Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC005520.4-201ENST00000604337 90 ntBASIC-0.06□□□□□ -2.42
ERCC4Q92889 MIR1295B-201ENST00000636144 60 ntBASIC-0.06□□□□□ -2.42
ERCC4Q92889 RNU6-698P-201ENST00000363523 107 ntBASIC-0.07□□□□□ -2.42
ERCC4Q92889 RNU6-34P-201ENST00000364874 107 ntBASIC-0.07□□□□□ -2.42
ERCC4Q92889 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.07□□□□□ -2.42
ERCC4Q92889 AL391099.1-201ENST00000624635 187 ntBASIC-0.07□□□□□ -2.42
ERCC4Q92889 SNORD49B-201ENST00000365172 72 ntBASIC-0.08□□□□□ -2.42
ERCC4Q92889 MIR517B-201ENST00000385102 67 ntBASIC-0.08□□□□□ -2.42
ERCC4Q92889 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
ERCC4Q92889 IGLVI-20-201ENST00000519296 130 ntBASIC-0.08□□□□□ -2.42
ERCC4Q92889 MIR5589-201ENST00000579442 60 ntBASIC-0.08□□□□□ -2.42
ERCC4Q92889 MIR4432-201ENST00000581823 84 ntBASIC-0.08□□□□□ -2.42
ERCC4Q92889 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.09□□□□□ -2.42
ERCC4Q92889 MIR548C-201ENST00000384815 97 ntBASIC-0.09□□□□□ -2.42
ERCC4Q92889 RNU6-542P-201ENST00000516405 103 ntBASIC-0.09□□□□□ -2.42
ERCC4Q92889 SNORD56B-201ENST00000384713 71 ntBASIC-0.1□□□□□ -2.43
ERCC4Q92889 MIR548V-201ENST00000584165 80 ntBASIC-0.1□□□□□ -2.43
ERCC4Q92889 AL353803.5-201ENST00000599815 141 ntBASIC-0.1□□□□□ -2.43
ERCC4Q92889 U4.4-201ENST00000620626 117 ntBASIC-0.1□□□□□ -2.43
ERCC4Q92889 SNORA18.1-201ENST00000363418 128 ntBASIC-0.11□□□□□ -2.43
ERCC4Q92889 RNU6-800P-201ENST00000384473 103 ntBASIC-0.11□□□□□ -2.43
ERCC4Q92889 MIR4636-201ENST00000582271 80 ntBASIC-0.11□□□□□ -2.43
ERCC4Q92889 SNORD114-31-201ENST00000363219 75 ntBASIC-0.12□□□□□ -2.43
ERCC4Q92889 RNA5SP476-201ENST00000516613 103 ntBASIC-0.12□□□□□ -2.43
ERCC4Q92889 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.12□□□□□ -2.43
ERCC4Q92889 HAR1A.1-201ENST00000459583 118 ntBASIC-0.13□□□□□ -2.43
ERCC4Q92889 AL590491.3-201ENST00000610731 82 ntBASIC-0.13□□□□□ -2.43
ERCC4Q92889 snoR1.1-201ENST00000628177 80 ntBASIC-0.13□□□□□ -2.43
ERCC4Q92889 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.14□□□□□ -2.43
ERCC4Q92889 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.14□□□□□ -2.43
ERCC4Q92889 MIR4511-201ENST00000582784 87 ntBASIC-0.15□□□□□ -2.43
ERCC4Q92889 uc_338.36-201ENST00000622331 158 ntBASIC-0.15□□□□□ -2.43
ERCC4Q92889 MIR630-201ENST00000384957 97 ntBASIC-0.16□□□□□ -2.44
ERCC4Q92889 Z95118.1-201ENST00000421372 247 ntBASIC-0.16□□□□□ -2.44
ERCC4Q92889 AC139453.2-201ENST00000487255 133 ntBASIC-0.16□□□□□ -2.44
ERCC4Q92889 MIR548AG1-201ENST00000579932 66 ntBASIC-0.16□□□□□ -2.44
ERCC4Q92889 MIR4464-201ENST00000580818 92 ntBASIC-0.16□□□□□ -2.44
ERCC4Q92889 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.17□□□□□ -2.44
ERCC4Q92889 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.17□□□□□ -2.44
ERCC4Q92889 SNORA62.4-201ENST00000365504 151 ntBASIC-0.17□□□□□ -2.44
ERCC4Q92889 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.17□□□□□ -2.44
ERCC4Q92889 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.17□□□□□ -2.44
ERCC4Q92889 MIR4280-201ENST00000582178 76 ntBASIC-0.17□□□□□ -2.44
ERCC4Q92889 MIR3666-201ENST00000607845 111 ntBASIC-0.17□□□□□ -2.44
ERCC4Q92889 AC103706.3-201ENST00000636297 85 ntBASIC-0.17□□□□□ -2.44
ERCC4Q92889 RNU6-590P-201ENST00000365039 107 ntBASIC-0.18□□□□□ -2.44
ERCC4Q92889 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
ERCC4Q92889 MIR4802-201ENST00000581881 80 ntBASIC-0.18□□□□□ -2.44
ERCC4Q92889 SNORD114-12-201ENST00000365400 75 ntBASIC-0.19□□□□□ -2.44
ERCC4Q92889 SNORD113-2-201ENST00000391082 72 ntBASIC-0.19□□□□□ -2.44
ERCC4Q92889 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.19□□□□□ -2.44
ERCC4Q92889 SNORA32.1-201ENST00000364514 115 ntBASIC-0.2□□□□□ -2.44
ERCC4Q92889 RNU6-471P-201ENST00000383944 106 ntBASIC-0.2□□□□□ -2.44
ERCC4Q92889 RNU6-901P-201ENST00000384593 106 ntBASIC-0.2□□□□□ -2.44
ERCC4Q92889 AC114755.3-201ENST00000481111 251 ntBASIC-0.2□□□□□ -2.44
ERCC4Q92889 MIR5704-201ENST00000584029 77 ntBASIC-0.2□□□□□ -2.44
ERCC4Q92889 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.21□□□□□ -2.44
ERCC4Q92889 MIR4263-201ENST00000584745 83 ntBASIC-0.21□□□□□ -2.44
ERCC4Q92889 MIR6854-201ENST00000614935 69 ntBASIC-0.21□□□□□ -2.44
ERCC4Q92889 MIR6888-201ENST00000621977 67 ntBASIC-0.21□□□□□ -2.44
ERCC4Q92889 MIR214-201ENST00000385214 110 ntBASIC-0.22□□□□□ -2.44
ERCC4Q92889 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
ERCC4Q92889 RNU6-758P-201ENST00000516292 89 ntBASIC-0.22□□□□□ -2.44
ERCC4Q92889 RNA5SP66-201ENST00000517178 101 ntBASIC-0.22□□□□□ -2.44
ERCC4Q92889 AL445584.3-201ENST00000617173 78 ntBASIC-0.22□□□□□ -2.44
ERCC4Q92889 MIR8068-201ENST00000618032 68 ntBASIC-0.22□□□□□ -2.44
ERCC4Q92889 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.23□□□□□ -2.45
ERCC4Q92889 RNA5SP300-201ENST00000391197 107 ntBASIC-0.23□□□□□ -2.45
ERCC4Q92889 MIR6851-201ENST00000617060 67 ntBASIC-0.23□□□□□ -2.45
ERCC4Q92889 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
ERCC4Q92889 snoU13.19-201ENST00000459148 104 ntBASIC-0.25□□□□□ -2.45
ERCC4Q92889 MIR4645-201ENST00000583158 77 ntBASIC-0.25□□□□□ -2.45
ERCC4Q92889 AP001180.6-201ENST00000584918 159 ntBASIC-0.25□□□□□ -2.45
ERCC4Q92889 AC108676.2-201ENST00000605225 163 ntBASIC-0.25□□□□□ -2.45
ERCC4Q92889 RNU6-92P-201ENST00000605893 104 ntBASIC-0.25□□□□□ -2.45
ERCC4Q92889 RNA5SP368-201ENST00000364298 116 ntBASIC-0.26□□□□□ -2.45
ERCC4Q92889 SNORA25.5-201ENST00000363782 126 ntBASIC-0.28□□□□□ -2.45
ERCC4Q92889 SNORA41B-201ENST00000384785 128 ntBASIC-0.28□□□□□ -2.45
ERCC4Q92889 AL445193.1-201ENST00000441183 141 ntBASIC-0.28□□□□□ -2.45
ERCC4Q92889 AC093726.3-201ENST00000637588 150 ntBASIC-0.28□□□□□ -2.45
ERCC4Q92889 RNU6-669P-201ENST00000365575 107 ntBASIC-0.29□□□□□ -2.46
ERCC4Q92889 SNORD116-16-201ENST00000384533 92 ntBASIC-0.29□□□□□ -2.46
ERCC4Q92889 RNU6-246P-201ENST00000384702 107 ntBASIC-0.29□□□□□ -2.46
ERCC4Q92889 RNA5SP25-201ENST00000410815 110 ntBASIC-0.29□□□□□ -2.46
ERCC4Q92889 AC110620.1-201ENST00000416042 228 ntBASIC-0.29□□□□□ -2.46
ERCC4Q92889 MIR604-201ENST00000384880 94 ntBASIC-0.3□□□□□ -2.46
ERCC4Q92889 MIR527-201ENST00000385244 85 ntBASIC-0.3□□□□□ -2.46
ERCC4Q92889 MIR4493-201ENST00000584016 73 ntBASIC-0.3□□□□□ -2.46
ERCC4Q92889 MIR4788-201ENST00000639104 80 ntBASIC-0.3□□□□□ -2.46
ERCC4Q92889 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.3□□□□□ -2.46
ERCC4Q92889 SNORD38.3-201ENST00000516599 73 ntBASIC-0.31□□□□□ -2.46
ERCC4Q92889 SNORD60.1-201ENST00000362451 73 ntBASIC-0.32□□□□□ -2.46
ERCC4Q92889 SNORD114-28-201ENST00000363610 72 ntBASIC-0.32□□□□□ -2.46
ERCC4Q92889 RNU6-30P-201ENST00000384561 107 ntBASIC-0.32□□□□□ -2.46
ERCC4Q92889 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
ERCC4Q92889 RNA5SP192-201ENST00000364404 120 ntBASIC-0.33□□□□□ -2.46
ERCC4Q92889 SNORD114-15-201ENST00000364687 72 ntBASIC-0.33□□□□□ -2.46
ERCC4Q92889 SNORD74.6-201ENST00000364796 70 ntBASIC-0.33□□□□□ -2.46
ERCC4Q92889 RNU6-458P-201ENST00000384179 107 ntBASIC-0.33□□□□□ -2.46
ERCC4Q92889 MIR8064-201ENST00000612863 90 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms