Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 RNA5SP285-201ENST00000516619 119 ntBASIC-0.38□□□□□ -2.47
VPS41P49754 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.38□□□□□ -2.47
VPS41P49754 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.39□□□□□ -2.47
VPS41P49754 RNU6-668P-201ENST00000364180 107 ntBASIC-0.39□□□□□ -2.47
VPS41P49754 MIR889-201ENST00000401280 79 ntBASIC-0.39□□□□□ -2.47
VPS41P49754 SNORD38.3-201ENST00000516599 73 ntBASIC-0.4□□□□□ -2.47
VPS41P49754 RNU6-895P-201ENST00000384125 103 ntBASIC-0.41□□□□□ -2.48
VPS41P49754 MIR548C-201ENST00000384815 97 ntBASIC-0.41□□□□□ -2.48
VPS41P49754 RNA5SP215-201ENST00000363440 122 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 RNU6-776P-201ENST00000364403 104 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 IGLVI-20-201ENST00000519296 130 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 MIR6888-201ENST00000621977 67 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 MIR4662A-201ENST00000637499 67 ntBASIC-0.42□□□□□ -2.48
VPS41P49754 RNU6-540P-201ENST00000384622 101 ntBASIC-0.43□□□□□ -2.48
VPS41P49754 MIR517B-201ENST00000385102 67 ntBASIC-0.43□□□□□ -2.48
VPS41P49754 MIR548AG1-201ENST00000579932 66 ntBASIC-0.43□□□□□ -2.48
VPS41P49754 AL445584.3-201ENST00000617173 78 ntBASIC-0.43□□□□□ -2.48
VPS41P49754 RNA5SP169-201ENST00000517268 117 ntBASIC-0.44□□□□□ -2.48
VPS41P49754 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.44□□□□□ -2.48
VPS41P49754 RNU6-698P-201ENST00000363523 107 ntBASIC-0.45□□□□□ -2.48
VPS41P49754 RNU6-34P-201ENST00000364874 107 ntBASIC-0.45□□□□□ -2.48
VPS41P49754 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.45□□□□□ -2.48
VPS41P49754 RNU6-320P-201ENST00000516511 106 ntBASIC-0.45□□□□□ -2.48
VPS41P49754 SNORD114-31-201ENST00000363219 75 ntBASIC-0.46□□□□□ -2.48
VPS41P49754 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
VPS41P49754 U4.4-201ENST00000620626 117 ntBASIC-0.46□□□□□ -2.48
VPS41P49754 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.47□□□□□ -2.48
VPS41P49754 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.47□□□□□ -2.48
VPS41P49754 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.47□□□□□ -2.48
VPS41P49754 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
VPS41P49754 MIR548V-201ENST00000584165 80 ntBASIC-0.47□□□□□ -2.48
VPS41P49754 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.48□□□□□ -2.49
VPS41P49754 MIR518B-201ENST00000385127 83 ntBASIC-0.48□□□□□ -2.49
VPS41P49754 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
VPS41P49754 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.49□□□□□ -2.49
VPS41P49754 SNORD74.6-201ENST00000364796 70 ntBASIC-0.49□□□□□ -2.49
VPS41P49754 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.49□□□□□ -2.49
VPS41P49754 SNORA13-201ENST00000458790 133 ntBASIC-0.49□□□□□ -2.49
VPS41P49754 RNU6-871P-201ENST00000516122 100 ntBASIC-0.49□□□□□ -2.49
VPS41P49754 RNU6-638P-201ENST00000516582 104 ntBASIC-0.49□□□□□ -2.49
VPS41P49754 AC108676.2-201ENST00000605225 163 ntBASIC-0.49□□□□□ -2.49
VPS41P49754 MIR6759-201ENST00000638110 65 ntBASIC-0.49□□□□□ -2.49
VPS41P49754 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.5□□□□□ -2.49
VPS41P49754 RNU6-663P-201ENST00000391105 106 ntBASIC-0.5□□□□□ -2.49
VPS41P49754 MIR630-201ENST00000384957 97 ntBASIC-0.51□□□□□ -2.49
VPS41P49754 MIR124-2-201ENST00000385081 109 ntBASIC-0.51□□□□□ -2.49
VPS41P49754 MIR204-201ENST00000385200 110 ntBASIC-0.51□□□□□ -2.49
VPS41P49754 SNORD22.1-201ENST00000516331 125 ntBASIC-0.51□□□□□ -2.49
VPS41P49754 MIR4645-201ENST00000583158 77 ntBASIC-0.51□□□□□ -2.49
VPS41P49754 RNA5SP275-201ENST00000363936 118 ntBASIC-0.52□□□□□ -2.49
VPS41P49754 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.52□□□□□ -2.49
VPS41P49754 MIR196A2-201ENST00000385189 110 ntBASIC-0.52□□□□□ -2.49
VPS41P49754 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.53□□□□□ -2.49
VPS41P49754 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.53□□□□□ -2.49
VPS41P49754 SNORD114-28-201ENST00000363610 72 ntBASIC-0.54□□□□□ -2.5
VPS41P49754 RNU6-246P-201ENST00000384702 107 ntBASIC-0.54□□□□□ -2.5
VPS41P49754 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.55□□□□□ -2.5
VPS41P49754 RNU6-284P-201ENST00000411105 106 ntBASIC-0.55□□□□□ -2.5
VPS41P49754 MIR3179-1-201ENST00000578940 84 ntBASIC-0.55□□□□□ -2.5
VPS41P49754 MIR3179-2-201ENST00000579107 84 ntBASIC-0.55□□□□□ -2.5
VPS41P49754 MIR3179-3-201ENST00000579566 84 ntBASIC-0.55□□□□□ -2.5
VPS41P49754 MIR3179-4-201ENST00000617599 84 ntBASIC-0.55□□□□□ -2.5
VPS41P49754 SNORD113-2-201ENST00000391082 72 ntBASIC-0.56□□□□□ -2.5
VPS41P49754 RNU6-630P-201ENST00000391258 106 ntBASIC-0.56□□□□□ -2.5
VPS41P49754 SNORD30.1-201ENST00000391309 70 ntBASIC-0.56□□□□□ -2.5
VPS41P49754 SNORD75.1-201ENST00000408373 60 ntBASIC-0.56□□□□□ -2.5
VPS41P49754 RNU6-721P-201ENST00000410155 105 ntBASIC-0.56□□□□□ -2.5
VPS41P49754 RNU6-542P-201ENST00000516405 103 ntBASIC-0.56□□□□□ -2.5
VPS41P49754 SNORD114-14-201ENST00000362723 75 ntBASIC-0.57□□□□□ -2.5
VPS41P49754 RNU6-924P-201ENST00000362926 108 ntBASIC-0.57□□□□□ -2.5
VPS41P49754 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.57□□□□□ -2.5
VPS41P49754 MIR8064-201ENST00000612863 90 ntBASIC-0.57□□□□□ -2.5
VPS41P49754 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.58□□□□□ -2.5
VPS41P49754 RNU6-649P-201ENST00000384463 107 ntBASIC-0.58□□□□□ -2.5
VPS41P49754 RNU6-539P-201ENST00000516665 103 ntBASIC-0.58□□□□□ -2.5
VPS41P49754 SNORA25.4-201ENST00000363666 124 ntBASIC-0.59□□□□□ -2.5
VPS41P49754 U6.111-201ENST00000636093 83 ntBASIC-0.59□□□□□ -2.5
VPS41P49754 RNU6-458P-201ENST00000384179 107 ntBASIC-0.6□□□□□ -2.51
VPS41P49754 MIR527-201ENST00000385244 85 ntBASIC-0.6□□□□□ -2.51
VPS41P49754 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.6□□□□□ -2.51
VPS41P49754 SNORD18.2-201ENST00000459604 70 ntBASIC-0.6□□□□□ -2.51
VPS41P49754 AC021146.6-201ENST00000514659 117 ntBASIC-0.6□□□□□ -2.51
VPS41P49754 AC005520.4-201ENST00000604337 90 ntBASIC-0.6□□□□□ -2.51
VPS41P49754 U6.58-201ENST00000613107 107 ntBASIC-0.6□□□□□ -2.51
VPS41P49754 SNORA32.3-201ENST00000384772 121 ntBASIC-0.61□□□□□ -2.51
VPS41P49754 SNORA3B-201ENST00000391305 131 ntBASIC-0.61□□□□□ -2.51
VPS41P49754 AP000533.3-201ENST00000447704 118 ntBASIC-0.61□□□□□ -2.51
VPS41P49754 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.61□□□□□ -2.51
VPS41P49754 MIR5589-201ENST00000579442 60 ntBASIC-0.61□□□□□ -2.51
VPS41P49754 MIR4802-201ENST00000581881 80 ntBASIC-0.61□□□□□ -2.51
VPS41P49754 AP001180.6-201ENST00000584918 159 ntBASIC-0.62□□□□□ -2.51
VPS41P49754 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.63□□□□□ -2.51
VPS41P49754 SNORA41B-201ENST00000384785 128 ntBASIC-0.63□□□□□ -2.51
VPS41P49754 MIR4436A-201ENST00000585278 85 ntBASIC-0.63□□□□□ -2.51
VPS41P49754 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.64□□□□□ -2.51
VPS41P49754 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms