Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL353803.5-201ENST00000599815 141 ntBASIC0.31□□□□□ -2.36
VRK3Q8IV63 U6.59-201ENST00000615686 107 ntBASIC0.31□□□□□ -2.36
VRK3Q8IV63 SNORD113-4-201ENST00000364802 75 ntBASIC0.3□□□□□ -2.36
VRK3Q8IV63 SNORA62.5-201ENST00000516634 120 ntBASIC0.3□□□□□ -2.36
VRK3Q8IV63 MIR148A-201ENST00000362215 68 ntBASIC0.29□□□□□ -2.36
VRK3Q8IV63 MIR643-201ENST00000385267 97 ntBASIC0.29□□□□□ -2.36
VRK3Q8IV63 MIR892B-201ENST00000401279 77 ntBASIC0.29□□□□□ -2.36
VRK3Q8IV63 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.29□□□□□ -2.36
VRK3Q8IV63 MIR6507-201ENST00000613630 70 ntBASIC0.29□□□□□ -2.36
VRK3Q8IV63 MIR6514-201ENST00000622549 70 ntBASIC0.29□□□□□ -2.36
VRK3Q8IV63 RNU6-900P-201ENST00000384498 102 ntBASIC0.28□□□□□ -2.36
VRK3Q8IV63 MIR4432-201ENST00000581823 84 ntBASIC0.28□□□□□ -2.36
VRK3Q8IV63 RNA5SP257-201ENST00000363023 116 ntBASIC0.27□□□□□ -2.37
VRK3Q8IV63 Y_RNA.109-201ENST00000363215 102 ntBASIC0.27□□□□□ -2.37
VRK3Q8IV63 RNU6-246P-201ENST00000384702 107 ntBASIC0.27□□□□□ -2.37
VRK3Q8IV63 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
VRK3Q8IV63 RNU6-231P-201ENST00000517122 103 ntBASIC0.27□□□□□ -2.37
VRK3Q8IV63 SNORA42.1-201ENST00000363515 137 ntBASIC0.26□□□□□ -2.37
VRK3Q8IV63 RNU7-119P-201ENST00000459279 63 ntBASIC0.26□□□□□ -2.37
VRK3Q8IV63 Y_RNA.698-201ENST00000516798 118 ntBASIC0.26□□□□□ -2.37
VRK3Q8IV63 MIR4464-201ENST00000580818 92 ntBASIC0.26□□□□□ -2.37
VRK3Q8IV63 RNU6-973P-201ENST00000364690 107 ntBASIC0.25□□□□□ -2.37
VRK3Q8IV63 RNU6-458P-201ENST00000384179 107 ntBASIC0.25□□□□□ -2.37
VRK3Q8IV63 RNA5SP163-201ENST00000410304 99 ntBASIC0.25□□□□□ -2.37
VRK3Q8IV63 RNU7-165P-201ENST00000458864 60 ntBASIC0.25□□□□□ -2.37
VRK3Q8IV63 U6.58-201ENST00000613107 107 ntBASIC0.25□□□□□ -2.37
VRK3Q8IV63 AC096531.1-201ENST00000419107 107 ntBASIC0.24□□□□□ -2.37
VRK3Q8IV63 MIR2909-201ENST00000617113 69 ntBASIC0.24□□□□□ -2.37
VRK3Q8IV63 AL391099.1-201ENST00000624635 187 ntBASIC0.24□□□□□ -2.37
VRK3Q8IV63 MIR429-201ENST00000362106 83 ntBASIC0.23□□□□□ -2.37
VRK3Q8IV63 SNORA62.4-201ENST00000365504 151 ntBASIC0.23□□□□□ -2.37
VRK3Q8IV63 MIR610-201ENST00000385139 96 ntBASIC0.23□□□□□ -2.37
VRK3Q8IV63 SNORD1B-201ENST00000363091 84 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 RNA5SP214-201ENST00000363378 118 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 SNORD114-9-201ENST00000364370 72 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 RNU6-455P-201ENST00000384681 107 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 AC108676.2-201ENST00000605225 163 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 AC104408.1-201ENST00000605241 170 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 MIR7110-201ENST00000612638 86 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 MIR6888-201ENST00000621977 67 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 snoR1.1-201ENST00000628177 80 ntBASIC0.22□□□□□ -2.37
VRK3Q8IV63 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.21□□□□□ -2.38
VRK3Q8IV63 MIR655-201ENST00000362159 97 ntBASIC0.21□□□□□ -2.38
VRK3Q8IV63 Y_RNA.68-201ENST00000362881 102 ntBASIC0.21□□□□□ -2.38
VRK3Q8IV63 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
VRK3Q8IV63 RNA5SP63-201ENST00000391225 112 ntBASIC0.21□□□□□ -2.38
VRK3Q8IV63 MIR1295A-201ENST00000408463 79 ntBASIC0.21□□□□□ -2.38
VRK3Q8IV63 RNU6-141P-201ENST00000410499 105 ntBASIC0.21□□□□□ -2.38
VRK3Q8IV63 AC023932.2-201ENST00000603176 175 ntBASIC0.21□□□□□ -2.38
VRK3Q8IV63 RNU6-598P-201ENST00000364017 105 ntBASIC0.2□□□□□ -2.38
VRK3Q8IV63 MIR593-201ENST00000384856 100 ntBASIC0.2□□□□□ -2.38
VRK3Q8IV63 RNU6-1133P-201ENST00000410963 100 ntBASIC0.2□□□□□ -2.38
VRK3Q8IV63 SNORA40.16-201ENST00000517238 121 ntBASIC0.2□□□□□ -2.38
VRK3Q8IV63 AL445584.3-201ENST00000617173 78 ntBASIC0.2□□□□□ -2.38
VRK3Q8IV63 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
VRK3Q8IV63 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
VRK3Q8IV63 AC244250.2-201ENST00000418731 148 ntBASIC0.18□□□□□ -2.38
VRK3Q8IV63 uc_338.36-201ENST00000622331 158 ntBASIC0.18□□□□□ -2.38
VRK3Q8IV63 MIR7978-201ENST00000636158 59 ntBASIC0.18□□□□□ -2.38
VRK3Q8IV63 RNU6-1312P-201ENST00000362425 108 ntBASIC0.17□□□□□ -2.38
VRK3Q8IV63 SNORA40B-201ENST00000385573 128 ntBASIC0.17□□□□□ -2.38
VRK3Q8IV63 RNU6-172P-201ENST00000411000 93 ntBASIC0.17□□□□□ -2.38
VRK3Q8IV63 SNORD116.2-201ENST00000391251 93 ntBASIC0.16□□□□□ -2.38
VRK3Q8IV63 RNU7-159P-201ENST00000459284 62 ntBASIC0.16□□□□□ -2.38
VRK3Q8IV63 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.16□□□□□ -2.38
VRK3Q8IV63 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
VRK3Q8IV63 Y_RNA.178-201ENST00000363832 102 ntBASIC0.15□□□□□ -2.39
VRK3Q8IV63 RNU6-1184P-201ENST00000384588 108 ntBASIC0.15□□□□□ -2.39
VRK3Q8IV63 SNORD56B-201ENST00000384713 71 ntBASIC0.15□□□□□ -2.39
VRK3Q8IV63 Y_RNA.722-201ENST00000517279 114 ntBASIC0.15□□□□□ -2.39
VRK3Q8IV63 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.15□□□□□ -2.39
VRK3Q8IV63 RNU6-810P-201ENST00000364001 107 ntBASIC0.14□□□□□ -2.39
VRK3Q8IV63 RNU6-46P-201ENST00000383860 107 ntBASIC0.13□□□□□ -2.39
VRK3Q8IV63 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
VRK3Q8IV63 RNU6-696P-201ENST00000390834 107 ntBASIC0.13□□□□□ -2.39
VRK3Q8IV63 RNU6-808P-201ENST00000391233 108 ntBASIC0.13□□□□□ -2.39
VRK3Q8IV63 AC114755.3-201ENST00000481111 251 ntBASIC0.13□□□□□ -2.39
VRK3Q8IV63 RNU6-1262P-201ENST00000516217 96 ntBASIC0.13□□□□□ -2.39
VRK3Q8IV63 MIR5704-201ENST00000584029 77 ntBASIC0.13□□□□□ -2.39
VRK3Q8IV63 MIR6854-201ENST00000614935 69 ntBASIC0.13□□□□□ -2.39
VRK3Q8IV63 MIR8068-201ENST00000618032 68 ntBASIC0.13□□□□□ -2.39
VRK3Q8IV63 Y_RNA.613-201ENST00000410726 97 ntBASIC0.12□□□□□ -2.39
VRK3Q8IV63 RNU6-980P-201ENST00000516925 103 ntBASIC0.12□□□□□ -2.39
VRK3Q8IV63 MIR4280-201ENST00000582178 76 ntBASIC0.12□□□□□ -2.39
VRK3Q8IV63 MIR4490-201ENST00000582647 84 ntBASIC0.12□□□□□ -2.39
VRK3Q8IV63 MIR4290-201ENST00000583807 95 ntBASIC0.12□□□□□ -2.39
VRK3Q8IV63 U2.18-201ENST00000622185 84 ntBASIC0.12□□□□□ -2.39
VRK3Q8IV63 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.11□□□□□ -2.39
VRK3Q8IV63 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
VRK3Q8IV63 RNU6-936P-201ENST00000384005 107 ntBASIC0.11□□□□□ -2.39
VRK3Q8IV63 Y_RNA.433-201ENST00000384089 102 ntBASIC0.11□□□□□ -2.39
VRK3Q8IV63 RNU7-160P-201ENST00000516660 62 ntBASIC0.11□□□□□ -2.39
VRK3Q8IV63 U7.5-201ENST00000517224 61 ntBASIC0.11□□□□□ -2.39
VRK3Q8IV63 RNU6-1174P-201ENST00000517278 101 ntBASIC0.11□□□□□ -2.39
VRK3Q8IV63 RNU6-924P-201ENST00000362926 108 ntBASIC0.1□□□□□ -2.39
VRK3Q8IV63 MIR371B-201ENST00000638082 66 ntBASIC0.1□□□□□ -2.39
VRK3Q8IV63 MIR548AA1-201ENST00000384971 97 ntBASIC0.09□□□□□ -2.4
VRK3Q8IV63 SNORD57-201ENST00000448188 72 ntBASIC0.09□□□□□ -2.4
VRK3Q8IV63 RNA5SP285-201ENST00000516619 119 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 229.6 ms