Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.2□□□□□ -2.44
CLK1P49759 RNA5SP66-201ENST00000517178 101 ntBASIC-0.2□□□□□ -2.44
CLK1P49759 MIR4263-201ENST00000584745 83 ntBASIC-0.2□□□□□ -2.44
CLK1P49759 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.2□□□□□ -2.44
CLK1P49759 RNU6-698P-201ENST00000363523 107 ntBASIC-0.21□□□□□ -2.44
CLK1P49759 RNU6-34P-201ENST00000364874 107 ntBASIC-0.21□□□□□ -2.44
CLK1P49759 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.21□□□□□ -2.44
CLK1P49759 MIR517B-201ENST00000385102 67 ntBASIC-0.21□□□□□ -2.44
CLK1P49759 MIR6851-201ENST00000617060 67 ntBASIC-0.21□□□□□ -2.44
CLK1P49759 MIR6888-201ENST00000621977 67 ntBASIC-0.21□□□□□ -2.44
CLK1P49759 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.22□□□□□ -2.44
CLK1P49759 RNU6-302P-201ENST00000365249 107 ntBASIC-0.22□□□□□ -2.44
CLK1P49759 MIR548V-201ENST00000584165 80 ntBASIC-0.22□□□□□ -2.44
CLK1P49759 MIR6854-201ENST00000614935 69 ntBASIC-0.22□□□□□ -2.44
CLK1P49759 AL445584.3-201ENST00000617173 78 ntBASIC-0.22□□□□□ -2.44
CLK1P49759 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
CLK1P49759 SNORD114-11-201ENST00000363738 75 ntBASIC-0.23□□□□□ -2.45
CLK1P49759 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.23□□□□□ -2.45
CLK1P49759 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.23□□□□□ -2.45
CLK1P49759 SNORA62.4-201ENST00000365504 151 ntBASIC-0.23□□□□□ -2.45
CLK1P49759 SNORD38.3-201ENST00000516599 73 ntBASIC-0.23□□□□□ -2.45
CLK1P49759 RNA5SP457-201ENST00000363657 124 ntBASIC-0.24□□□□□ -2.45
CLK1P49759 RNU6-649P-201ENST00000384463 107 ntBASIC-0.24□□□□□ -2.45
CLK1P49759 RNU6-630P-201ENST00000391258 106 ntBASIC-0.24□□□□□ -2.45
CLK1P49759 SNORD30.1-201ENST00000391309 70 ntBASIC-0.24□□□□□ -2.45
CLK1P49759 RNU6-539P-201ENST00000516665 103 ntBASIC-0.24□□□□□ -2.45
CLK1P49759 U6.111-201ENST00000636093 83 ntBASIC-0.24□□□□□ -2.45
CLK1P49759 AC093726.3-201ENST00000637588 150 ntBASIC-0.24□□□□□ -2.45
CLK1P49759 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.25□□□□□ -2.45
CLK1P49759 MIR630-201ENST00000384957 97 ntBASIC-0.25□□□□□ -2.45
CLK1P49759 AC005520.4-201ENST00000604337 90 ntBASIC-0.25□□□□□ -2.45
CLK1P49759 MIR2909-201ENST00000617113 69 ntBASIC-0.25□□□□□ -2.45
CLK1P49759 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CLK1P49759 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.26□□□□□ -2.45
CLK1P49759 SNORA25.4-201ENST00000363666 124 ntBASIC-0.26□□□□□ -2.45
CLK1P49759 RNA5SP169-201ENST00000517268 117 ntBASIC-0.26□□□□□ -2.45
CLK1P49759 AC108676.2-201ENST00000605225 163 ntBASIC-0.26□□□□□ -2.45
CLK1P49759 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.27□□□□□ -2.45
CLK1P49759 RNU6-542P-201ENST00000516405 103 ntBASIC-0.27□□□□□ -2.45
CLK1P49759 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.27□□□□□ -2.45
CLK1P49759 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.28□□□□□ -2.45
CLK1P49759 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.28□□□□□ -2.45
CLK1P49759 AC114801.3-201ENST00000510231 177 ntBASIC-0.28□□□□□ -2.45
CLK1P49759 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.28□□□□□ -2.45
CLK1P49759 RNU6-246P-201ENST00000384702 107 ntBASIC-0.29□□□□□ -2.46
CLK1P49759 SNORD113-2-201ENST00000391082 72 ntBASIC-0.29□□□□□ -2.46
CLK1P49759 RNU6-800P-201ENST00000384473 103 ntBASIC-0.3□□□□□ -2.46
CLK1P49759 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.3□□□□□ -2.46
CLK1P49759 SNORA41B-201ENST00000384785 128 ntBASIC-0.31□□□□□ -2.46
CLK1P49759 MIR124-2-201ENST00000385081 109 ntBASIC-0.31□□□□□ -2.46
CLK1P49759 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
CLK1P49759 MIR6779-201ENST00000617283 64 ntBASIC-0.31□□□□□ -2.46
CLK1P49759 MIR518B-201ENST00000385127 83 ntBASIC-0.32□□□□□ -2.46
CLK1P49759 SNORD22.1-201ENST00000516331 125 ntBASIC-0.32□□□□□ -2.46
CLK1P49759 MIR4511-201ENST00000582784 87 ntBASIC-0.32□□□□□ -2.46
CLK1P49759 SNORD74.6-201ENST00000364796 70 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 SNORD14C-201ENST00000365382 88 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 RNU6-458P-201ENST00000384179 107 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 MIR214-201ENST00000385214 110 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 MIR527-201ENST00000385244 85 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 SNORD126-201ENST00000459475 77 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 U6.58-201ENST00000613107 107 ntBASIC-0.33□□□□□ -2.46
CLK1P49759 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.34□□□□□ -2.46
CLK1P49759 SNORD116-16-201ENST00000384533 92 ntBASIC-0.34□□□□□ -2.46
CLK1P49759 SNORA13-201ENST00000458790 133 ntBASIC-0.34□□□□□ -2.46
CLK1P49759 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
CLK1P49759 RNU6-92P-201ENST00000605893 104 ntBASIC-0.34□□□□□ -2.46
CLK1P49759 SNORD75.1-201ENST00000408373 60 ntBASIC-0.35□□□□□ -2.47
CLK1P49759 RNU6-721P-201ENST00000410155 105 ntBASIC-0.35□□□□□ -2.47
CLK1P49759 AC103706.3-201ENST00000636297 85 ntBASIC-0.35□□□□□ -2.47
CLK1P49759 RNU6-924P-201ENST00000362926 108 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 MIR196A2-201ENST00000385189 110 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 MIR204-201ENST00000385200 110 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 MIR3179-1-201ENST00000578940 84 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 MIR3179-2-201ENST00000579107 84 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 MIR3179-3-201ENST00000579566 84 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 MIR3179-4-201ENST00000617599 84 ntBASIC-0.36□□□□□ -2.47
CLK1P49759 SNORD60.1-201ENST00000362451 73 ntBASIC-0.37□□□□□ -2.47
CLK1P49759 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.37□□□□□ -2.47
CLK1P49759 RNA5SP275-201ENST00000363936 118 ntBASIC-0.38□□□□□ -2.47
CLK1P49759 U7.5-201ENST00000517224 61 ntBASIC-0.38□□□□□ -2.47
CLK1P49759 SNORD114-14-201ENST00000362723 75 ntBASIC-0.39□□□□□ -2.47
CLK1P49759 SNORA25.5-201ENST00000363782 126 ntBASIC-0.39□□□□□ -2.47
CLK1P49759 RNU6-284P-201ENST00000411105 106 ntBASIC-0.39□□□□□ -2.47
CLK1P49759 AP000533.3-201ENST00000447704 118 ntBASIC-0.39□□□□□ -2.47
CLK1P49759 SNORD18.2-201ENST00000459604 70 ntBASIC-0.39□□□□□ -2.47
CLK1P49759 RNU6-598P-201ENST00000364017 105 ntBASIC-0.4□□□□□ -2.47
CLK1P49759 RNA5SP192-201ENST00000364404 120 ntBASIC-0.4□□□□□ -2.47
CLK1P49759 RNU6-471P-201ENST00000383944 106 ntBASIC-0.4□□□□□ -2.47
CLK1P49759 RNU7-88P-201ENST00000458752 63 ntBASIC-0.4□□□□□ -2.47
CLK1P49759 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.4□□□□□ -2.47
CLK1P49759 MIR429-201ENST00000362106 83 ntBASIC-0.41□□□□□ -2.48
CLK1P49759 SNORD1B-201ENST00000363091 84 ntBASIC-0.41□□□□□ -2.48
CLK1P49759 RNU6-732P-201ENST00000516033 103 ntBASIC-0.41□□□□□ -2.48
CLK1P49759 RNU6-122P-201ENST00000516818 107 ntBASIC-0.41□□□□□ -2.48
CLK1P49759 MIR329-2-201ENST00000385029 84 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 381.2 ms