Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 RNU7-154P-201ENST00000516194 62 ntBASIC-0.04□□□□□ -2.42
PDLIM4P50479 RNU7-174P-201ENST00000516248 59 ntBASIC-0.04□□□□□ -2.42
PDLIM4P50479 RNU6-758P-201ENST00000516292 89 ntBASIC-0.04□□□□□ -2.42
PDLIM4P50479 RNU6-455P-201ENST00000384681 107 ntBASIC-0.05□□□□□ -2.42
PDLIM4P50479 MIR1255B2-201ENST00000408618 67 ntBASIC-0.05□□□□□ -2.42
PDLIM4P50479 AC096531.1-201ENST00000419107 107 ntBASIC-0.05□□□□□ -2.42
PDLIM4P50479 SNORA32.1-201ENST00000364514 115 ntBASIC-0.06□□□□□ -2.42
PDLIM4P50479 RNU6-649P-201ENST00000384463 107 ntBASIC-0.06□□□□□ -2.42
PDLIM4P50479 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.06□□□□□ -2.42
PDLIM4P50479 AP001180.6-201ENST00000584918 159 ntBASIC-0.06□□□□□ -2.42
PDLIM4P50479 RNU6-698P-201ENST00000363523 107 ntBASIC-0.07□□□□□ -2.42
PDLIM4P50479 RNU6-34P-201ENST00000364874 107 ntBASIC-0.07□□□□□ -2.42
PDLIM4P50479 SNORD49B-201ENST00000365172 72 ntBASIC-0.07□□□□□ -2.42
PDLIM4P50479 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.07□□□□□ -2.42
PDLIM4P50479 MIR214-201ENST00000385214 110 ntBASIC-0.07□□□□□ -2.42
PDLIM4P50479 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.07□□□□□ -2.42
PDLIM4P50479 AC114801.3-201ENST00000510231 177 ntBASIC-0.07□□□□□ -2.42
PDLIM4P50479 MIR4432-201ENST00000581823 84 ntBASIC-0.07□□□□□ -2.42
PDLIM4P50479 MIR519A2-201ENST00000384990 87 ntBASIC-0.08□□□□□ -2.42
PDLIM4P50479 MIR517B-201ENST00000385102 67 ntBASIC-0.08□□□□□ -2.42
PDLIM4P50479 SNORD30.1-201ENST00000391309 70 ntBASIC-0.08□□□□□ -2.42
PDLIM4P50479 RNA5SP25-201ENST00000410815 110 ntBASIC-0.08□□□□□ -2.42
PDLIM4P50479 RNU6-542P-201ENST00000516405 103 ntBASIC-0.08□□□□□ -2.42
PDLIM4P50479 AL391099.1-201ENST00000624635 187 ntBASIC-0.08□□□□□ -2.42
PDLIM4P50479 U6.111-201ENST00000636093 83 ntBASIC-0.08□□□□□ -2.42
PDLIM4P50479 SNORA25.4-201ENST00000363666 124 ntBASIC-0.09□□□□□ -2.42
PDLIM4P50479 MIR604-201ENST00000384880 94 ntBASIC-0.09□□□□□ -2.42
PDLIM4P50479 MIR4493-201ENST00000584016 73 ntBASIC-0.09□□□□□ -2.42
PDLIM4P50479 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.09□□□□□ -2.42
PDLIM4P50479 SNORA62.4-201ENST00000365504 151 ntBASIC-0.1□□□□□ -2.43
PDLIM4P50479 RNU6-630P-201ENST00000391258 106 ntBASIC-0.1□□□□□ -2.43
PDLIM4P50479 RNU6-518P-201ENST00000516056 96 ntBASIC-0.1□□□□□ -2.43
PDLIM4P50479 AL353803.5-201ENST00000599815 141 ntBASIC-0.1□□□□□ -2.43
PDLIM4P50479 MIR3666-201ENST00000607845 111 ntBASIC-0.1□□□□□ -2.43
PDLIM4P50479 RNA5SP67-201ENST00000516422 131 ntBASIC-0.11□□□□□ -2.43
PDLIM4P50479 MIR548V-201ENST00000584165 80 ntBASIC-0.11□□□□□ -2.43
PDLIM4P50479 MIR4263-201ENST00000584745 83 ntBASIC-0.11□□□□□ -2.43
PDLIM4P50479 AC108676.2-201ENST00000605225 163 ntBASIC-0.11□□□□□ -2.43
PDLIM4P50479 AL590491.3-201ENST00000610731 82 ntBASIC-0.11□□□□□ -2.43
PDLIM4P50479 snoR1.1-201ENST00000628177 80 ntBASIC-0.11□□□□□ -2.43
PDLIM4P50479 SNORD114-12-201ENST00000365400 75 ntBASIC-0.12□□□□□ -2.43
PDLIM4P50479 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.12□□□□□ -2.43
PDLIM4P50479 SNORD56B-201ENST00000384713 71 ntBASIC-0.12□□□□□ -2.43
PDLIM4P50479 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.12□□□□□ -2.43
PDLIM4P50479 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
PDLIM4P50479 MIR4645-201ENST00000583158 77 ntBASIC-0.12□□□□□ -2.43
PDLIM4P50479 AC005520.4-201ENST00000604337 90 ntBASIC-0.12□□□□□ -2.43
PDLIM4P50479 MIR101-1-201ENST00000362265 75 ntBASIC-0.13□□□□□ -2.43
PDLIM4P50479 SNORD114-28-201ENST00000363610 72 ntBASIC-0.13□□□□□ -2.43
PDLIM4P50479 SNORD114-15-201ENST00000364687 72 ntBASIC-0.13□□□□□ -2.43
PDLIM4P50479 MIR4280-201ENST00000582178 76 ntBASIC-0.13□□□□□ -2.43
PDLIM4P50479 MIR8064-201ENST00000612863 90 ntBASIC-0.13□□□□□ -2.43
PDLIM4P50479 U4.4-201ENST00000620626 117 ntBASIC-0.13□□□□□ -2.43
PDLIM4P50479 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.14□□□□□ -2.43
PDLIM4P50479 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.14□□□□□ -2.43
PDLIM4P50479 RNU6-800P-201ENST00000384473 103 ntBASIC-0.14□□□□□ -2.43
PDLIM4P50479 AL627230.5-201ENST00000619807 58 ntBASIC-0.14□□□□□ -2.43
PDLIM4P50479 AC103706.3-201ENST00000636297 85 ntBASIC-0.14□□□□□ -2.43
PDLIM4P50479 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.15□□□□□ -2.43
PDLIM4P50479 MIR548C-201ENST00000384815 97 ntBASIC-0.15□□□□□ -2.43
PDLIM4P50479 SNORD113-2-201ENST00000391082 72 ntBASIC-0.15□□□□□ -2.43
PDLIM4P50479 MIR4511-201ENST00000582784 87 ntBASIC-0.15□□□□□ -2.43
PDLIM4P50479 RNU6-590P-201ENST00000365039 107 ntBASIC-0.16□□□□□ -2.44
PDLIM4P50479 RNA5SP300-201ENST00000391197 107 ntBASIC-0.16□□□□□ -2.44
PDLIM4P50479 RNA5SP66-201ENST00000517178 101 ntBASIC-0.16□□□□□ -2.44
PDLIM4P50479 MIR4464-201ENST00000580818 92 ntBASIC-0.16□□□□□ -2.44
PDLIM4P50479 MIR6854-201ENST00000614935 69 ntBASIC-0.16□□□□□ -2.44
PDLIM4P50479 RNU6-471P-201ENST00000383944 106 ntBASIC-0.17□□□□□ -2.44
PDLIM4P50479 RPS29P8-201ENST00000445109 171 ntBASIC-0.17□□□□□ -2.44
PDLIM4P50479 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.17□□□□□ -2.44
PDLIM4P50479 MIR6851-201ENST00000617060 67 ntBASIC-0.17□□□□□ -2.44
PDLIM4P50479 RNU6-901P-201ENST00000384593 106 ntBASIC-0.18□□□□□ -2.44
PDLIM4P50479 MIR224-201ENST00000384889 81 ntBASIC-0.18□□□□□ -2.44
PDLIM4P50479 RNA5SP451-201ENST00000410588 110 ntBASIC-0.18□□□□□ -2.44
PDLIM4P50479 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.18□□□□□ -2.44
PDLIM4P50479 AC114755.3-201ENST00000481111 251 ntBASIC-0.18□□□□□ -2.44
PDLIM4P50479 SNORD95.1-201ENST00000364099 68 ntBASIC-0.19□□□□□ -2.44
PDLIM4P50479 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.19□□□□□ -2.44
PDLIM4P50479 MIR630-201ENST00000384957 97 ntBASIC-0.19□□□□□ -2.44
PDLIM4P50479 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.19□□□□□ -2.44
PDLIM4P50479 uc_338.36-201ENST00000622331 158 ntBASIC-0.19□□□□□ -2.44
PDLIM4P50479 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.2□□□□□ -2.44
PDLIM4P50479 SNORD74.6-201ENST00000364796 70 ntBASIC-0.2□□□□□ -2.44
PDLIM4P50479 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
PDLIM4P50479 RNU4-63P-201ENST00000411313 118 ntBASIC-0.2□□□□□ -2.44
PDLIM4P50479 SNORD57-201ENST00000448188 72 ntBASIC-0.2□□□□□ -2.44
PDLIM4P50479 AC139453.2-201ENST00000487255 133 ntBASIC-0.2□□□□□ -2.44
PDLIM4P50479 AL445584.3-201ENST00000617173 78 ntBASIC-0.2□□□□□ -2.44
PDLIM4P50479 MIR6888-201ENST00000621977 67 ntBASIC-0.2□□□□□ -2.44
PDLIM4P50479 MIR409-201ENST00000362237 79 ntBASIC-0.21□□□□□ -2.44
PDLIM4P50479 SNORA13-201ENST00000458790 133 ntBASIC-0.21□□□□□ -2.44
PDLIM4P50479 RNU6-92P-201ENST00000605893 104 ntBASIC-0.21□□□□□ -2.44
PDLIM4P50479 AC093726.3-201ENST00000637588 150 ntBASIC-0.21□□□□□ -2.44
PDLIM4P50479 RNA5SP275-201ENST00000363936 118 ntBASIC-0.22□□□□□ -2.44
PDLIM4P50479 RNA5SP331-201ENST00000364986 107 ntBASIC-0.22□□□□□ -2.44
PDLIM4P50479 RNU6-669P-201ENST00000365575 107 ntBASIC-0.22□□□□□ -2.44
PDLIM4P50479 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.22□□□□□ -2.44
PDLIM4P50479 RNA5SP266-201ENST00000410273 108 ntBASIC-0.22□□□□□ -2.44
PDLIM4P50479 MIR548AG1-201ENST00000579932 66 ntBASIC-0.22□□□□□ -2.44
PDLIM4P50479 MIR5704-201ENST00000584029 77 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms