Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SNORD54-201ENST00000459159 67 ntBASIC-3.13□□□□□ -2.91
HIST1H3AP68431 AC020661.2-201ENST00000560114 134 ntBASIC-3.13□□□□□ -2.91
HIST1H3AP68431 MIR3675-201ENST00000583661 73 ntBASIC-3.13□□□□□ -2.91
HIST1H3AP68431 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.13□□□□□ -2.91
HIST1H3AP68431 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.14□□□□□ -2.91
HIST1H3AP68431 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.14□□□□□ -2.91
HIST1H3AP68431 RNU6-523P-201ENST00000516304 54 ntBASIC-3.14□□□□□ -2.91
HIST1H3AP68431 SNORD116-10-201ENST00000363791 102 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 RNU6-141P-201ENST00000410499 105 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 AC072026.1-201ENST00000605023 201 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 MIR7978-201ENST00000636158 59 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 SNORD45.1-201ENST00000363181 77 ntBASIC-3.16□□□□□ -2.92
HIST1H3AP68431 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.16□□□□□ -2.92
HIST1H3AP68431 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.17□□□□□ -2.92
HIST1H3AP68431 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.17□□□□□ -2.92
HIST1H3AP68431 SNORA81.3-201ENST00000517283 198 ntBASIC-3.17□□□□□ -2.92
HIST1H3AP68431 RNU6-694P-201ENST00000364071 147 ntBASIC-3.18□□□□□ -2.92
HIST1H3AP68431 RNU6-230P-201ENST00000362457 104 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 RNY1P1-201ENST00000364372 112 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 SNORA8.1-201ENST00000384250 140 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 RNY4P18-201ENST00000391107 89 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 MIR202-201ENST00000362219 110 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 SNORD113-3-201ENST00000364830 72 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 RNU6-172P-201ENST00000411000 93 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 SCARNA23-201ENST00000516060 130 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 RNU6-111P-201ENST00000517179 105 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.21□□□□□ -2.92
HIST1H3AP68431 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.21□□□□□ -2.92
HIST1H3AP68431 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.21□□□□□ -2.92
HIST1H3AP68431 SNORD60-201ENST00000383903 83 ntBASIC-3.22□□□□□ -2.92
HIST1H3AP68431 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.22□□□□□ -2.92
HIST1H3AP68431 RNU6-574P-201ENST00000384265 107 ntBASIC-3.22□□□□□ -2.92
HIST1H3AP68431 RNU6-649P-201ENST00000384463 107 ntBASIC-3.22□□□□□ -2.92
HIST1H3AP68431 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 RNU6-520P-201ENST00000384717 104 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 MIR519C-201ENST00000385053 87 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 MIR125B1-201ENST00000385236 88 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 RNU7-61P-201ENST00000515897 61 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 RNU6-162P-201ENST00000516228 103 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 MIR3128-201ENST00000581957 66 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 RNU4-40P-201ENST00000364351 143 ntBASIC-3.24□□□□□ -2.93
HIST1H3AP68431 MTND4LP1-201ENST00000446263 157 ntBASIC-3.24□□□□□ -2.93
HIST1H3AP68431 AL157777.2-201ENST00000258070 137 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 RNA5SP215-201ENST00000363440 122 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.25□□□□□ -2.93
HIST1H3AP68431 RNU6-772P-201ENST00000516042 105 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 MIR548X2-201ENST00000579776 100 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 MIR548S-201ENST00000581352 82 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.26□□□□□ -2.93
HIST1H3AP68431 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.26□□□□□ -2.93
HIST1H3AP68431 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 RNU6-668P-201ENST00000364180 107 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 RNU6-106P-201ENST00000384405 107 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 MIR548F4-201ENST00000408515 105 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 MIR548N-201ENST00000408742 75 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.28□□□□□ -2.93
HIST1H3AP68431 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.28□□□□□ -2.93
HIST1H3AP68431 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.28□□□□□ -2.93
HIST1H3AP68431 RNA5SP93-201ENST00000362525 114 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 SNORA20.1-201ENST00000364790 130 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 RNU6-904P-201ENST00000516206 101 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.3□□□□□ -2.94
HIST1H3AP68431 SNORD116-18-201ENST00000383961 92 ntBASIC-3.3□□□□□ -2.94
HIST1H3AP68431 RNU6-303P-201ENST00000517091 106 ntBASIC-3.3□□□□□ -2.94
HIST1H3AP68431 RNU6-912P-201ENST00000363800 104 ntBASIC-3.31□□□□□ -2.94
HIST1H3AP68431 RNA5SP173-201ENST00000364857 136 ntBASIC-3.31□□□□□ -2.94
HIST1H3AP68431 RNU6-182P-201ENST00000516970 105 ntBASIC-3.31□□□□□ -2.94
HIST1H3AP68431 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.32□□□□□ -2.94
HIST1H3AP68431 RNU6-624P-201ENST00000363411 107 ntBASIC-3.33□□□□□ -2.94
HIST1H3AP68431 SNORD115-37-201ENST00000363768 82 ntBASIC-3.33□□□□□ -2.94
HIST1H3AP68431 SNORA17.4-201ENST00000391287 132 ntBASIC-3.33□□□□□ -2.94
HIST1H3AP68431 U7.3-201ENST00000616123 62 ntBASIC-3.33□□□□□ -2.94
HIST1H3AP68431 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.34□□□□□ -2.94
HIST1H3AP68431 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.34□□□□□ -2.94
HIST1H3AP68431 SNORD113.1-201ENST00000363280 73 ntBASIC-3.36□□□□□ -2.95
HIST1H3AP68431 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.36□□□□□ -2.95
HIST1H3AP68431 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.36□□□□□ -2.95
HIST1H3AP68431 AC074348.1-201ENST00000426503 132 ntBASIC-3.36□□□□□ -2.95
HIST1H3AP68431 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.37□□□□□ -2.95
HIST1H3AP68431 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 MIR569-201ENST00000385228 96 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 RNU7-107P-201ENST00000459121 61 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 MIR4484-201ENST00000582855 83 ntBASIC-3.38□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms