Protein–RNA interactions for Protein: Q5VIR6

VPS53, Vacuolar protein sorting-associated protein 53 homolog, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53Q5VIR6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.22□□□□□ -2.44
VPS53Q5VIR6 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.23□□□□□ -2.45
VPS53Q5VIR6 RNA5SP66-201ENST00000517178 101 ntBASIC-0.23□□□□□ -2.45
VPS53Q5VIR6 RNU6-698P-201ENST00000363523 107 ntBASIC-0.24□□□□□ -2.45
VPS53Q5VIR6 RNU6-34P-201ENST00000364874 107 ntBASIC-0.24□□□□□ -2.45
VPS53Q5VIR6 RNU6-302P-201ENST00000365249 107 ntBASIC-0.24□□□□□ -2.45
VPS53Q5VIR6 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.24□□□□□ -2.45
VPS53Q5VIR6 SNORD30.1-201ENST00000391309 70 ntBASIC-0.24□□□□□ -2.45
VPS53Q5VIR6 RNU6-539P-201ENST00000516665 103 ntBASIC-0.24□□□□□ -2.45
VPS53Q5VIR6 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.25□□□□□ -2.45
VPS53Q5VIR6 RNU6-649P-201ENST00000384463 107 ntBASIC-0.25□□□□□ -2.45
VPS53Q5VIR6 RNA5SP300-201ENST00000391197 107 ntBASIC-0.25□□□□□ -2.45
VPS53Q5VIR6 MIR329-2-201ENST00000385029 84 ntBASIC-0.26□□□□□ -2.45
VPS53Q5VIR6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
VPS53Q5VIR6 MIR4280-201ENST00000582178 76 ntBASIC-0.26□□□□□ -2.45
VPS53Q5VIR6 MIR6854-201ENST00000614935 69 ntBASIC-0.27□□□□□ -2.45
VPS53Q5VIR6 SNORA25.4-201ENST00000363666 124 ntBASIC-0.28□□□□□ -2.45
VPS53Q5VIR6 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.28□□□□□ -2.45
VPS53Q5VIR6 RNU6-630P-201ENST00000391258 106 ntBASIC-0.28□□□□□ -2.45
VPS53Q5VIR6 RNU6-542P-201ENST00000516405 103 ntBASIC-0.28□□□□□ -2.45
VPS53Q5VIR6 AC093726.3-201ENST00000637588 150 ntBASIC-0.28□□□□□ -2.45
VPS53Q5VIR6 MIR4788-201ENST00000639104 80 ntBASIC-0.28□□□□□ -2.45
VPS53Q5VIR6 AL445193.1-201ENST00000441183 141 ntBASIC-0.29□□□□□ -2.46
VPS53Q5VIR6 MIR5704-201ENST00000584029 77 ntBASIC-0.29□□□□□ -2.46
VPS53Q5VIR6 MIR548V-201ENST00000584165 80 ntBASIC-0.29□□□□□ -2.46
VPS53Q5VIR6 MIR6851-201ENST00000617060 67 ntBASIC-0.29□□□□□ -2.46
VPS53Q5VIR6 U6.111-201ENST00000636093 83 ntBASIC-0.29□□□□□ -2.46
VPS53Q5VIR6 U4.4-201ENST00000620626 117 ntBASIC-0.3□□□□□ -2.46
VPS53Q5VIR6 SNORD113-2-201ENST00000391082 72 ntBASIC-0.31□□□□□ -2.46
VPS53Q5VIR6 AC114755.3-201ENST00000481111 251 ntBASIC-0.31□□□□□ -2.46
VPS53Q5VIR6 MIR4464-201ENST00000580818 92 ntBASIC-0.31□□□□□ -2.46
VPS53Q5VIR6 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.32□□□□□ -2.46
VPS53Q5VIR6 AC114801.3-201ENST00000510231 177 ntBASIC-0.32□□□□□ -2.46
VPS53Q5VIR6 MIR630-201ENST00000384957 97 ntBASIC-0.33□□□□□ -2.46
VPS53Q5VIR6 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.33□□□□□ -2.46
VPS53Q5VIR6 RNA5SP285-201ENST00000516619 119 ntBASIC-0.33□□□□□ -2.46
VPS53Q5VIR6 AC005520.4-201ENST00000604337 90 ntBASIC-0.33□□□□□ -2.46
VPS53Q5VIR6 AL445584.3-201ENST00000617173 78 ntBASIC-0.33□□□□□ -2.46
VPS53Q5VIR6 MIR8068-201ENST00000618032 68 ntBASIC-0.33□□□□□ -2.46
VPS53Q5VIR6 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.34□□□□□ -2.46
VPS53Q5VIR6 AC108676.2-201ENST00000605225 163 ntBASIC-0.34□□□□□ -2.46
VPS53Q5VIR6 MIR6888-201ENST00000621977 67 ntBASIC-0.34□□□□□ -2.46
VPS53Q5VIR6 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.35□□□□□ -2.47
VPS53Q5VIR6 IGLVI-20-201ENST00000519296 130 ntBASIC-0.35□□□□□ -2.47
VPS53Q5VIR6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.35□□□□□ -2.47
VPS53Q5VIR6 SNORD74.6-201ENST00000364796 70 ntBASIC-0.36□□□□□ -2.47
VPS53Q5VIR6 RNU6-800P-201ENST00000384473 103 ntBASIC-0.36□□□□□ -2.47
VPS53Q5VIR6 SNORA13-201ENST00000458790 133 ntBASIC-0.36□□□□□ -2.47
VPS53Q5VIR6 SNORD38.3-201ENST00000516599 73 ntBASIC-0.36□□□□□ -2.47
VPS53Q5VIR6 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.36□□□□□ -2.47
VPS53Q5VIR6 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.37□□□□□ -2.47
VPS53Q5VIR6 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
VPS53Q5VIR6 MIR214-201ENST00000385214 110 ntBASIC-0.38□□□□□ -2.47
VPS53Q5VIR6 MIR548AG1-201ENST00000579932 66 ntBASIC-0.38□□□□□ -2.47
VPS53Q5VIR6 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.39□□□□□ -2.47
VPS53Q5VIR6 MIR518B-201ENST00000385127 83 ntBASIC-0.39□□□□□ -2.47
VPS53Q5VIR6 MIR4511-201ENST00000582784 87 ntBASIC-0.39□□□□□ -2.47
VPS53Q5VIR6 AC103706.3-201ENST00000636297 85 ntBASIC-0.39□□□□□ -2.47
VPS53Q5VIR6 MIR429-201ENST00000362106 83 ntBASIC-0.4□□□□□ -2.47
VPS53Q5VIR6 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
VPS53Q5VIR6 MIR204-201ENST00000385200 110 ntBASIC-0.4□□□□□ -2.47
VPS53Q5VIR6 MIR527-201ENST00000385244 85 ntBASIC-0.4□□□□□ -2.47
VPS53Q5VIR6 RNU6-924P-201ENST00000362926 108 ntBASIC-0.41□□□□□ -2.48
VPS53Q5VIR6 RNU6-92P-201ENST00000605893 104 ntBASIC-0.42□□□□□ -2.48
VPS53Q5VIR6 MIR124-2-201ENST00000385081 109 ntBASIC-0.43□□□□□ -2.48
VPS53Q5VIR6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
VPS53Q5VIR6 MIR6759-201ENST00000638110 65 ntBASIC-0.43□□□□□ -2.48
VPS53Q5VIR6 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.44□□□□□ -2.48
VPS53Q5VIR6 RNU6-458P-201ENST00000384179 107 ntBASIC-0.44□□□□□ -2.48
VPS53Q5VIR6 SNORD116-16-201ENST00000384533 92 ntBASIC-0.44□□□□□ -2.48
VPS53Q5VIR6 SNORD126-201ENST00000459475 77 ntBASIC-0.44□□□□□ -2.48
VPS53Q5VIR6 U6.58-201ENST00000613107 107 ntBASIC-0.44□□□□□ -2.48
VPS53Q5VIR6 SNORD114-31-201ENST00000363219 75 ntBASIC-0.45□□□□□ -2.48
VPS53Q5VIR6 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.45□□□□□ -2.48
VPS53Q5VIR6 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.45□□□□□ -2.48
VPS53Q5VIR6 RNU6-246P-201ENST00000384702 107 ntBASIC-0.45□□□□□ -2.48
VPS53Q5VIR6 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.45□□□□□ -2.48
VPS53Q5VIR6 RNA5SP169-201ENST00000517268 117 ntBASIC-0.45□□□□□ -2.48
VPS53Q5VIR6 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.46□□□□□ -2.48
VPS53Q5VIR6 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.46□□□□□ -2.48
VPS53Q5VIR6 SNORD22.1-201ENST00000516331 125 ntBASIC-0.46□□□□□ -2.48
VPS53Q5VIR6 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
VPS53Q5VIR6 MIR4645-201ENST00000583158 77 ntBASIC-0.46□□□□□ -2.48
VPS53Q5VIR6 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.47□□□□□ -2.48
VPS53Q5VIR6 RNU6-471P-201ENST00000383944 106 ntBASIC-0.47□□□□□ -2.48
VPS53Q5VIR6 SNORD75.1-201ENST00000408373 60 ntBASIC-0.47□□□□□ -2.48
VPS53Q5VIR6 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
VPS53Q5VIR6 MIR3179-1-201ENST00000578940 84 ntBASIC-0.47□□□□□ -2.48
VPS53Q5VIR6 MIR3179-2-201ENST00000579107 84 ntBASIC-0.47□□□□□ -2.48
VPS53Q5VIR6 MIR3179-3-201ENST00000579566 84 ntBASIC-0.47□□□□□ -2.48
VPS53Q5VIR6 MIR3179-4-201ENST00000617599 84 ntBASIC-0.47□□□□□ -2.48
VPS53Q5VIR6 SNORA25.5-201ENST00000363782 126 ntBASIC-0.48□□□□□ -2.49
VPS53Q5VIR6 RNU6-590P-201ENST00000365039 107 ntBASIC-0.48□□□□□ -2.49
VPS53Q5VIR6 SNORA41B-201ENST00000384785 128 ntBASIC-0.48□□□□□ -2.49
VPS53Q5VIR6 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.49□□□□□ -2.49
VPS53Q5VIR6 SNORD18.2-201ENST00000459604 70 ntBASIC-0.49□□□□□ -2.49
VPS53Q5VIR6 AC021146.6-201ENST00000514659 117 ntBASIC-0.49□□□□□ -2.49
VPS53Q5VIR6 SNORD60.1-201ENST00000362451 73 ntBASIC-0.51□□□□□ -2.49
VPS53Q5VIR6 SNORD114-14-201ENST00000362723 75 ntBASIC-0.51□□□□□ -2.49
VPS53Q5VIR6 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 309.8 ms