Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.36□□□□□ -2.35
SIMC1Q8NDZ2 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
SIMC1Q8NDZ2 AC069113.3-201ENST00000521019 150 ntBASIC0.36□□□□□ -2.35
SIMC1Q8NDZ2 AP000676.1-201ENST00000533307 52 ntBASIC0.36□□□□□ -2.35
SIMC1Q8NDZ2 Y_RNA.282-201ENST00000364793 102 ntBASIC0.34□□□□□ -2.36
SIMC1Q8NDZ2 MIR643-201ENST00000385267 97 ntBASIC0.34□□□□□ -2.36
SIMC1Q8NDZ2 SNORD116.2-201ENST00000391251 93 ntBASIC0.34□□□□□ -2.36
SIMC1Q8NDZ2 RNU6-231P-201ENST00000517122 103 ntBASIC0.33□□□□□ -2.36
SIMC1Q8NDZ2 uc_338.36-201ENST00000622331 158 ntBASIC0.33□□□□□ -2.36
SIMC1Q8NDZ2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
SIMC1Q8NDZ2 Y_RNA.74-201ENST00000362911 99 ntBASIC0.32□□□□□ -2.36
SIMC1Q8NDZ2 SNORD116-16-201ENST00000384533 92 ntBASIC0.32□□□□□ -2.36
SIMC1Q8NDZ2 AC108740.1-201ENST00000498629 225 ntBASIC0.32□□□□□ -2.36
SIMC1Q8NDZ2 Y_RNA.722-201ENST00000517279 114 ntBASIC0.32□□□□□ -2.36
SIMC1Q8NDZ2 SNORD1B-201ENST00000363091 84 ntBASIC0.31□□□□□ -2.36
SIMC1Q8NDZ2 RNA5SP98-201ENST00000363158 137 ntBASIC0.31□□□□□ -2.36
SIMC1Q8NDZ2 Y_RNA.109-201ENST00000363215 102 ntBASIC0.31□□□□□ -2.36
SIMC1Q8NDZ2 MIR329-2-201ENST00000385029 84 ntBASIC0.31□□□□□ -2.36
SIMC1Q8NDZ2 MIR548H2-201ENST00000408874 88 ntBASIC0.31□□□□□ -2.36
SIMC1Q8NDZ2 RNU7-154P-201ENST00000516194 62 ntBASIC0.31□□□□□ -2.36
SIMC1Q8NDZ2 RNA5SP470-201ENST00000516463 106 ntBASIC0.31□□□□□ -2.36
SIMC1Q8NDZ2 RNU6-458P-201ENST00000384179 107 ntBASIC0.3□□□□□ -2.36
SIMC1Q8NDZ2 MIR579-201ENST00000385221 98 ntBASIC0.3□□□□□ -2.36
SIMC1Q8NDZ2 RNU6-172P-201ENST00000411000 93 ntBASIC0.3□□□□□ -2.36
SIMC1Q8NDZ2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.3□□□□□ -2.36
SIMC1Q8NDZ2 AL353803.5-201ENST00000599815 141 ntBASIC0.3□□□□□ -2.36
SIMC1Q8NDZ2 U6.58-201ENST00000613107 107 ntBASIC0.3□□□□□ -2.36
SIMC1Q8NDZ2 RNU6-1184P-201ENST00000384588 108 ntBASIC0.29□□□□□ -2.36
SIMC1Q8NDZ2 SNORA40.16-201ENST00000517238 121 ntBASIC0.29□□□□□ -2.36
SIMC1Q8NDZ2 MIR4432-201ENST00000581823 84 ntBASIC0.29□□□□□ -2.36
SIMC1Q8NDZ2 U2.18-201ENST00000622185 84 ntBASIC0.29□□□□□ -2.36
SIMC1Q8NDZ2 MIR6514-201ENST00000622549 70 ntBASIC0.29□□□□□ -2.36
SIMC1Q8NDZ2 RNU6-810P-201ENST00000364001 107 ntBASIC0.28□□□□□ -2.36
SIMC1Q8NDZ2 RNU6-246P-201ENST00000384702 107 ntBASIC0.28□□□□□ -2.36
SIMC1Q8NDZ2 RNU6-520P-201ENST00000384717 104 ntBASIC0.28□□□□□ -2.36
SIMC1Q8NDZ2 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.28□□□□□ -2.36
SIMC1Q8NDZ2 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
SIMC1Q8NDZ2 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
SIMC1Q8NDZ2 SNORD115-23-201ENST00000364461 82 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 RNA5SP163-201ENST00000410304 99 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 RNU7-88P-201ENST00000458752 63 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 RNU7-119P-201ENST00000459279 63 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 RNU6-180P-201ENST00000516697 61 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 CR383656.4-201ENST00000546909 122 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 MIR7110-201ENST00000612638 86 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 snoR1.1-201ENST00000628177 80 ntBASIC0.27□□□□□ -2.37
SIMC1Q8NDZ2 MIR6759-201ENST00000638110 65 ntBASIC0.26□□□□□ -2.37
SIMC1Q8NDZ2 RNU6-598P-201ENST00000364017 105 ntBASIC0.25□□□□□ -2.37
SIMC1Q8NDZ2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
SIMC1Q8NDZ2 Y_RNA.698-201ENST00000516798 118 ntBASIC0.25□□□□□ -2.37
SIMC1Q8NDZ2 MIR5704-201ENST00000584029 77 ntBASIC0.25□□□□□ -2.37
SIMC1Q8NDZ2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.25□□□□□ -2.37
SIMC1Q8NDZ2 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 MIR610-201ENST00000385139 96 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 SNORA40B-201ENST00000385573 128 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 RNU6-808P-201ENST00000391233 108 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 MIR892B-201ENST00000401279 77 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 RNU4-88P-201ENST00000411220 86 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 MIR4490-201ENST00000582647 84 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 AC108676.2-201ENST00000605225 163 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 MIR6507-201ENST00000613630 70 ntBASIC0.24□□□□□ -2.37
SIMC1Q8NDZ2 RNU6-753P-201ENST00000363926 107 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 Y_RNA.379-201ENST00000365653 102 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 RNU6-455P-201ENST00000384681 107 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 RNU6-1133P-201ENST00000410963 100 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 RNU7-55P-201ENST00000459426 62 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 MIR4464-201ENST00000580818 92 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 MIR6888-201ENST00000621977 67 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 AL391099.1-201ENST00000624635 187 ntBASIC0.23□□□□□ -2.37
SIMC1Q8NDZ2 MIR429-201ENST00000362106 83 ntBASIC0.22□□□□□ -2.37
SIMC1Q8NDZ2 MIR148A-201ENST00000362215 68 ntBASIC0.22□□□□□ -2.37
SIMC1Q8NDZ2 RNU7-151P-201ENST00000516930 53 ntBASIC0.22□□□□□ -2.37
SIMC1Q8NDZ2 U7.5-201ENST00000517224 61 ntBASIC0.22□□□□□ -2.37
SIMC1Q8NDZ2 MIR8068-201ENST00000618032 68 ntBASIC0.22□□□□□ -2.37
SIMC1Q8NDZ2 RNU6-900P-201ENST00000384498 102 ntBASIC0.21□□□□□ -2.38
SIMC1Q8NDZ2 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
SIMC1Q8NDZ2 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.21□□□□□ -2.38
SIMC1Q8NDZ2 RNU6-1262P-201ENST00000516217 96 ntBASIC0.21□□□□□ -2.38
SIMC1Q8NDZ2 RNU6-980P-201ENST00000516925 103 ntBASIC0.21□□□□□ -2.38
SIMC1Q8NDZ2 MIR4743-201ENST00000584576 69 ntBASIC0.21□□□□□ -2.38
SIMC1Q8NDZ2 SNORD114-5-201ENST00000362928 70 ntBASIC0.2□□□□□ -2.38
SIMC1Q8NDZ2 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
SIMC1Q8NDZ2 SNORA42.1-201ENST00000363515 137 ntBASIC0.2□□□□□ -2.38
SIMC1Q8NDZ2 AL445193.1-201ENST00000441183 141 ntBASIC0.2□□□□□ -2.38
SIMC1Q8NDZ2 MIR4636-201ENST00000582271 80 ntBASIC0.2□□□□□ -2.38
SIMC1Q8NDZ2 MIR6718-201ENST00000616153 80 ntBASIC0.2□□□□□ -2.38
SIMC1Q8NDZ2 AL445584.3-201ENST00000617173 78 ntBASIC0.2□□□□□ -2.38
SIMC1Q8NDZ2 RNU6-973P-201ENST00000364690 107 ntBASIC0.19□□□□□ -2.38
SIMC1Q8NDZ2 RNU6-1267P-201ENST00000410747 107 ntBASIC0.19□□□□□ -2.38
SIMC1Q8NDZ2 RNU7-165P-201ENST00000458864 60 ntBASIC0.19□□□□□ -2.38
SIMC1Q8NDZ2 MIR5190-201ENST00000581537 80 ntBASIC0.19□□□□□ -2.38
SIMC1Q8NDZ2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.19□□□□□ -2.38
SIMC1Q8NDZ2 RNU4-33P-201ENST00000364316 85 ntBASIC0.18□□□□□ -2.38
SIMC1Q8NDZ2 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
SIMC1Q8NDZ2 RNU6-901P-201ENST00000384593 106 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms