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Protein–RNA interactions for Protein: Q8N205
SYNE4, Nesprin-4, human
Predictions only
Length
404 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
SYNE4
Q8N205
SNORD115-23-201
ENST00000364461
82 nt
BASIC
0.29
□□□□□ -2.36
SYNE4
Q8N205
MIR593-201
ENST00000384856
100 nt
BASIC
0.29
□□□□□ -2.36
SYNE4
Q8N205
uc_338.36-201
ENST00000622331
158 nt
BASIC
0.29
□□□□□ -2.36
SYNE4
Q8N205
KIF20B-201
ENST00000260753
6306 nt
APPRIS P3
TSL 1 (best)
BASIC
0.28
□□□□□ -2.36
SYNE4
Q8N205
RNU6ATAC29P-201
ENST00000408088
125 nt
BASIC
0.28
□□□□□ -2.36
SYNE4
Q8N205
AC104408.1-201
ENST00000605241
170 nt
BASIC
0.28
□□□□□ -2.36
SYNE4
Q8N205
MIR6507-201
ENST00000613630
70 nt
BASIC
0.28
□□□□□ -2.36
SYNE4
Q8N205
RNU6-446P-201
ENST00000362827
106 nt
BASIC
0.27
□□□□□ -2.37
SYNE4
Q8N205
RNA5SP98-201
ENST00000363158
137 nt
BASIC
0.27
□□□□□ -2.37
SYNE4
Q8N205
Y_RNA.282-201
ENST00000364793
102 nt
BASIC
0.27
□□□□□ -2.37
SYNE4
Q8N205
AL353803.5-201
ENST00000599815
141 nt
BASIC
0.27
□□□□□ -2.37
SYNE4
Q8N205
RNU6-829P-201
ENST00000363700
112 nt
BASIC
0.26
□□□□□ -2.37
SYNE4
Q8N205
RNU6-499P-201
ENST00000365615
107 nt
BASIC
0.26
□□□□□ -2.37
SYNE4
Q8N205
snoU13.19-201
ENST00000459148
104 nt
BASIC
0.26
□□□□□ -2.37
SYNE4
Q8N205
RNU6-180P-201
ENST00000516697
61 nt
BASIC
0.26
□□□□□ -2.37
SYNE4
Q8N205
Y_RNA.74-201
ENST00000362911
99 nt
BASIC
0.25
□□□□□ -2.37
SYNE4
Q8N205
RNU6-940P-201
ENST00000363433
104 nt
BASIC
0.25
□□□□□ -2.37
SYNE4
Q8N205
AC079150.2-201
ENST00000443733
78 nt
BASIC
0.25
□□□□□ -2.37
SYNE4
Q8N205
AC008883.1-201
ENST00000506562
193 nt
TSL 3
BASIC
0.25
□□□□□ -2.37
SYNE4
Q8N205
RNU7-154P-201
ENST00000516194
62 nt
BASIC
0.25
□□□□□ -2.37
SYNE4
Q8N205
SNORD114-5-201
ENST00000362928
70 nt
BASIC
0.24
□□□□□ -2.37
SYNE4
Q8N205
Y_RNA.698-201
ENST00000516798
118 nt
BASIC
0.24
□□□□□ -2.37
SYNE4
Q8N205
MIR4315-1-201
ENST00000636800
73 nt
BASIC
0.24
□□□□□ -2.37
SYNE4
Q8N205
MIR4315-2-201
ENST00000640925
73 nt
BASIC
0.24
□□□□□ -2.37
SYNE4
Q8N205
MIR145-201
ENST00000384967
88 nt
BASIC
0.23
□□□□□ -2.37
SYNE4
Q8N205
CR383656.4-201
ENST00000546909
122 nt
BASIC
0.23
□□□□□ -2.37
SYNE4
Q8N205
MIR4464-201
ENST00000580818
92 nt
BASIC
0.23
□□□□□ -2.37
SYNE4
Q8N205
MIR5093-201
ENST00000583199
100 nt
BASIC
0.23
□□□□□ -2.37
SYNE4
Q8N205
RNA5SP214-201
ENST00000363378
118 nt
BASIC
0.22
□□□□□ -2.37
SYNE4
Q8N205
AC244250.2-201
ENST00000418731
148 nt
BASIC
0.22
□□□□□ -2.37
SYNE4
Q8N205
RNU7-55P-201
ENST00000459426
62 nt
BASIC
0.22
□□□□□ -2.37
SYNE4
Q8N205
MIR5704-201
ENST00000584029
77 nt
BASIC
0.22
□□□□□ -2.37
SYNE4
Q8N205
Y_RNA.109-201
ENST00000363215
102 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
SNORA42.1-201
ENST00000363515
137 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
SNORD113-4-201
ENST00000364802
75 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
SNORD116-16-201
ENST00000384533
92 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
RNU6-455P-201
ENST00000384681
107 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
RNU6-246P-201
ENST00000384702
107 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
MIR527-201
ENST00000385244
85 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
RNA5SP470-201
ENST00000516463
106 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
MIR3938-201
ENST00000582157
103 nt
BASIC
0.21
□□□□□ -2.38
SYNE4
Q8N205
SNORD114-9-201
ENST00000364370
72 nt
BASIC
0.2
□□□□□ -2.38
SYNE4
Q8N205
RNA5SP25-201
ENST00000410815
110 nt
BASIC
0.2
□□□□□ -2.38
SYNE4
Q8N205
MIR4432-201
ENST00000581823
84 nt
BASIC
0.2
□□□□□ -2.38
SYNE4
Q8N205
MIR8068-201
ENST00000618032
68 nt
BASIC
0.2
□□□□□ -2.38
SYNE4
Q8N205
MIR6888-201
ENST00000621977
67 nt
BASIC
0.2
□□□□□ -2.38
SYNE4
Q8N205
AL391099.1-201
ENST00000624635
187 nt
BASIC
0.2
□□□□□ -2.38
SYNE4
Q8N205
Y_RNA.185-201
ENST00000363894
100 nt
BASIC
0.19
□□□□□ -2.38
SYNE4
Q8N205
RNU6ATAC22P-201
ENST00000516794
89 nt
BASIC
0.19
□□□□□ -2.38
SYNE4
Q8N205
HOTAIRM1_3.1-201
ENST00000619974
59 nt
BASIC
0.19
□□□□□ -2.38
SYNE4
Q8N205
MIR655-201
ENST00000362159
97 nt
BASIC
0.18
□□□□□ -2.38
SYNE4
Q8N205
MIR148A-201
ENST00000362215
68 nt
BASIC
0.18
□□□□□ -2.38
SYNE4
Q8N205
RNU6-30P-201
ENST00000384561
107 nt
BASIC
0.18
□□□□□ -2.38
SYNE4
Q8N205
SNORD56B-201
ENST00000384713
71 nt
BASIC
0.18
□□□□□ -2.38
SYNE4
Q8N205
MIR610-201
ENST00000385139
96 nt
BASIC
0.18
□□□□□ -2.38
SYNE4
Q8N205
MIR1295A-201
ENST00000408463
79 nt
BASIC
0.18
□□□□□ -2.38
SYNE4
Q8N205
RNU7-165P-201
ENST00000458864
60 nt
BASIC
0.18
□□□□□ -2.38
SYNE4
Q8N205
SNORD1B-201
ENST00000363091
84 nt
BASIC
0.17
□□□□□ -2.38
SYNE4
Q8N205
Y_RNA.236-201
ENST00000364427
111 nt
BASIC
0.17
□□□□□ -2.38
SYNE4
Q8N205
RNU6-458P-201
ENST00000384179
107 nt
BASIC
0.17
□□□□□ -2.38
SYNE4
Q8N205
RNU6-929P-201
ENST00000384429
107 nt
BASIC
0.17
□□□□□ -2.38
SYNE4
Q8N205
U6.58-201
ENST00000613107
107 nt
BASIC
0.17
□□□□□ -2.38
SYNE4
Q8N205
RNU6-973P-201
ENST00000364690
107 nt
BASIC
0.16
□□□□□ -2.38
SYNE4
Q8N205
RNU6-900P-201
ENST00000384498
102 nt
BASIC
0.16
□□□□□ -2.38
SYNE4
Q8N205
MTND4LP19-201
ENST00000403051
166 nt
BASIC
0.16
□□□□□ -2.38
SYNE4
Q8N205
snoR1.1-201
ENST00000628177
80 nt
BASIC
0.16
□□□□□ -2.38
SYNE4
Q8N205
AC096531.1-201
ENST00000419107
107 nt
BASIC
0.15
□□□□□ -2.39
SYNE4
Q8N205
RNU7-159P-201
ENST00000459284
62 nt
BASIC
0.15
□□□□□ -2.39
SYNE4
Q8N205
RNU6-231P-201
ENST00000517122
103 nt
BASIC
0.15
□□□□□ -2.39
SYNE4
Q8N205
MIR892B-201
ENST00000401279
77 nt
BASIC
0.14
□□□□□ -2.39
SYNE4
Q8N205
AC108676.2-201
ENST00000605225
163 nt
BASIC
0.14
□□□□□ -2.39
SYNE4
Q8N205
AL445584.3-201
ENST00000617173
78 nt
BASIC
0.14
□□□□□ -2.39
SYNE4
Q8N205
RNU6-1133P-201
ENST00000410963
100 nt
BASIC
0.13
□□□□□ -2.39
SYNE4
Q8N205
Z95118.1-201
ENST00000421372
247 nt
BASIC
0.13
□□□□□ -2.39
SYNE4
Q8N205
MIR4493-201
ENST00000584016
73 nt
BASIC
0.13
□□□□□ -2.39
SYNE4
Q8N205
U2.18-201
ENST00000622185
84 nt
BASIC
0.13
□□□□□ -2.39
SYNE4
Q8N205
RNU6-598P-201
ENST00000364017
105 nt
BASIC
0.12
□□□□□ -2.39
SYNE4
Q8N205
RNA5SP331-201
ENST00000364986
107 nt
BASIC
0.12
□□□□□ -2.39
SYNE4
Q8N205
RNU6-758P-201
ENST00000516292
89 nt
BASIC
0.12
□□□□□ -2.39
SYNE4
Q8N205
MIR4768-201
ENST00000585270
74 nt
BASIC
0.12
□□□□□ -2.39
SYNE4
Q8N205
RNU6-1312P-201
ENST00000362425
108 nt
BASIC
0.11
□□□□□ -2.39
SYNE4
Q8N205
MIR4743-201
ENST00000584576
69 nt
BASIC
0.11
□□□□□ -2.39
SYNE4
Q8N205
RNU6-172P-201
ENST00000411000
93 nt
BASIC
0.1
□□□□□ -2.39
SYNE4
Q8N205
RNU7-88P-201
ENST00000458752
63 nt
BASIC
0.1
□□□□□ -2.39
SYNE4
Q8N205
AC114755.3-201
ENST00000481111
251 nt
BASIC
0.1
□□□□□ -2.39
SYNE4
Q8N205
Clostridiales-1.4-201
ENST00000636807
150 nt
BASIC
0.1
□□□□□ -2.39
SYNE4
Q8N205
SNORD116.2-201
ENST00000391251
93 nt
BASIC
0.09
□□□□□ -2.4
SYNE4
Q8N205
AL445193.1-201
ENST00000441183
141 nt
BASIC
0.09
□□□□□ -2.4
SYNE4
Q8N205
U7.5-201
ENST00000517224
61 nt
BASIC
0.09
□□□□□ -2.4
SYNE4
Q8N205
SNORA40.16-201
ENST00000517238
121 nt
BASIC
0.09
□□□□□ -2.4
SYNE4
Q8N205
MIR4667-201
ENST00000578933
66 nt
BASIC
0.09
□□□□□ -2.4
SYNE4
Q8N205
AP001180.6-201
ENST00000584918
159 nt
BASIC
0.09
□□□□□ -2.4
SYNE4
Q8N205
SNORD114-31-201
ENST00000363219
75 nt
BASIC
0.08
□□□□□ -2.4
SYNE4
Q8N205
IGLVI-20-201
ENST00000519296
130 nt
BASIC
0.08
□□□□□ -2.4
SYNE4
Q8N205
RNA5SP368-201
ENST00000364298
116 nt
BASIC
0.07
□□□□□ -2.4
SYNE4
Q8N205
MIR4280-201
ENST00000582178
76 nt
BASIC
0.07
□□□□□ -2.4
SYNE4
Q8N205
MIR579-201
ENST00000385221
98 nt
BASIC
0.06
□□□□□ -2.4
SYNE4
Q8N205
MIR4290-201
ENST00000583807
95 nt
BASIC
0.06
□□□□□ -2.4
SYNE4
Q8N205
MIR6854-201
ENST00000614935
69 nt
BASIC
0.06
□□□□□ -2.4
SYNE4
Q8N205
MIR7978-201
ENST00000636158
59 nt
BASIC
0.06
□□□□□ -2.4
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Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms