Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
NFX1Q12986 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
NFX1Q12986 Y_RNA.134-201ENST00000363435 105 ntBASIC1.24□□□□□ -2.21
NFX1Q12986 RNU1-93P-201ENST00000364704 169 ntBASIC1.24□□□□□ -2.21
NFX1Q12986 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
NFX1Q12986 OR2A41P-201ENST00000473586 105 ntBASIC1.24□□□□□ -2.21
NFX1Q12986 MIR520E-201ENST00000384867 87 ntBASIC1.23□□□□□ -2.21
NFX1Q12986 MIR501-201ENST00000390204 84 ntBASIC1.23□□□□□ -2.21
NFX1Q12986 SNORD115.2-201ENST00000391126 59 ntBASIC1.23□□□□□ -2.21
NFX1Q12986 SNORD19-201ENST00000391191 68 ntBASIC1.23□□□□□ -2.21
NFX1Q12986 RNU6-1232P-201ENST00000516299 86 ntBASIC1.23□□□□□ -2.21
NFX1Q12986 MIR6788-201ENST00000618842 66 ntBASIC1.23□□□□□ -2.21
NFX1Q12986 AL391099.1-201ENST00000624635 187 ntBASIC1.23□□□□□ -2.21
NFX1Q12986 RNA5SP325-201ENST00000363756 130 ntBASIC1.22□□□□□ -2.21
NFX1Q12986 Y_RNA.382-201ENST00000365672 114 ntBASIC1.22□□□□□ -2.21
NFX1Q12986 MIR106A-201ENST00000384870 81 ntBASIC1.21□□□□□ -2.22
NFX1Q12986 RNU6-1133P-201ENST00000410963 100 ntBASIC1.21□□□□□ -2.22
NFX1Q12986 RNA5SP222-201ENST00000411039 105 ntBASIC1.21□□□□□ -2.22
NFX1Q12986 uc_338.36-201ENST00000622331 158 ntBASIC1.21□□□□□ -2.22
NFX1Q12986 RNA5SP517-201ENST00000364724 117 ntBASIC1.2□□□□□ -2.22
NFX1Q12986 RNA5SP67-201ENST00000516422 131 ntBASIC1.2□□□□□ -2.22
NFX1Q12986 PVT1_3.1-201ENST00000620853 95 ntBASIC1.2□□□□□ -2.22
NFX1Q12986 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NFX1Q12986 Y_RNA.423-201ENST00000384057 113 ntBASIC1.19□□□□□ -2.22
NFX1Q12986 MIR6767-201ENST00000637302 66 ntBASIC1.19□□□□□ -2.22
NFX1Q12986 SNORD60-201ENST00000383903 83 ntBASIC1.18□□□□□ -2.22
NFX1Q12986 MIR876-201ENST00000401147 81 ntBASIC1.18□□□□□ -2.22
NFX1Q12986 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
NFX1Q12986 MIR548J-201ENST00000408833 112 ntBASIC1.18□□□□□ -2.22
NFX1Q12986 AL353765.1-201ENST00000605514 183 ntBASIC1.18□□□□□ -2.22
NFX1Q12986 RNU6-973P-201ENST00000364690 107 ntBASIC1.17□□□□□ -2.22
NFX1Q12986 SNORA25.18-201ENST00000607153 114 ntBASIC1.17□□□□□ -2.22
NFX1Q12986 RNU6-1233P-201ENST00000362922 102 ntBASIC1.16□□□□□ -2.22
NFX1Q12986 RNU7-55P-201ENST00000459426 62 ntBASIC1.16□□□□□ -2.22
NFX1Q12986 SNORD114-21-201ENST00000606412 72 ntBASIC1.16□□□□□ -2.22
NFX1Q12986 MIR3925-201ENST00000584674 77 ntBASIC1.15□□□□□ -2.23
NFX1Q12986 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NFX1Q12986 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NFX1Q12986 SNORD118-201ENST00000363593 134 ntBASIC1.14□□□□□ -2.23
NFX1Q12986 MIR643-201ENST00000385267 97 ntBASIC1.14□□□□□ -2.23
NFX1Q12986 AC096531.1-201ENST00000419107 107 ntBASIC1.14□□□□□ -2.23
NFX1Q12986 RNU4-54P-201ENST00000516428 129 ntBASIC1.14□□□□□ -2.23
NFX1Q12986 RNA5SP98-201ENST00000363158 137 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 MIR518A1-201ENST00000385068 85 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 MIR548N-201ENST00000408742 75 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 RNU6-848P-201ENST00000515948 107 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 RNU6-617P-201ENST00000516147 107 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 RNU6-473P-201ENST00000516164 107 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 ACA64.5-201ENST00000516207 127 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 RNU6-1049P-201ENST00000516414 107 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 MIR6755-201ENST00000619993 66 ntBASIC1.13□□□□□ -2.23
NFX1Q12986 SNORA42.1-201ENST00000363515 137 ntBASIC1.12□□□□□ -2.23
NFX1Q12986 RNU6-608P-201ENST00000383927 104 ntBASIC1.12□□□□□ -2.23
NFX1Q12986 SNORA36.2-201ENST00000384004 127 ntBASIC1.12□□□□□ -2.23
NFX1Q12986 MIR608-201ENST00000384820 100 ntBASIC1.12□□□□□ -2.23
NFX1Q12986 MIR760-201ENST00000390220 80 ntBASIC1.11□□□□□ -2.23
NFX1Q12986 RNU6-836P-201ENST00000362920 107 ntBASIC1.1□□□□□ -2.23
NFX1Q12986 MIR124-2-201ENST00000385081 109 ntBASIC1.1□□□□□ -2.23
NFX1Q12986 AP002795.1-201ENST00000534879 84 ntBASIC1.1□□□□□ -2.23
NFX1Q12986 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
NFX1Q12986 SNORA40.8-201ENST00000411034 126 ntBASIC1.09□□□□□ -2.23
NFX1Q12986 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.09□□□□□ -2.23
NFX1Q12986 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
NFX1Q12986 MIR140-201ENST00000385282 100 ntBASIC1.08□□□□□ -2.24
NFX1Q12986 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.08□□□□□ -2.24
NFX1Q12986 SCARNA11.2-201ENST00000517183 154 ntBASIC1.08□□□□□ -2.24
NFX1Q12986 MIR5704-201ENST00000584029 77 ntBASIC1.08□□□□□ -2.24
NFX1Q12986 MIR373-201ENST00000362273 69 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 Y_RNA.129-201ENST00000363392 110 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 Y_RNA.320-201ENST00000365144 102 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 RNU6-900P-201ENST00000384498 102 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 MIR5000-201ENST00000577717 103 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 RN7SL793P-201ENST00000583259 296 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 MIR8068-201ENST00000618032 68 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 MIR5683-201ENST00000636514 76 ntBASIC1.07□□□□□ -2.24
NFX1Q12986 RNA5SP128-201ENST00000365305 116 ntBASIC1.06□□□□□ -2.24
NFX1Q12986 MIR216A-201ENST00000385063 110 ntBASIC1.06□□□□□ -2.24
NFX1Q12986 SNORD71-201ENST00000411292 86 ntBASIC1.06□□□□□ -2.24
NFX1Q12986 MIR6854-201ENST00000614935 69 ntBASIC1.06□□□□□ -2.24
NFX1Q12986 Y_RNA.406-201ENST00000383984 100 ntBASIC1.05□□□□□ -2.24
NFX1Q12986 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
NFX1Q12986 MIR499B-201ENST00000636498 73 ntBASIC1.05□□□□□ -2.24
NFX1Q12986 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
NFX1Q12986 MIR532-201ENST00000385025 91 ntBASIC1.03□□□□□ -2.24
NFX1Q12986 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
NFX1Q12986 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
NFX1Q12986 MIR4698-201ENST00000577795 80 ntBASIC1.03□□□□□ -2.24
NFX1Q12986 MIR6857-201ENST00000613267 93 ntBASIC1.03□□□□□ -2.24
NFX1Q12986 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.03□□□□□ -2.24
NFX1Q12986 RNU6-68P-201ENST00000516576 104 ntBASIC1.02□□□□□ -2.25
NFX1Q12986 Y_RNA.260-201ENST00000364628 101 ntBASIC1.01□□□□□ -2.25
NFX1Q12986 RNA5SP224-201ENST00000365069 126 ntBASIC1.01□□□□□ -2.25
NFX1Q12986 AC108740.1-201ENST00000498629 225 ntBASIC1.01□□□□□ -2.25
NFX1Q12986 RNU6-110P-201ENST00000384508 104 ntBASIC1□□□□□ -2.25
NFX1Q12986 MIR581-201ENST00000384895 96 ntBASIC1□□□□□ -2.25
NFX1Q12986 AL353691.2-201ENST00000443795 59 ntBASIC1□□□□□ -2.25
NFX1Q12986 RNU7-129P-201ENST00000516128 62 ntBASIC1□□□□□ -2.25
NFX1Q12986 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1□□□□□ -2.25
NFX1Q12986 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms