Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 MIR630-201ENST00000384957 97 ntBASIC-0.01□□□□□ -2.41
SF3B3Q15393 AC104692.1-201ENST00000472406 90 ntBASIC-0.01□□□□□ -2.41
SF3B3Q15393 RNA5SP285-201ENST00000516619 119 ntBASIC-0.01□□□□□ -2.41
SF3B3Q15393 MIR4432-201ENST00000581823 84 ntBASIC-0.01□□□□□ -2.41
SF3B3Q15393 MIR4511-201ENST00000582784 87 ntBASIC-0.01□□□□□ -2.41
SF3B3Q15393 AL353803.5-201ENST00000599815 141 ntBASIC-0.01□□□□□ -2.41
SF3B3Q15393 AL391099.1-201ENST00000624635 187 ntBASIC-0.01□□□□□ -2.41
SF3B3Q15393 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
SF3B3Q15393 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.02□□□□□ -2.41
SF3B3Q15393 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.03□□□□□ -2.41
SF3B3Q15393 AC096531.1-201ENST00000419107 107 ntBASIC-0.03□□□□□ -2.41
SF3B3Q15393 uc_338.36-201ENST00000622331 158 ntBASIC-0.03□□□□□ -2.41
SF3B3Q15393 snoR1.1-201ENST00000628177 80 ntBASIC-0.03□□□□□ -2.41
SF3B3Q15393 AC103706.3-201ENST00000636297 85 ntBASIC-0.03□□□□□ -2.41
SF3B3Q15393 SNORD49B-201ENST00000365172 72 ntBASIC-0.04□□□□□ -2.42
SF3B3Q15393 RNU6-471P-201ENST00000383944 106 ntBASIC-0.04□□□□□ -2.42
SF3B3Q15393 MIR329-2-201ENST00000385029 84 ntBASIC-0.04□□□□□ -2.42
SF3B3Q15393 SNORD113-2-201ENST00000391082 72 ntBASIC-0.04□□□□□ -2.42
SF3B3Q15393 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.04□□□□□ -2.42
SF3B3Q15393 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.04□□□□□ -2.42
SF3B3Q15393 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.04□□□□□ -2.42
SF3B3Q15393 MIR6759-201ENST00000638110 65 ntBASIC-0.04□□□□□ -2.42
SF3B3Q15393 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.05□□□□□ -2.42
SF3B3Q15393 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.06□□□□□ -2.42
SF3B3Q15393 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.06□□□□□ -2.42
SF3B3Q15393 SNORD56B-201ENST00000384713 71 ntBASIC-0.06□□□□□ -2.42
SF3B3Q15393 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
SF3B3Q15393 MIR548AG1-201ENST00000579932 66 ntBASIC-0.06□□□□□ -2.42
SF3B3Q15393 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.07□□□□□ -2.42
SF3B3Q15393 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
SF3B3Q15393 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
SF3B3Q15393 SNORA32.1-201ENST00000364514 115 ntBASIC-0.08□□□□□ -2.42
SF3B3Q15393 SNORA18.1-201ENST00000363418 128 ntBASIC-0.09□□□□□ -2.42
SF3B3Q15393 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
SF3B3Q15393 MIR1265-201ENST00000408444 86 ntBASIC-0.09□□□□□ -2.42
SF3B3Q15393 MIR4464-201ENST00000580818 92 ntBASIC-0.09□□□□□ -2.42
SF3B3Q15393 SNORA62.4-201ENST00000365504 151 ntBASIC-0.1□□□□□ -2.43
SF3B3Q15393 RNU6-901P-201ENST00000384593 106 ntBASIC-0.1□□□□□ -2.43
SF3B3Q15393 MIR5704-201ENST00000584029 77 ntBASIC-0.1□□□□□ -2.43
SF3B3Q15393 RNU6-92P-201ENST00000605893 104 ntBASIC-0.1□□□□□ -2.43
SF3B3Q15393 SNORA25.5-201ENST00000363782 126 ntBASIC-0.11□□□□□ -2.43
SF3B3Q15393 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.11□□□□□ -2.43
SF3B3Q15393 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.11□□□□□ -2.43
SF3B3Q15393 MIR4280-201ENST00000582178 76 ntBASIC-0.11□□□□□ -2.43
SF3B3Q15393 AL590491.3-201ENST00000610731 82 ntBASIC-0.11□□□□□ -2.43
SF3B3Q15393 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.12□□□□□ -2.43
SF3B3Q15393 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.12□□□□□ -2.43
SF3B3Q15393 SNORD114-12-201ENST00000365400 75 ntBASIC-0.12□□□□□ -2.43
SF3B3Q15393 RNU6-788P-201ENST00000390967 104 ntBASIC-0.12□□□□□ -2.43
SF3B3Q15393 MIR6854-201ENST00000614935 69 ntBASIC-0.12□□□□□ -2.43
SF3B3Q15393 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.13□□□□□ -2.43
SF3B3Q15393 AC110620.1-201ENST00000416042 228 ntBASIC-0.13□□□□□ -2.43
SF3B3Q15393 AC125388.1-201ENST00000459631 156 ntBASIC-0.13□□□□□ -2.43
SF3B3Q15393 MIR8068-201ENST00000618032 68 ntBASIC-0.13□□□□□ -2.43
SF3B3Q15393 MIR6888-201ENST00000621977 67 ntBASIC-0.13□□□□□ -2.43
SF3B3Q15393 AC114755.3-201ENST00000481111 251 ntBASIC-0.14□□□□□ -2.43
SF3B3Q15393 MIR3666-201ENST00000607845 111 ntBASIC-0.14□□□□□ -2.43
SF3B3Q15393 AL445584.3-201ENST00000617173 78 ntBASIC-0.14□□□□□ -2.43
SF3B3Q15393 RNA5SP192-201ENST00000364404 120 ntBASIC-0.15□□□□□ -2.43
SF3B3Q15393 RNU6-669P-201ENST00000365575 107 ntBASIC-0.15□□□□□ -2.43
SF3B3Q15393 SNORA41B-201ENST00000384785 128 ntBASIC-0.15□□□□□ -2.43
SF3B3Q15393 MIR527-201ENST00000385244 85 ntBASIC-0.15□□□□□ -2.43
SF3B3Q15393 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.15□□□□□ -2.43
SF3B3Q15393 SNORD4A-201ENST00000459174 72 ntBASIC-0.15□□□□□ -2.43
SF3B3Q15393 MIR4263-201ENST00000584745 83 ntBASIC-0.15□□□□□ -2.43
SF3B3Q15393 AC108676.2-201ENST00000605225 163 ntBASIC-0.15□□□□□ -2.43
SF3B3Q15393 SNORD60.1-201ENST00000362451 73 ntBASIC-0.16□□□□□ -2.44
SF3B3Q15393 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
SF3B3Q15393 AL445193.1-201ENST00000441183 141 ntBASIC-0.16□□□□□ -2.44
SF3B3Q15393 RNA5SP66-201ENST00000517178 101 ntBASIC-0.16□□□□□ -2.44
SF3B3Q15393 SNORD116-16-201ENST00000384533 92 ntBASIC-0.17□□□□□ -2.44
SF3B3Q15393 RNU6-246P-201ENST00000384702 107 ntBASIC-0.18□□□□□ -2.44
SF3B3Q15393 RNU6-122P-201ENST00000516818 107 ntBASIC-0.18□□□□□ -2.44
SF3B3Q15393 MIR6851-201ENST00000617060 67 ntBASIC-0.18□□□□□ -2.44
SF3B3Q15393 RNU6-458P-201ENST00000384179 107 ntBASIC-0.19□□□□□ -2.44
SF3B3Q15393 U6.58-201ENST00000613107 107 ntBASIC-0.19□□□□□ -2.44
SF3B3Q15393 RNU6-940P-201ENST00000363433 104 ntBASIC-0.2□□□□□ -2.44
SF3B3Q15393 RNA5SP300-201ENST00000391197 107 ntBASIC-0.2□□□□□ -2.44
SF3B3Q15393 AC093726.3-201ENST00000637588 150 ntBASIC-0.2□□□□□ -2.44
SF3B3Q15393 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.21□□□□□ -2.44
SF3B3Q15393 MIR429-201ENST00000362106 83 ntBASIC-0.22□□□□□ -2.44
SF3B3Q15393 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.22□□□□□ -2.44
SF3B3Q15393 RNU6-35P-201ENST00000384530 107 ntBASIC-0.22□□□□□ -2.44
SF3B3Q15393 SNORD38.3-201ENST00000516599 73 ntBASIC-0.22□□□□□ -2.44
SF3B3Q15393 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
SF3B3Q15393 MIR124-2-201ENST00000385081 109 ntBASIC-0.24□□□□□ -2.45
SF3B3Q15393 RNU6-924P-201ENST00000362926 108 ntBASIC-0.25□□□□□ -2.45
SF3B3Q15393 RNU6-320P-201ENST00000516511 106 ntBASIC-0.25□□□□□ -2.45
SF3B3Q15393 MIR466-201ENST00000580653 84 ntBASIC-0.25□□□□□ -2.45
SF3B3Q15393 SNORD114-11-201ENST00000363738 75 ntBASIC-0.26□□□□□ -2.45
SF3B3Q15393 SNORD74.6-201ENST00000364796 70 ntBASIC-0.26□□□□□ -2.45
SF3B3Q15393 MIR214-201ENST00000385214 110 ntBASIC-0.26□□□□□ -2.45
SF3B3Q15393 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.27□□□□□ -2.45
SF3B3Q15393 RNA5SP275-201ENST00000363936 118 ntBASIC-0.28□□□□□ -2.45
SF3B3Q15393 MIR518B-201ENST00000385127 83 ntBASIC-0.28□□□□□ -2.45
SF3B3Q15393 U7.5-201ENST00000517224 61 ntBASIC-0.28□□□□□ -2.45
SF3B3Q15393 SNORD114-31-201ENST00000363219 75 ntBASIC-0.29□□□□□ -2.46
SF3B3Q15393 RNA5SP476-201ENST00000516613 103 ntBASIC-0.29□□□□□ -2.46
SF3B3Q15393 MIR3938-201ENST00000582157 103 ntBASIC-0.29□□□□□ -2.46
SF3B3Q15393 MIR8064-201ENST00000612863 90 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 241.7 ms