Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNA5SP163-201ENST00000410304 99 ntBASIC0.21□□□□□ -2.38
SLC44A3Q8N4M1 RNU7-154P-201ENST00000516194 62 ntBASIC0.21□□□□□ -2.38
SLC44A3Q8N4M1 Y_RNA.185-201ENST00000363894 100 ntBASIC0.2□□□□□ -2.38
SLC44A3Q8N4M1 MIR892B-201ENST00000401279 77 ntBASIC0.2□□□□□ -2.38
SLC44A3Q8N4M1 MIR6507-201ENST00000613630 70 ntBASIC0.2□□□□□ -2.38
SLC44A3Q8N4M1 SNORA25.5-201ENST00000363782 126 ntBASIC0.19□□□□□ -2.38
SLC44A3Q8N4M1 Y_RNA.246-201ENST00000364495 108 ntBASIC0.19□□□□□ -2.38
SLC44A3Q8N4M1 Y_RNA.325-201ENST00000365171 122 ntBASIC0.19□□□□□ -2.38
SLC44A3Q8N4M1 RNU7-55P-201ENST00000459426 62 ntBASIC0.19□□□□□ -2.38
SLC44A3Q8N4M1 MIR548AG1-201ENST00000579932 66 ntBASIC0.19□□□□□ -2.38
SLC44A3Q8N4M1 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
SLC44A3Q8N4M1 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
SLC44A3Q8N4M1 MIR610-201ENST00000385139 96 ntBASIC0.18□□□□□ -2.38
SLC44A3Q8N4M1 RNU7-165P-201ENST00000458864 60 ntBASIC0.18□□□□□ -2.38
SLC44A3Q8N4M1 RNA5SP470-201ENST00000516463 106 ntBASIC0.18□□□□□ -2.38
SLC44A3Q8N4M1 RNU6-92P-201ENST00000605893 104 ntBASIC0.18□□□□□ -2.38
SLC44A3Q8N4M1 RNA5SP214-201ENST00000363378 118 ntBASIC0.17□□□□□ -2.38
SLC44A3Q8N4M1 RNA5SP192-201ENST00000364404 120 ntBASIC0.17□□□□□ -2.38
SLC44A3Q8N4M1 RNU6-30P-201ENST00000384561 107 ntBASIC0.17□□□□□ -2.38
SLC44A3Q8N4M1 MIR593-201ENST00000384856 100 ntBASIC0.17□□□□□ -2.38
SLC44A3Q8N4M1 SNORD113-2-201ENST00000391082 72 ntBASIC0.17□□□□□ -2.38
SLC44A3Q8N4M1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.17□□□□□ -2.38
SLC44A3Q8N4M1 MIR4768-201ENST00000585270 74 ntBASIC0.16□□□□□ -2.38
SLC44A3Q8N4M1 SNORD114-5-201ENST00000362928 70 ntBASIC0.15□□□□□ -2.39
SLC44A3Q8N4M1 AC244250.2-201ENST00000418731 148 ntBASIC0.15□□□□□ -2.39
SLC44A3Q8N4M1 Z95118.1-201ENST00000421372 247 ntBASIC0.15□□□□□ -2.39
SLC44A3Q8N4M1 RNU6-122P-201ENST00000516818 107 ntBASIC0.15□□□□□ -2.39
SLC44A3Q8N4M1 SNORD60.1-201ENST00000362451 73 ntBASIC0.14□□□□□ -2.39
SLC44A3Q8N4M1 Y_RNA.74-201ENST00000362911 99 ntBASIC0.14□□□□□ -2.39
SLC44A3Q8N4M1 RNU6-900P-201ENST00000384498 102 ntBASIC0.14□□□□□ -2.39
SLC44A3Q8N4M1 AL353803.5-201ENST00000599815 141 ntBASIC0.14□□□□□ -2.39
SLC44A3Q8N4M1 RNU6-455P-201ENST00000384681 107 ntBASIC0.13□□□□□ -2.39
SLC44A3Q8N4M1 SNORA41B-201ENST00000384785 128 ntBASIC0.13□□□□□ -2.39
SLC44A3Q8N4M1 RNU7-159P-201ENST00000459284 62 ntBASIC0.13□□□□□ -2.39
SLC44A3Q8N4M1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.13□□□□□ -2.39
SLC44A3Q8N4M1 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
SLC44A3Q8N4M1 MIR655-201ENST00000362159 97 ntBASIC0.12□□□□□ -2.39
SLC44A3Q8N4M1 RNU6-973P-201ENST00000364690 107 ntBASIC0.12□□□□□ -2.39
SLC44A3Q8N4M1 Y_RNA.282-201ENST00000364793 102 ntBASIC0.12□□□□□ -2.39
SLC44A3Q8N4M1 RNA5SP25-201ENST00000410815 110 ntBASIC0.12□□□□□ -2.39
SLC44A3Q8N4M1 MIR4432-201ENST00000581823 84 ntBASIC0.12□□□□□ -2.39
SLC44A3Q8N4M1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.12□□□□□ -2.39
SLC44A3Q8N4M1 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
SLC44A3Q8N4M1 AC096531.1-201ENST00000419107 107 ntBASIC0.11□□□□□ -2.39
SLC44A3Q8N4M1 MIR4464-201ENST00000580818 92 ntBASIC0.11□□□□□ -2.39
SLC44A3Q8N4M1 RNU6-940P-201ENST00000363433 104 ntBASIC0.1□□□□□ -2.39
SLC44A3Q8N4M1 Y_RNA.698-201ENST00000516798 118 ntBASIC0.1□□□□□ -2.39
SLC44A3Q8N4M1 MIR4290-201ENST00000583807 95 ntBASIC0.1□□□□□ -2.39
SLC44A3Q8N4M1 AL391099.1-201ENST00000624635 187 ntBASIC0.1□□□□□ -2.39
SLC44A3Q8N4M1 SNORD116-16-201ENST00000384533 92 ntBASIC0.09□□□□□ -2.4
SLC44A3Q8N4M1 RNU6-758P-201ENST00000516292 89 ntBASIC0.09□□□□□ -2.4
SLC44A3Q8N4M1 IGLVI-20-201ENST00000519296 130 ntBASIC0.09□□□□□ -2.4
SLC44A3Q8N4M1 SNORD114-31-201ENST00000363219 75 ntBASIC0.08□□□□□ -2.4
SLC44A3Q8N4M1 RNU6-929P-201ENST00000384429 107 ntBASIC0.08□□□□□ -2.4
SLC44A3Q8N4M1 SNORD56B-201ENST00000384713 71 ntBASIC0.08□□□□□ -2.4
SLC44A3Q8N4M1 RNA5SP368-201ENST00000364298 116 ntBASIC0.07□□□□□ -2.4
SLC44A3Q8N4M1 MIR466-201ENST00000580653 84 ntBASIC0.07□□□□□ -2.4
SLC44A3Q8N4M1 uc_338.36-201ENST00000622331 158 ntBASIC0.06□□□□□ -2.4
SLC44A3Q8N4M1 snoR1.1-201ENST00000628177 80 ntBASIC0.06□□□□□ -2.4
SLC44A3Q8N4M1 RNU6-46P-201ENST00000383860 107 ntBASIC0.05□□□□□ -2.4
SLC44A3Q8N4M1 RNU6-246P-201ENST00000384702 107 ntBASIC0.05□□□□□ -2.4
SLC44A3Q8N4M1 MIR6888-201ENST00000621977 67 ntBASIC0.05□□□□□ -2.4
SLC44A3Q8N4M1 SNORD114-15-201ENST00000364687 72 ntBASIC0.04□□□□□ -2.4
SLC44A3Q8N4M1 MIR527-201ENST00000385244 85 ntBASIC0.04□□□□□ -2.4
SLC44A3Q8N4M1 RNU6-1133P-201ENST00000410963 100 ntBASIC0.04□□□□□ -2.4
SLC44A3Q8N4M1 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.4
SLC44A3Q8N4M1 MIR4493-201ENST00000584016 73 ntBASIC0.03□□□□□ -2.4
SLC44A3Q8N4M1 MIR5704-201ENST00000584029 77 ntBASIC0.03□□□□□ -2.4
SLC44A3Q8N4M1 AP001180.6-201ENST00000584918 159 ntBASIC0.03□□□□□ -2.4
SLC44A3Q8N4M1 AL445584.3-201ENST00000617173 78 ntBASIC0.03□□□□□ -2.4
SLC44A3Q8N4M1 Y_RNA.109-201ENST00000363215 102 ntBASIC0.02□□□□□ -2.41
SLC44A3Q8N4M1 SNORD49B-201ENST00000365172 72 ntBASIC0.02□□□□□ -2.41
SLC44A3Q8N4M1 SNORA62.4-201ENST00000365504 151 ntBASIC0.02□□□□□ -2.41
SLC44A3Q8N4M1 RNU6-458P-201ENST00000384179 107 ntBASIC0.02□□□□□ -2.41
SLC44A3Q8N4M1 MIR3938-201ENST00000582157 103 ntBASIC0.02□□□□□ -2.41
SLC44A3Q8N4M1 AC108676.2-201ENST00000605225 163 ntBASIC0.02□□□□□ -2.41
SLC44A3Q8N4M1 U6.58-201ENST00000613107 107 ntBASIC0.02□□□□□ -2.41
SLC44A3Q8N4M1 MIR8068-201ENST00000618032 68 ntBASIC0.02□□□□□ -2.41
SLC44A3Q8N4M1 RNU6-1079P-201ENST00000362861 110 ntBASIC0.01□□□□□ -2.41
SLC44A3Q8N4M1 MIR633-201ENST00000384821 98 ntBASIC0.01□□□□□ -2.41
SLC44A3Q8N4M1 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
SLC44A3Q8N4M1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.01□□□□□ -2.41
SLC44A3Q8N4M1 RNA5SP331-201ENST00000364986 107 ntBASIC0□□□□□ -2.41
SLC44A3Q8N4M1 RNU6-499P-201ENST00000365615 107 ntBASIC0□□□□□ -2.41
SLC44A3Q8N4M1 MIR604-201ENST00000384880 94 ntBASIC0□□□□□ -2.41
SLC44A3Q8N4M1 AC079150.2-201ENST00000443733 78 ntBASIC0□□□□□ -2.41
SLC44A3Q8N4M1 AC114755.3-201ENST00000481111 251 ntBASIC0□□□□□ -2.41
SLC44A3Q8N4M1 RNU6-446P-201ENST00000362827 106 ntBASIC-0.01□□□□□ -2.41
SLC44A3Q8N4M1 SNORD1B-201ENST00000363091 84 ntBASIC-0.01□□□□□ -2.41
SLC44A3Q8N4M1 AC104692.1-201ENST00000472406 90 ntBASIC-0.01□□□□□ -2.41
SLC44A3Q8N4M1 AL590491.3-201ENST00000610731 82 ntBASIC-0.01□□□□□ -2.41
SLC44A3Q8N4M1 MIR6854-201ENST00000614935 69 ntBASIC-0.01□□□□□ -2.41
SLC44A3Q8N4M1 RNU6-829P-201ENST00000363700 112 ntBASIC-0.02□□□□□ -2.41
SLC44A3Q8N4M1 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.02□□□□□ -2.41
SLC44A3Q8N4M1 MIR4280-201ENST00000582178 76 ntBASIC-0.02□□□□□ -2.41
SLC44A3Q8N4M1 RNA5SP67-201ENST00000516422 131 ntBASIC-0.03□□□□□ -2.41
SLC44A3Q8N4M1 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.04□□□□□ -2.42
SLC44A3Q8N4M1 RNU6-231P-201ENST00000517122 103 ntBASIC-0.04□□□□□ -2.42
SLC44A3Q8N4M1 MIR429-201ENST00000362106 83 ntBASIC-0.05□□□□□ -2.42
SLC44A3Q8N4M1 RNU6-901P-201ENST00000384593 106 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 225.2 ms