Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 MIR892B-201ENST00000401279 77 ntBASIC0.22□□□□□ -2.37
NKX3-2P78367 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.22□□□□□ -2.37
NKX3-2P78367 MIR466-201ENST00000580653 84 ntBASIC0.22□□□□□ -2.37
NKX3-2P78367 AL353803.5-201ENST00000599815 141 ntBASIC0.22□□□□□ -2.37
NKX3-2P78367 uc_338.36-201ENST00000622331 158 ntBASIC0.22□□□□□ -2.37
NKX3-2P78367 SNORD114-5-201ENST00000362928 70 ntBASIC0.21□□□□□ -2.38
NKX3-2P78367 Y_RNA.178-201ENST00000363832 102 ntBASIC0.21□□□□□ -2.38
NKX3-2P78367 SNORD114-9-201ENST00000364370 72 ntBASIC0.21□□□□□ -2.38
NKX3-2P78367 MIR148A-201ENST00000362215 68 ntBASIC0.2□□□□□ -2.38
NKX3-2P78367 RNU6-940P-201ENST00000363433 104 ntBASIC0.2□□□□□ -2.38
NKX3-2P78367 RNU6-455P-201ENST00000384681 107 ntBASIC0.2□□□□□ -2.38
NKX3-2P78367 RNU6-122P-201ENST00000516818 107 ntBASIC0.2□□□□□ -2.38
NKX3-2P78367 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
NKX3-2P78367 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.19□□□□□ -2.38
NKX3-2P78367 Y_RNA.282-201ENST00000364793 102 ntBASIC0.19□□□□□ -2.38
NKX3-2P78367 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
NKX3-2P78367 RNU7-165P-201ENST00000458864 60 ntBASIC0.19□□□□□ -2.38
NKX3-2P78367 RNU7-55P-201ENST00000459426 62 ntBASIC0.19□□□□□ -2.38
NKX3-2P78367 MIR4432-201ENST00000581823 84 ntBASIC0.19□□□□□ -2.38
NKX3-2P78367 MIR527-201ENST00000385244 85 ntBASIC0.18□□□□□ -2.38
NKX3-2P78367 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
NKX3-2P78367 MIR4743-201ENST00000584576 69 ntBASIC0.18□□□□□ -2.38
NKX3-2P78367 snoR1.1-201ENST00000628177 80 ntBASIC0.18□□□□□ -2.38
NKX3-2P78367 RNU6-900P-201ENST00000384498 102 ntBASIC0.17□□□□□ -2.38
NKX3-2P78367 RNU7-159P-201ENST00000459284 62 ntBASIC0.17□□□□□ -2.38
NKX3-2P78367 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.17□□□□□ -2.38
NKX3-2P78367 AL391099.1-201ENST00000624635 187 ntBASIC0.17□□□□□ -2.38
NKX3-2P78367 MIR633-201ENST00000384821 98 ntBASIC0.16□□□□□ -2.38
NKX3-2P78367 AC244250.2-201ENST00000418731 148 ntBASIC0.16□□□□□ -2.38
NKX3-2P78367 RNU6-1079P-201ENST00000362861 110 ntBASIC0.15□□□□□ -2.39
NKX3-2P78367 RNU6-1133P-201ENST00000410963 100 ntBASIC0.15□□□□□ -2.39
NKX3-2P78367 RNU6-973P-201ENST00000364690 107 ntBASIC0.14□□□□□ -2.39
NKX3-2P78367 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
NKX3-2P78367 RNU6-499P-201ENST00000365615 107 ntBASIC0.13□□□□□ -2.39
NKX3-2P78367 RNU6-929P-201ENST00000384429 107 ntBASIC0.13□□□□□ -2.39
NKX3-2P78367 SNORD116-16-201ENST00000384533 92 ntBASIC0.13□□□□□ -2.39
NKX3-2P78367 RNA5SP285-201ENST00000516619 119 ntBASIC0.13□□□□□ -2.39
NKX3-2P78367 Y_RNA.698-201ENST00000516798 118 ntBASIC0.12□□□□□ -2.39
NKX3-2P78367 MIR4464-201ENST00000580818 92 ntBASIC0.12□□□□□ -2.39
NKX3-2P78367 MIR3938-201ENST00000582157 103 ntBASIC0.12□□□□□ -2.39
NKX3-2P78367 MIR655-201ENST00000362159 97 ntBASIC0.11□□□□□ -2.39
NKX3-2P78367 Y_RNA.109-201ENST00000363215 102 ntBASIC0.11□□□□□ -2.39
NKX3-2P78367 AC096531.1-201ENST00000419107 107 ntBASIC0.11□□□□□ -2.39
NKX3-2P78367 MIR5704-201ENST00000584029 77 ntBASIC0.11□□□□□ -2.39
NKX3-2P78367 MIR329-2-201ENST00000385029 84 ntBASIC0.1□□□□□ -2.39
NKX3-2P78367 MIR6888-201ENST00000621977 67 ntBASIC0.1□□□□□ -2.39
NKX3-2P78367 RNU6-458P-201ENST00000384179 107 ntBASIC0.09□□□□□ -2.4
NKX3-2P78367 SNORD56B-201ENST00000384713 71 ntBASIC0.09□□□□□ -2.4
NKX3-2P78367 AC108676.2-201ENST00000605225 163 ntBASIC0.09□□□□□ -2.4
NKX3-2P78367 U6.58-201ENST00000613107 107 ntBASIC0.09□□□□□ -2.4
NKX3-2P78367 MIR8068-201ENST00000618032 68 ntBASIC0.09□□□□□ -2.4
NKX3-2P78367 MIR6759-201ENST00000638110 65 ntBASIC0.09□□□□□ -2.4
NKX3-2P78367 Y_RNA.236-201ENST00000364427 111 ntBASIC0.08□□□□□ -2.4
NKX3-2P78367 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
NKX3-2P78367 RNU6-446P-201ENST00000362827 106 ntBASIC0.07□□□□□ -2.4
NKX3-2P78367 RNU6-829P-201ENST00000363700 112 ntBASIC0.07□□□□□ -2.4
NKX3-2P78367 RNU6-246P-201ENST00000384702 107 ntBASIC0.07□□□□□ -2.4
NKX3-2P78367 AC079150.2-201ENST00000443733 78 ntBASIC0.07□□□□□ -2.4
NKX3-2P78367 RNU6-901P-201ENST00000384593 106 ntBASIC0.06□□□□□ -2.4
NKX3-2P78367 AL445584.3-201ENST00000617173 78 ntBASIC0.06□□□□□ -2.4
NKX3-2P78367 SNORA62.4-201ENST00000365504 151 ntBASIC0.05□□□□□ -2.4
NKX3-2P78367 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
NKX3-2P78367 SNORD49B-201ENST00000365172 72 ntBASIC0.04□□□□□ -2.4
NKX3-2P78367 RNU6-46P-201ENST00000383860 107 ntBASIC0.04□□□□□ -2.4
NKX3-2P78367 AL445193.1-201ENST00000441183 141 ntBASIC0.03□□□□□ -2.4
NKX3-2P78367 RNA5SP476-201ENST00000516613 103 ntBASIC0.03□□□□□ -2.4
NKX3-2P78367 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
NKX3-2P78367 MIR6854-201ENST00000614935 69 ntBASIC0.03□□□□□ -2.4
NKX3-2P78367 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.03□□□□□ -2.4
NKX3-2P78367 SNORD1B-201ENST00000363091 84 ntBASIC0.02□□□□□ -2.41
NKX3-2P78367 RNU6-231P-201ENST00000517122 103 ntBASIC0.02□□□□□ -2.41
NKX3-2P78367 MIR429-201ENST00000362106 83 ntBASIC0.01□□□□□ -2.41
NKX3-2P78367 AC114755.3-201ENST00000481111 251 ntBASIC0.01□□□□□ -2.41
NKX3-2P78367 MIR4280-201ENST00000582178 76 ntBASIC0.01□□□□□ -2.41
NKX3-2P78367 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
NKX3-2P78367 RNU6-598P-201ENST00000364017 105 ntBASIC0□□□□□ -2.41
NKX3-2P78367 RNU6-35P-201ENST00000384530 107 ntBASIC0□□□□□ -2.41
NKX3-2P78367 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.01□□□□□ -2.41
NKX3-2P78367 RNU7-88P-201ENST00000458752 63 ntBASIC-0.01□□□□□ -2.41
NKX3-2P78367 U7.5-201ENST00000517224 61 ntBASIC-0.01□□□□□ -2.41
NKX3-2P78367 U2.18-201ENST00000622185 84 ntBASIC-0.02□□□□□ -2.41
NKX3-2P78367 MIR371B-201ENST00000638082 66 ntBASIC-0.02□□□□□ -2.41
NKX3-2P78367 MIR124-2-201ENST00000385081 109 ntBASIC-0.03□□□□□ -2.41
NKX3-2P78367 SNORD116.2-201ENST00000391251 93 ntBASIC-0.03□□□□□ -2.41
NKX3-2P78367 MTND4LP19-201ENST00000403051 166 ntBASIC-0.03□□□□□ -2.41
NKX3-2P78367 RNU6-172P-201ENST00000411000 93 ntBASIC-0.03□□□□□ -2.41
NKX3-2P78367 SNORD113-4-201ENST00000364802 75 ntBASIC-0.04□□□□□ -2.42
NKX3-2P78367 SNORD114-12-201ENST00000365400 75 ntBASIC-0.04□□□□□ -2.42
NKX3-2P78367 AL590491.3-201ENST00000610731 82 ntBASIC-0.04□□□□□ -2.42
NKX3-2P78367 MIR7110-201ENST00000612638 86 ntBASIC-0.04□□□□□ -2.42
NKX3-2P78367 RNU6-520P-201ENST00000384717 104 ntBASIC-0.05□□□□□ -2.42
NKX3-2P78367 AC104692.1-201ENST00000472406 90 ntBASIC-0.05□□□□□ -2.42
NKX3-2P78367 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.05□□□□□ -2.42
NKX3-2P78367 SNORD38.3-201ENST00000516599 73 ntBASIC-0.05□□□□□ -2.42
NKX3-2P78367 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.06□□□□□ -2.42
NKX3-2P78367 RNU7-119P-201ENST00000459279 63 ntBASIC-0.06□□□□□ -2.42
NKX3-2P78367 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
NKX3-2P78367 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
NKX3-2P78367 RNU6-924P-201ENST00000362926 108 ntBASIC-0.08□□□□□ -2.42
NKX3-2P78367 RNU6-696P-201ENST00000390834 107 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms