.42
ATP2A3Q93084 RNU6-246P-201ENST00000384702 107 ntBASIC-0.05□□□□□ -2.42
ATP2A3Q93084 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.05□□□□□ -2.42
ATP2A3Q93084 AL445193.1-201ENST00000441183 141 ntBASIC-0.05□□□□□ -2.42
ATP2A3Q93084 AC104692.1-201ENST00000472406 90 ntBASIC-0.05□□□□□ -2.42
ATP2A3Q93084 AC114755.3-201ENST00000481111 251 ntBASIC-0.05□□□□□ -2.42
ATP2A3Q93084 RNA5SP67-201ENST00000516422 131 ntBASIC-0.05□□□□□ -2.42
ATP2A3Q93084 AL590491.3-201ENST00000610731 82 ntBASIC-0.05□□□□□ -2.42
ATP2A3Q93084 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.05□□□□□ -2.42
ATP2A3Q93084 SNORD60.1-201ENST00000362451 73 ntBASIC-0.06□□□□□ -2.42
ATP2A3Q93084 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.06□□□□□ -2.42
ATP2A3Q93084 SNORA25.5-201ENST00000363782 126 ntBASIC-0.06□□□□□ -2.42
ATP2A3Q93084 RNU6-46P-201ENST00000383860 107 ntBASIC-0.06□□□□□ -2.42
ATP2A3Q93084 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
ATP2A3Q93084 AC110620.1-201ENST00000416042 228 ntBASIC-0.06□□□□□ -2.42
ATP2A3Q93084 MIR4280-201ENST00000582178 76 ntBASIC-0.06□□□□□ -2.42
ATP2A3Q93084 RNU6-92P-201ENST00000605893 104 ntBASIC-0.06□□□□□ -2.42
ATP2A3Q93084 AL445584.3-201ENST00000617173 78 ntBASIC-0.06□□□□□ -2.42
ATP2A3Q93084 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.07□□□□□ -2.42
ATP2A3Q93084 RNU6-788P-201ENST00000390967 104 ntBASIC-0.07□□□□□ -2.42
ATP2A3Q93084 AC108676.2-201ENST00000605225 163 ntBASIC-0.07□□□□□ -2.42
ATP2A3Q93084 RNA5SP331-201ENST00000364986 107 ntBASIC-0.08□□□□□ -2.42
ATP2A3Q93084 RNU6-901P-201ENST00000384593 106 ntBASIC-0.08□□□□□ -2.42
ATP2A3Q93084 MIR1295B-201ENST00000636144 60 ntBASIC-0.08□□□□□ -2.42
ATP2A3Q93084 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.09□□□□□ -2.42
ATP2A3Q93084 MIR214-201ENST00000385214 110 ntBASIC-0.09□□□□□ -2.42
ATP2A3Q93084 MIR527-201ENST00000385244 85 ntBASIC-0.09□□□□□ -2.42
ATP2A3Q93084 SNORD38.3-201ENST00000516599 73 ntBASIC-0.09□□□□□ -2.42
ATP2A3Q93084 MIR6854-201ENST00000614935 69 ntBASIC-0.09□□□□□ -2.42
ATP2A3Q93084 SNORD116-16-201ENST00000384533 92 ntBASIC-0.1□□□□□ -2.43
ATP2A3Q93084 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
ATP2A3Q93084 AC125388.1-201ENST00000459631 156 ntBASIC-0.1□□□□□ -2.43
ATP2A3Q93084 MIR4645-201ENST00000583158 77 ntBASIC-0.1□□□□□ -2.43
ATP2A3Q93084 SNORD114-12-201ENST00000365400 75 ntBASIC-0.11□□□□□ -2.43
ATP2A3Q93084 RNU6-669P-201ENST00000365575 107 ntBASIC-0.11□□□□□ -2.43
ATP2A3Q93084 RNU6-458P-201ENST00000384179 107 ntBASIC-0.11□□□□□ -2.43
ATP2A3Q93084 RNU6-122P-201ENST00000516818 107 ntBASIC-0.11□□□□□ -2.43
ATP2A3Q93084 U6.58-201ENST00000613107 107 ntBASIC-0.11□□□□□ -2.43
ATP2A3Q93084 MIR101-1-201ENST00000362265 75 ntBASIC-0.12□□□□□ -2.43
ATP2A3Q93084 SNORD114-11-201ENST00000363738 75 ntBASIC-0.12□□□□□ -2.43
ATP2A3Q93084 SNORD1B-201ENST00000363091 84 ntBASIC-0.13□□□□□ -2.43
ATP2A3Q93084 RNA5SP169-201ENST00000517268 117 ntBASIC-0.13□□□□□ -2.43
ATP2A3Q93084 MIR6851-201ENST00000617060 67 ntBASIC-0.13□□□□□ -2.43
ATP2A3Q93084 MIR409-201ENST00000362237 79 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms