Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 U7.5-201ENST00000517224 61 ntBASIC0.69□□□□□ -2.3
EFEMP1Q12805 MIR3925-201ENST00000584674 77 ntBASIC0.69□□□□□ -2.3
EFEMP1Q12805 MIR6513-201ENST00000621188 64 ntBASIC0.69□□□□□ -2.3
EFEMP1Q12805 snoR1.1-201ENST00000628177 80 ntBASIC0.69□□□□□ -2.3
EFEMP1Q12805 MIR499B-201ENST00000636498 73 ntBASIC0.69□□□□□ -2.3
EFEMP1Q12805 Y_RNA.139-201ENST00000363464 102 ntBASIC0.68□□□□□ -2.3
EFEMP1Q12805 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
EFEMP1Q12805 RNA5SP128-201ENST00000365305 116 ntBASIC0.67□□□□□ -2.3
EFEMP1Q12805 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
EFEMP1Q12805 MIR193B-201ENST00000384907 83 ntBASIC0.67□□□□□ -2.3
EFEMP1Q12805 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
EFEMP1Q12805 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
EFEMP1Q12805 RNU6-974P-201ENST00000384099 108 ntBASIC0.66□□□□□ -2.3
EFEMP1Q12805 MIR876-201ENST00000401147 81 ntBASIC0.66□□□□□ -2.3
EFEMP1Q12805 uc_338.36-201ENST00000622331 158 ntBASIC0.66□□□□□ -2.3
EFEMP1Q12805 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
EFEMP1Q12805 SNORD57-201ENST00000448188 72 ntBASIC0.65□□□□□ -2.31
EFEMP1Q12805 SCARNA11.2-201ENST00000517183 154 ntBASIC0.65□□□□□ -2.31
EFEMP1Q12805 MIR6888-201ENST00000621977 67 ntBASIC0.65□□□□□ -2.31
EFEMP1Q12805 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
EFEMP1Q12805 RNU6-1174P-201ENST00000517278 101 ntBASIC0.64□□□□□ -2.31
EFEMP1Q12805 MIR1273G-201ENST00000577677 100 ntBASIC0.64□□□□□ -2.31
EFEMP1Q12805 MIR4464-201ENST00000580818 92 ntBASIC0.64□□□□□ -2.31
EFEMP1Q12805 RNU6-1204P-201ENST00000363948 107 ntBASIC0.63□□□□□ -2.31
EFEMP1Q12805 RNU6-848P-201ENST00000515948 107 ntBASIC0.63□□□□□ -2.31
EFEMP1Q12805 RNU6-617P-201ENST00000516147 107 ntBASIC0.63□□□□□ -2.31
EFEMP1Q12805 RNU6-473P-201ENST00000516164 107 ntBASIC0.63□□□□□ -2.31
EFEMP1Q12805 SNORD63.1-201ENST00000516178 80 ntBASIC0.63□□□□□ -2.31
EFEMP1Q12805 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.63□□□□□ -2.31
EFEMP1Q12805 RNU6-1049P-201ENST00000516414 107 ntBASIC0.63□□□□□ -2.31
EFEMP1Q12805 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
EFEMP1Q12805 MIR106A-201ENST00000384870 81 ntBASIC0.62□□□□□ -2.31
EFEMP1Q12805 MIR936-201ENST00000401264 98 ntBASIC0.62□□□□□ -2.31
EFEMP1Q12805 AL445584.3-201ENST00000617173 78 ntBASIC0.62□□□□□ -2.31
EFEMP1Q12805 AC010487.4-201ENST00000637027 61 ntBASIC0.62□□□□□ -2.31
EFEMP1Q12805 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
EFEMP1Q12805 RNA5SP98-201ENST00000363158 137 ntBASIC0.61□□□□□ -2.31
EFEMP1Q12805 RNA5SP457-201ENST00000363657 124 ntBASIC0.61□□□□□ -2.31
EFEMP1Q12805 Y_RNA.374-201ENST00000365606 101 ntBASIC0.61□□□□□ -2.31
EFEMP1Q12805 RNU6-1008P-201ENST00000384160 104 ntBASIC0.61□□□□□ -2.31
EFEMP1Q12805 RNU6-1133P-201ENST00000410963 100 ntBASIC0.61□□□□□ -2.31
EFEMP1Q12805 SNORD63.2-201ENST00000516303 64 ntBASIC0.61□□□□□ -2.31
EFEMP1Q12805 AL391099.1-201ENST00000624635 187 ntBASIC0.61□□□□□ -2.31
EFEMP1Q12805 MIR29B1-201ENST00000385015 81 ntBASIC0.6□□□□□ -2.31
EFEMP1Q12805 RNU6-721P-201ENST00000410155 105 ntBASIC0.6□□□□□ -2.31
EFEMP1Q12805 MTRNR2L9-201ENST00000622562 75 ntBASIC0.6□□□□□ -2.31
EFEMP1Q12805 RNU6-822P-201ENST00000362707 106 ntBASIC0.59□□□□□ -2.31
EFEMP1Q12805 SNORD45.2-201ENST00000363552 72 ntBASIC0.59□□□□□ -2.31
EFEMP1Q12805 MIR3170-201ENST00000582699 77 ntBASIC0.59□□□□□ -2.31
EFEMP1Q12805 MIR924-201ENST00000638017 53 ntBASIC0.59□□□□□ -2.31
EFEMP1Q12805 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
EFEMP1Q12805 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
EFEMP1Q12805 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
EFEMP1Q12805 AC108740.1-201ENST00000498629 225 ntBASIC0.58□□□□□ -2.32
EFEMP1Q12805 RNU6-742P-201ENST00000365289 107 ntBASIC0.57□□□□□ -2.32
EFEMP1Q12805 SNORA62.4-201ENST00000365504 151 ntBASIC0.57□□□□□ -2.32
EFEMP1Q12805 RNU6-530P-201ENST00000391180 107 ntBASIC0.57□□□□□ -2.32
EFEMP1Q12805 MIR4711-201ENST00000578274 70 ntBASIC0.57□□□□□ -2.32
EFEMP1Q12805 MIR5704-201ENST00000584029 77 ntBASIC0.56□□□□□ -2.32
EFEMP1Q12805 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.56□□□□□ -2.32
EFEMP1Q12805 SNORD44.1-201ENST00000363202 61 ntBASIC0.55□□□□□ -2.32
EFEMP1Q12805 RNU6-973P-201ENST00000364690 107 ntBASIC0.55□□□□□ -2.32
EFEMP1Q12805 RNU6-1111P-201ENST00000391118 107 ntBASIC0.55□□□□□ -2.32
EFEMP1Q12805 RNU7-55P-201ENST00000459426 62 ntBASIC0.55□□□□□ -2.32
EFEMP1Q12805 U6.103-201ENST00000637085 61 ntBASIC0.55□□□□□ -2.32
EFEMP1Q12805 RNU6-127P-201ENST00000390897 107 ntBASIC0.54□□□□□ -2.32
EFEMP1Q12805 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
EFEMP1Q12805 Y_RNA.613-201ENST00000410726 97 ntBASIC0.54□□□□□ -2.32
EFEMP1Q12805 RNU6-863P-201ENST00000515989 104 ntBASIC0.54□□□□□ -2.32
EFEMP1Q12805 RNU6-1238P-201ENST00000517215 102 ntBASIC0.54□□□□□ -2.32
EFEMP1Q12805 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
EFEMP1Q12805 MIR103A1-201ENST00000362165 78 ntBASIC0.53□□□□□ -2.32
EFEMP1Q12805 Y_RNA.30-201ENST00000362572 97 ntBASIC0.53□□□□□ -2.32
EFEMP1Q12805 Y_RNA.115-201ENST00000363272 98 ntBASIC0.53□□□□□ -2.32
EFEMP1Q12805 MIR548Q-201ENST00000408404 100 ntBASIC0.53□□□□□ -2.32
EFEMP1Q12805 RNU6-732P-201ENST00000516033 103 ntBASIC0.53□□□□□ -2.32
EFEMP1Q12805 MIR8068-201ENST00000618032 68 ntBASIC0.53□□□□□ -2.32
EFEMP1Q12805 MIR6514-201ENST00000622549 70 ntBASIC0.53□□□□□ -2.32
EFEMP1Q12805 RNU6-455P-201ENST00000384681 107 ntBASIC0.52□□□□□ -2.33
EFEMP1Q12805 MIR643-201ENST00000385267 97 ntBASIC0.52□□□□□ -2.33
EFEMP1Q12805 AC096531.1-201ENST00000419107 107 ntBASIC0.52□□□□□ -2.33
EFEMP1Q12805 SNORA68.3-201ENST00000515906 83 ntBASIC0.52□□□□□ -2.33
EFEMP1Q12805 RNA5SP121-201ENST00000516537 101 ntBASIC0.52□□□□□ -2.33
EFEMP1Q12805 RNA5SP330-201ENST00000517096 96 ntBASIC0.52□□□□□ -2.33
EFEMP1Q12805 MIR330-201ENST00000362196 94 ntBASIC0.51□□□□□ -2.33
EFEMP1Q12805 Y_RNA.321-201ENST00000365149 102 ntBASIC0.51□□□□□ -2.33
EFEMP1Q12805 RNU6-900P-201ENST00000384498 102 ntBASIC0.51□□□□□ -2.33
EFEMP1Q12805 RNU6-258P-201ENST00000390884 101 ntBASIC0.51□□□□□ -2.33
EFEMP1Q12805 MIR548H4-201ENST00000408689 111 ntBASIC0.51□□□□□ -2.33
EFEMP1Q12805 MIR8087-201ENST00000612745 78 ntBASIC0.51□□□□□ -2.33
EFEMP1Q12805 MIR124-2-201ENST00000385081 109 ntBASIC0.5□□□□□ -2.33
EFEMP1Q12805 AC104408.1-201ENST00000605241 170 ntBASIC0.5□□□□□ -2.33
EFEMP1Q12805 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
EFEMP1Q12805 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
EFEMP1Q12805 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
EFEMP1Q12805 RNU6-815P-201ENST00000384080 113 ntBASIC0.49□□□□□ -2.33
EFEMP1Q12805 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
EFEMP1Q12805 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
EFEMP1Q12805 RNU6-59P-201ENST00000384787 107 ntBASIC0.48□□□□□ -2.33
EFEMP1Q12805 MIR520D-201ENST00000385002 87 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms