Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL353691.2-201ENST00000443795 59 ntBASIC-1.27□□□□□ -2.61
HMGCS1Q01581 SNORD57-201ENST00000448188 72 ntBASIC-1.27□□□□□ -2.61
HMGCS1Q01581 RNU6-478P-201ENST00000363904 110 ntBASIC-1.28□□□□□ -2.61
HMGCS1Q01581 RNU6-686P-201ENST00000364839 107 ntBASIC-1.28□□□□□ -2.61
HMGCS1Q01581 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.28□□□□□ -2.61
HMGCS1Q01581 SNORA8.1-201ENST00000384250 140 ntBASIC-1.29□□□□□ -2.62
HMGCS1Q01581 RNU6-982P-201ENST00000516216 102 ntBASIC-1.29□□□□□ -2.62
HMGCS1Q01581 MIR3165-201ENST00000579874 75 ntBASIC-1.29□□□□□ -2.62
HMGCS1Q01581 RNU6-755P-201ENST00000364400 103 ntBASIC-1.3□□□□□ -2.62
HMGCS1Q01581 RNU6-604P-201ENST00000390917 100 ntBASIC-1.3□□□□□ -2.62
HMGCS1Q01581 SNORD19-201ENST00000391191 68 ntBASIC-1.3□□□□□ -2.62
HMGCS1Q01581 RNA5SP266-201ENST00000410273 108 ntBASIC-1.3□□□□□ -2.62
HMGCS1Q01581 AC074348.1-201ENST00000426503 132 ntBASIC-1.3□□□□□ -2.62
HMGCS1Q01581 RNU7-134P-201ENST00000458997 64 ntBASIC-1.3□□□□□ -2.62
HMGCS1Q01581 AP002795.1-201ENST00000534879 84 ntBASIC-1.3□□□□□ -2.62
HMGCS1Q01581 MIR6818-201ENST00000621576 65 ntBASIC-1.3□□□□□ -2.62
HMGCS1Q01581 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.31□□□□□ -2.62
HMGCS1Q01581 SNORA63.4-201ENST00000362763 126 ntBASIC-1.31□□□□□ -2.62
HMGCS1Q01581 SNORD45.1-201ENST00000363181 77 ntBASIC-1.31□□□□□ -2.62
HMGCS1Q01581 RNU6-640P-201ENST00000363693 105 ntBASIC-1.31□□□□□ -2.62
HMGCS1Q01581 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.31□□□□□ -2.62
HMGCS1Q01581 MIR29B1-201ENST00000385015 81 ntBASIC-1.31□□□□□ -2.62
HMGCS1Q01581 RNA5SP26-201ENST00000362406 119 ntBASIC-1.32□□□□□ -2.62
HMGCS1Q01581 MIR507-201ENST00000385234 94 ntBASIC-1.32□□□□□ -2.62
HMGCS1Q01581 RNU6-129P-201ENST00000391022 107 ntBASIC-1.32□□□□□ -2.62
HMGCS1Q01581 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.32□□□□□ -2.62
HMGCS1Q01581 RNU4-61P-201ENST00000411243 107 ntBASIC-1.32□□□□□ -2.62
HMGCS1Q01581 RNU7-174P-201ENST00000516248 59 ntBASIC-1.32□□□□□ -2.62
HMGCS1Q01581 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
HMGCS1Q01581 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.32□□□□□ -2.62
HMGCS1Q01581 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.33□□□□□ -2.62
HMGCS1Q01581 SNORD113-1-201ENST00000365321 69 ntBASIC-1.33□□□□□ -2.62
HMGCS1Q01581 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.33□□□□□ -2.62
HMGCS1Q01581 MIR4484-201ENST00000582855 83 ntBASIC-1.33□□□□□ -2.62
HMGCS1Q01581 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.33□□□□□ -2.62
HMGCS1Q01581 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.34□□□□□ -2.62
HMGCS1Q01581 RNU6-32P-201ENST00000383948 107 ntBASIC-1.34□□□□□ -2.62
HMGCS1Q01581 RNU6-147P-201ENST00000383983 107 ntBASIC-1.34□□□□□ -2.62
HMGCS1Q01581 RNU6-13P-201ENST00000384248 107 ntBASIC-1.34□□□□□ -2.62
HMGCS1Q01581 RNU6-12P-201ENST00000384604 107 ntBASIC-1.34□□□□□ -2.62
HMGCS1Q01581 RNU6-41P-201ENST00000384741 107 ntBASIC-1.34□□□□□ -2.62
HMGCS1Q01581 MIR5683-201ENST00000636514 76 ntBASIC-1.34□□□□□ -2.62
HMGCS1Q01581 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.35□□□□□ -2.63
HMGCS1Q01581 RNU6-675P-201ENST00000384236 104 ntBASIC-1.35□□□□□ -2.63
HMGCS1Q01581 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.35□□□□□ -2.63
HMGCS1Q01581 AL606753.1-201ENST00000427435 87 ntBASIC-1.35□□□□□ -2.63
HMGCS1Q01581 AC006160.2-201ENST00000637708 154 ntBASIC-1.35□□□□□ -2.63
HMGCS1Q01581 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.36□□□□□ -2.63
HMGCS1Q01581 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.36□□□□□ -2.63
HMGCS1Q01581 RNU6-458P-201ENST00000384179 107 ntBASIC-1.36□□□□□ -2.63
HMGCS1Q01581 RNU6-844P-201ENST00000517175 102 ntBASIC-1.36□□□□□ -2.63
HMGCS1Q01581 U6.58-201ENST00000613107 107 ntBASIC-1.36□□□□□ -2.63
HMGCS1Q01581 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.38□□□□□ -2.63
HMGCS1Q01581 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.38□□□□□ -2.63
HMGCS1Q01581 SNORD20-201ENST00000384550 80 ntBASIC-1.38□□□□□ -2.63
HMGCS1Q01581 RNU6-576P-201ENST00000390854 102 ntBASIC-1.38□□□□□ -2.63
HMGCS1Q01581 RNU6-587P-201ENST00000391282 106 ntBASIC-1.38□□□□□ -2.63
HMGCS1Q01581 MIR4490-201ENST00000582647 84 ntBASIC-1.38□□□□□ -2.63
HMGCS1Q01581 AC138207.3-201ENST00000585289 166 ntBASIC-1.38□□□□□ -2.63
HMGCS1Q01581 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.39□□□□□ -2.63
HMGCS1Q01581 MIR527-201ENST00000385244 85 ntBASIC-1.39□□□□□ -2.63
HMGCS1Q01581 MIR548Q-201ENST00000408404 100 ntBASIC-1.39□□□□□ -2.63
HMGCS1Q01581 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.4□□□□□ -2.63
HMGCS1Q01581 RNA5SP331-201ENST00000364986 107 ntBASIC-1.4□□□□□ -2.63
HMGCS1Q01581 RNU6-215P-201ENST00000365169 102 ntBASIC-1.4□□□□□ -2.63
HMGCS1Q01581 RPL35AP4-201ENST00000412007 102 ntBASIC-1.4□□□□□ -2.63
HMGCS1Q01581 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.4□□□□□ -2.63
HMGCS1Q01581 AL627230.5-201ENST00000619807 58 ntBASIC-1.4□□□□□ -2.63
HMGCS1Q01581 U4.4-201ENST00000620626 117 ntBASIC-1.4□□□□□ -2.63
HMGCS1Q01581 MIR1297-201ENST00000637311 77 ntBASIC-1.4□□□□□ -2.63
HMGCS1Q01581 RNU6-698P-201ENST00000363523 107 ntBASIC-1.41□□□□□ -2.64
HMGCS1Q01581 RNU6-34P-201ENST00000364874 107 ntBASIC-1.41□□□□□ -2.64
HMGCS1Q01581 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
HMGCS1Q01581 RNU6-919P-201ENST00000516731 104 ntBASIC-1.41□□□□□ -2.64
HMGCS1Q01581 MIR548V-201ENST00000584165 80 ntBASIC-1.41□□□□□ -2.64
HMGCS1Q01581 MIR4320-201ENST00000636981 65 ntBASIC-1.41□□□□□ -2.64
HMGCS1Q01581 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.42□□□□□ -2.64
HMGCS1Q01581 RNU6-696P-201ENST00000390834 107 ntBASIC-1.42□□□□□ -2.64
HMGCS1Q01581 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.42□□□□□ -2.64
HMGCS1Q01581 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.43□□□□□ -2.64
HMGCS1Q01581 MIR8485-201ENST00000401372 91 ntBASIC-1.43□□□□□ -2.64
HMGCS1Q01581 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.43□□□□□ -2.64
HMGCS1Q01581 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.43□□□□□ -2.64
HMGCS1Q01581 MIR664A-201ENST00000626086 82 ntBASIC-1.43□□□□□ -2.64
HMGCS1Q01581 RNU6-380P-201ENST00000410207 107 ntBASIC-1.44□□□□□ -2.64
HMGCS1Q01581 HLA-S-202ENST00000425174 53 ntBASIC-1.44□□□□□ -2.64
HMGCS1Q01581 MTND4LP1-201ENST00000446263 157 ntBASIC-1.44□□□□□ -2.64
HMGCS1Q01581 RNA5SP461-201ENST00000516451 104 ntBASIC-1.44□□□□□ -2.64
HMGCS1Q01581 SNORD113.1-201ENST00000363280 73 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 RNU6-598P-201ENST00000364017 105 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 RNU6-164P-201ENST00000364604 103 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 RNU6-49P-201ENST00000384256 107 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 MIR630-201ENST00000384957 97 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 AC090616.4-201ENST00000448026 115 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 IGLL4P-201ENST00000614590 133 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.45□□□□□ -2.64
HMGCS1Q01581 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.46□□□□□ -2.64
HMGCS1Q01581 AC091912.2-201ENST00000624798 167 ntBASIC-1.46□□□□□ -2.64
HMGCS1Q01581 MIR429-201ENST00000362106 83 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms